Coregonus clupeaformis (lake whitefish): 121536830
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Entry
121536830 CDS
T08357
Name
(RefSeq) transforming growth factor beta-2 proprotein-like
KO
K13376
transforming growth factor beta-2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04068
FoxO signaling pathway
cclu04110
Cell cycle
cclu04218
Cellular senescence
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121536830
04350 TGF-beta signaling pathway
121536830
04068 FoxO signaling pathway
121536830
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121536830
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121536830
04218 Cellular senescence
121536830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121536830
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121536830
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
121536830
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121536830
BRITE hierarchy
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Motif
Pfam:
TGFb_propeptide
TGF_beta
DAN
Mito_fiss_reg
Motif
Other DBs
NCBI-GeneID:
121536830
NCBI-ProteinID:
XP_041700355
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Position
2:11038784..11046471
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AA seq
420 aa
AA seq
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MWLTHLALLLLLRLAVSAEGLSTCQSVSLDDQKSKRIEAVRGQILSKLRYRSTPEPPAPS
PQPEAVPAEVMLLYNSTRELLKERARQSDSACDRESSEEDYYAKEVQRIDMLKQRMDTNA
VSPPIPSPYYRVVGFDVSVVDRNSSTLVKAEFRIYRAPNPQARTSEQRVEIYQVIKPEEP
TGPSQRYIDSRTVRPQTKGAWLSVDVTDTVKDWLAHRERNLGLKLGVHCPFCTFVPSTNS
IVFNKSEELEARFAGLDDELLQQQVRRPGSGLAKGHVEFSTKTPHLILTLLPSDRVENPG
KKTRKKRATADTTTCSRNSDADCCLRSLYIHFRRDLNWKWIHEPKGYKANFCSGSCSYLW
SADNHYNMILPLYNKLNPEASASPCCVPQDLEPLTIVYFMGRTPKVEQLSNMVVKSCKCH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcacccacctcgccctgctactgctgctccggctggccgtgtccgccgagggc
ctctccacctgccagtcagtcagcctggatgatcagaaatccaagcgcattgaggccgtc
cgcggccagatcctcagcaagctccgctaccggagcacaccggagccccccgcaccgagc
ccacagcccgaggccgtgcccgcggaggtgatgctgctctacaacagcactagagagctg
ctgaaggagcgtgcgcgtcagtccgattccgcgtgcgaccgggagagcagcgaggaggat
tattacgcaaaagaggttcagcgcatagacatgcttaagcagcgcatggacacaaatgca
gtgagccctccaatccccagcccatattacagagtggtggggttcgatgtgagtgttgtg
gacaggaactccagcaccctggtcaaagctgagttcagaatctacagagcaccaaacccc
caggcccgcacctcagagcagagagtagagatctatcaggtgataaagccagaagagcca
acaggcccctcgcagagatacatcgactccagaacagttcgcccacagaccaaaggggcg
tggctttctgtggatgtcacagacactgtgaaggactggctggctcatagagagaggaac
ctgggtttgaagctgggtgttcactgtccgttctgcaccttcgttccctccaccaacagc
atcgtgttcaataagagcgaggagctggaggcgcgcttcgctggtctggatgatgagctg
cttcagcagcaggtgcggaggccggggtcagggctggctaagggccatgtggagtttagt
accaagaccccccacctcatcctcaccctgctgcccagcgacagggtagaaaacccgggc
aagaagacccgtaagaagagggccaccgcagacaccaccacctgctccaggaactcagac
gcggactgctgtctgcggtcgctctacatccacttccgccgggacctgaactggaagtgg
atccatgagccgaagggatacaaggccaatttctgctctggcagctgctcatacctttgg
agcgctgacaaccactacaacatgatcctgccgctatataacaagctgaaccctgaggcg
tctgcctctccgtgctgcgtacctcaggacctggagcctctgaccatcgtttacttcatg
ggccgaacgcccaaggtagagcagctctccaacatggtggtcaagtcctgcaagtgccac
tga
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