Coregonus clupeaformis (lake whitefish): 121536843
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Entry
121536843 CDS
T08357
Name
(RefSeq) chromatin assembly factor 1 subunit B-like
KO
K10751
chromatin assembly factor 1 subunit B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121536843
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
121536843
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WDR55
CAF-1_p60_C
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
B-prop_COPA_B_2nd
eIF2A
Beta-prop_HPS5
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
121536843
NCBI-ProteinID:
XP_041700373
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Position
23:31686955..31698033
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AA seq
628 aa
AA seq
DB search
MKVITCEIAWHNKEPVYSLDFQHNSEGCIHRLATAGVDTTVRLWRVEMGPDGKAVVDFLS
NLARHTKAVNVVRFCPNSELLASGGDDSAILLWKLNDSKEPEQTPSFQEEEDCQLNKESW
SVVKTLRGHIEDVYDISWTRDGNFMVSGSVDNTAIMWDVTKGQKLCIFNDHKSYVQGVTW
DPLGQYVATLSCDRVMRVYSTQSRRKAYSVSKMSSGSAAEGEVKQYRMFHDDSMRSFFRR
LTFTPDGSFLLAPAGCVEAGENITNTTYVFSRKSLKRPIAHLPCPAKATLAVRCCPVYFE
LRTKKGEDGSAQPLPNTFGLPYRLLFAVASEDSIFLYDTQQTLPFGYVSNLHYHTLSDLT
WSRDGSFLAVSSTDGYCSFLSFSPGELGTPLKEPPVLEVVTPGNGPEKKGKKAAAARTVS
PVPKTTESTAPVHPNPKEAPSTPLSSLTSPATPLAPGGEEKKNPGKAKPQPRRITLNTLE
GWGKPSTPKAPAASAPKTPTTASISTLATPQQPSLTPNTPLNPSTPNTPLSPSISQPCLT
PKAQCSSGKTLGPSTPKGPAPRRISLTPFVSRSPAAFTTPSSTEKAKHERPSPPTDPVCQ
PPESKRPKTSTLAGKTGVAPASGSTPNP
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgataacatgtgagattgcgtggcacaacaaagagcctgtctacagtctggac
ttccagcacaactctgagggctgcatacacaggctggccacagcaggagtggacaccact
gtcaggttgtggcgtgtggagatggggcctgatgggaaggctgtggtggacttcctgtcc
aacctggcacggcacaccaaggctgtcaacgtggtgcgcttctgccccaacagcgagctg
ctcgcatctggaggagatgattcagccatcctgctgtggaagctgaacgacagtaaggag
cctgagcagaccccgtcgttccaggaggaggaggattgtcagctcaacaaggagagctgg
agcgtggtcaagaccctgcggggacacattgaggatgtgtatgatatcagctggacccgg
gatgggaacttcatggtctctggttctgtggacaacactgccattatgtgggatgtaaca
aagggtcagaagctgtgcatctttaacgaccataagagctatgtgcagggagtgacctgg
gacccgctgggccagtatgtggccacactcagctgtgacagggtgatgcgtgtgtacagt
actcagagcaggaggaaggcctacagtgtcagtaagatgagctctggatcagctgcggag
ggagaggtgaaacagtaccgaatgttccatgacgacagcatgaggtctttcttcagacgc
ctcaccttcacaccggacggctccttcctgctcgccccagcggggtgtgtggaggcaggg
gagaacatcaccaacaccacctacgtcttctccaggaagagcctcaagaggcccatagct
cacctgccctgccctgctaaagccaccctggctgtacgctgttgccccgtctactttgag
ctgaggaccaagaagggagaggatggcagtgcccagcccctgcccaacacgtttggcttg
ccctacagactgttgtttgctgtggcctccgaggattccatcttcctctatgacactcag
cagaccctacccttcggctacgtctccaacctccactaccacacactcagcgacctcacc
tggtctcgagacggttccttcctggcggtgtcgtctacagacggctactgctccttcctg
tccttctcccctggcgagctgggcacccccctcaaggagccccccgtcctggaggtcgtc
acccctggcaacggccctgaaaagaagggcaagaaggctgcagcggcccgcacggtgtcc
cctgtccccaaaaccacagagagcaccgcccctgttcaccccaaccctaaagaggccccc
agcacccccctatcctccctcacctcccctgccactcctctggcccctggaggagaggag
aagaagaaccctggcaaagccaagccccagccccgtaggatcaccctcaacaccctggag
gggtggggcaagcccagcacccccaaagcgcctgctgctagtgcccccaaaacccccacc
acagccagcatcagcacactcgccaccccccagcagcctagccttacccccaacaccccc
ctcaacccctctacccccaacacccccctctccccctctatatcccagccctgcctcacc
ccaaaggcccaatgcagcagcggtaaaaccctgggccccagcacccctaaaggacccgcc
cccagacggatatctctgactcccttcgtctccagatctccagctgccttcaccacaccc
tcctccacagagaaagccaaacatgaacggccctctccccccactgaccctgtgtgtcag
cccccagagtccaagcggcccaagaccagcaccctggcaggcaagacaggggtggctcca
gcctcagggtccacacccaacccctaa
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