Coregonus clupeaformis (lake whitefish): 121536920
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Entry
121536920 CDS
T08357
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2 isoform X1
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121536920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121536920
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121536920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
Motif
Other DBs
NCBI-GeneID:
121536920
NCBI-ProteinID:
XP_041700495
LinkDB
All DBs
Position
23:complement(2568709..2603221)
Genome browser
AA seq
1625 aa
AA seq
DB search
MEQDTSPGFVASSPPAGAKSKLDTLSKDDLIKFAKKQMAAIQKMKSKCADLETEVDTLKS
QPKGNSGDSIIQELTERMSALLLEKAETQQSAVLLRKENEKIKHREQDAVGKLATLLGEL
DQAKEDHQKKIAALEKSLDASQAKHKEEVEFFQRLLREKEESDREKEREREKEKQRERED
SGESVEAVSRSLESQILSLQTELAAAMERSAQEAAALQEDHQRALTEAQQEVENLREELA
QHSVQHEEELRALEEDFEMERERLLLLQEELSEQLALKDSFLQDVQEEEEEPSGRSSGIA
RMLELSGVSQIDASDGETERGQLRSALEDQQSQNTMLQDELIFLGNVKTELEAELERVRE
EFQTEKEELEFKIEELLMTREVATPDVNMTPNRDLLILATPNRELQEAQAFTQLQLSGPQ
RDPVDSLPASPSSPRQSLSSPVPGADHQSLTLQEQQRLILEVQELRAQCETLAREKSQAV
GECESLARERRQVVAECESLAIDRSQAVAEYERTRDILRGLETELGHRTGDIARQYEAMK
EQGASAVQELQERVTGLTEERDGLVERVRGLDEDRASLLEKVQGLEKRLESFLEQTQAAE
GLKEQLQTSLEEKNALALELKDSVEAQTVLASELKASLEVQTALAVELRVSVEDLIRQNG
EIVSQLQMKESAVQELEETLNVVSTARDITLSALQDREMEVVRLREEREREVEESQGQRE
EVAELQAHIEELEKERSLLKNNLEEVQRERSEKVQGSPGEEVEELQARIEELEKERSLLR
SNLGEVVGDTEALQRDLREMKLVNEKMRTENQELLTQVSQATETLADREREGEVEEEQAE
KERRELQQQLTEKDTVISQLRSEMAGLQSTTQSPVSEENTANVFTEKIALLEKERKEKDE
RMNKIKAVAVKARKELDTSRKEAVSLKEEVEVLKAERERVTSSMKDIIHGAEGYKNLQLD
YDRQTEELDKEREKVEGAEKQISELTKRLNTAVQQHEQLWSEREDLMTGLETLRSTVRQM
EGQTAELHRQTDTLNRDLQAERLLKEQKTKELSSLQKEVEELTVQLRRQKQQSQQTTQEL
EQLRKEAQQSSLLDMEMADYERLVKELNTKLSEKDVCVEELKTQINTHTQQEVSLNQEIE
GLKSQLDQGEDKSSKMKQLLVKTKKDLADTKRQEAIQMMTLASLKGELEAHQQQLENSKI
QYCELTAERHRLQEQLRTLTEQQQRTSSSLQHRLTTLQQEANTAKAELSSVTAEFDSYKV
RVHNVLKQQKNKTSAQSDGDATKQERDQMESMVDQYKAKLQDSQQSLAVSTAELQQLQME
HDTLLERHNKILQETVTKEAELRERLMSLQAEIMSTRTEHAQTVGQLTSQAEAQRSGFRE
QIRHLQDEHRTTVETLQNQMTRLENQLFTLQKQTSPAPVQTSRKPVVDRRPVDQGGMGGL
GLGLSDLQSMAREEGEGMETSETESLSPTHTHLPSLEHLLTSPDPKQEPFVWQVEPTKEE
LNQKLTTATRSMEHMNSLLHETEATNAVLMEQVNLLKSEVRRLERNHEREKSVANLEYLK
NVLLQFIFLQSGSERQALLPVIHTMLQLSPEEKNKLAAIAMGEEEVGGARGSGWTSYLHS
WSGIR
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggacaccagcccagggtttgtggcctcatcacctccagctggcgctaagtca
aagttggacacgctgtccaaggatgacctcatcaagtttgccaagaagcagatggctgcc
atacagaagatgaagtccaaatgtgcagatttggaaacggaggttgacaccctcaagtct
cagccaaaaggcaattcaggtgactccatcatacaggagctgaccgagaggatgagtgcc
ttgctgctggaaaaggctgagacccagcagagtgcagtgttactgcggaaggagaatgag
aagatcaagcaccgggaacaggatgcagtagggaaactggccaccctgctgggagagttg
gaccaggccaaggaagaccaccagaagaaaatagcagccttggagaagagcctggacgca
tcccaagccaaacacaaagaagaagttgaattcttccagaggcttctgagggagaaagaa
gagagtgacagagagaaagagagagaaagagagaaagaaaagcagagagaaagggaagac
tcgggcgagagtgtagaagccgtaagtcgcagcctggagtcacagatcctgagtctgcag
acggagctagctgcagccatggagcggagcgcccaggaggctgcagcgctgcaggaagac
catcagagggcactgacagaggcccagcaggaagtagagaacctgagagaggagttggct
cagcatagtgtgcaacatgaagaggagctgagagctctggaggaggactttgagatggag
agagagagactgctactcctccaagaggagctcagtgagcagctggctctcaaagacagc
ttcctgcaggatgtgcaggaggaagaggaggagcctagtggccgcagctcagggatagcc
aggatgttggagctgtctggtgtaagtcagattgatgccagtgatggagagactgagcgc
ggacagctccgatctgccctggaggaccagcaatcacagaataccatgctgcaagacgag
ctgatcttcctgggcaatgtgaagactgaactggaggcggagcttgagagggtaagggag
gagtttcagacagagaaggaggaactagagtttaagatcgaagagttgctgatgacccgg
gaggttgcgacccctgacgtaaatatgacccctaaccgtgaccttctgatccttgcaacc
cctaaccgtgaacttcaggaggctcaagcgttcactcagcttcagctgagcggcccacag
agagacccagtggacagcctacctgccagcccttctagccccagacagagcctgtctagc
cctgtccctggtgcagaccaccagagcctgaccctgcaagaacagcagagattgatcctg
gaggtccaggagctgagggcccagtgtgagaccttagccagggagaagagccaggccgtg
ggtgaatgtgagtccctagccagagagaggaggcaggtggtggcagaatgtgagtcccta
gccatagacaggagccaggcggtggctgagtacgaacgcaccagagacatcctgagaggc
ctggagactgagctaggtcataggaccggggacatcgccagacagtatgaagctatgaag
gaacagggggcttctgcagtccaggagctacaggagagagtcacagggcttactgaggag
agagatggtctggtggagagggtgagagggttggatgaagacagagcgagcctgctggag
aaggtccagggcctagagaagaggctggagagcttcctggagcagacacaggcagccgag
gggctgaaggagcagctgcagacgtctctggaggagaagaatgcgttagccctcgagcta
aaggactccgtagaggcgcagacagtgttagcctctgagctaaaggcatctcttgaggtg
cagaccgcgttagccgtagagctaagggtttcggtggaggatctgatcaggcagaacggg
gagatcgtctctcagctgcagatgaaggagagtgctgttcaggagttagaggagacactt
aatgtggtgagcacagcgagagacataacactgtcagcactgcaggacagagagatggag
gtggtgaggttgagggaggaaagggagagggaggtggaggagagtcaaggccaaagagag
gaggtggctgagctgcaggctcatatagaggagttagagaaggagaggagcctgctgaag
aataatctagaggaggtgcagagggagaggtctgagaaggtgcaggggagcccaggggag
gaggtggaggagctgcaggctcgtatagaggagctggagaaggagaggagcctcctgagg
agtaatctgggggaggtggtgggagatactgaagctctacagagagacctgagggagatg
aaactggtcaatgagaagatgagaacagagaaccaagaactactgacacaagtcagccag
gctacagagacactggcagaccgagagagggagggagaggtggaggaagaacaggcggag
aaggagaggagagagctacaacagcagctaacagagaaggacaccgtgatatctcagttg
agaagtgagatggctggcttacagtctacaacccagtctcctgtctcagaggagaacaca
gccaatgtgttcactgagaaaattgccctgctggagaaggagcgcaaagaaaaggatgag
aggatgaataagatcaaggcggtggctgtgaaagccaggaaggagctggacaccagcagg
aaagaggctgtgtctctaaaggaggaagtggaggtgttgaaggctgagagagagagggtg
acaagctcaatgaaagacatcatccatggagcagagggatacaagaacttgcagctggac
tacgacaggcagacagaggagctggataaggagagagagaaggtggagggagctgagaaa
cagatctccgagctgaccaagcgactcaacactgccgtacaacagcatgaacaactgtgg
tcggagagagaggacctgatgactgggttggagactcttaggagtacagtgagacagatg
gaaggacagacagcagagctacacagacagacagacaccctgaacagagacctgcaggct
gagagactactgaaggaacagaagacaaaggagctgtcgtcgttgcagaaggaggtagag
gagctgacagttcagctccgcagacagaagcagcagtctcagcagacaacacaggagctg
gagcagctacgcaaggaggcccagcagagctcgttgttggacatggagatggcagactat
gaacgcctggtcaaagaactcaacactaaactgtcagagaaagacgtgtgtgtggaggag
ctgaaaacacagataaacacacacacacagcaagaagtctcactcaaccaggagatcgag
ggtctgaagtcccagcttgaccagggggaggacaagagctccaagatgaaacagctgctg
gtgaaaaccaagaaagacctggctgacaccaagagacaggaagccattcagatgatgacg
ctagcctctctgaagggagagctggaggcacatcaacagcaattggagaacagcaagatc
cagtactgtgaactgactgcggagcgccacagactgcaggagcagctgaggactctgact
gaacaacagcagagaacaagcagctccttgcaacacagactgaccacactacagcaggag
gctaacactgccaaggctgagctgtcatctgtcactgctgagtttgacagctataaggtc
agagttcacaacgtcctcaaacaacagaagaacaaaacctcagcacagagcgacggagac
gccactaaacaggagagggaccagatggagtccatggtggaccagtataaagccaagctg
caggacagtcagcagagtctggccgtgagcactgcagaactacaacagctccagatggaa
catgacacactgctggaacgacacaacaagatactgcaggagaccgtcactaaagaggcc
gaactcagagagagactcatgtctctccaggctgagattatgtcaacgcggacagagcat
gctcagacggtgggtcagctaacctcgcaggccgaggcccagcgctcagggttcagggag
cagatccgccatcttcaggacgaacacagaactacagtagagaccctgcagaaccagatg
accaggctggagaaccaactgtttacactgcagaaacagaccagtccagctccagtccag
accagtcgtaaaccagtggtggaccgccggcccgtggaccaggggggaatgggggggctg
ggcctgggcctcagtgatctccagtccatggctagagaggagggggagggcatggagacc
tccgagacagagtccctgtcacccacacacacacacctaccctcactggaacacctactc
acctccccagaccccaaacaggagccgtttgtgtggcaggtggagccgactaaagaggaa
ttgaatcagaagttgaccacagctacacgcagtatggaacacatgaacagtctactgcat
gagacagaggctaccaatgctgttctgatggaacaggtcaatctgttgaagtctgaagtg
cgtcgtctggagcgtaaccatgagagagagaagagtgtagccaacctggagtatctgaag
aatgtcctcttacagttcatcttcctgcagtcaggcagtgagaggcaggctctactcccc
gtcatacacaccatgttacaactcagccctgaggagaaaaataaactggctgctatcgca
atgggtgaggaggaagtgggaggagctagaggctcaggatggacctcctacttacacagc
tggtcaggcatcagatga
DBGET
integrated database retrieval system
