KEGG   Coregonus clupeaformis (lake whitefish): 121536923
Entry
121536923         CDS       T08357                                 
Name
(RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1
  KO
K12172  E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013  Nucleocytoplasmic transport
cclu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    121536923
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121536923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121536923
   03110 Chaperones and folding catalysts [BR:cclu03110]
    121536923
   04121 Ubiquitin system [BR:cclu04121]
    121536923
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     121536923
Chaperones and folding catalysts [BR:cclu03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Cyclophilin
    121536923
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   121536923
SSDB
Motif
Pfam: Ran_BP1 Zn_ribbon_RanBP Pro_isomerase IR1-M WH1 TPR_2 TPR_1 TPR_14 TPR_8 TPR_CcmH_CycH TPR_16 TPR_7 Zf_1st_IFT121 ARM_TT21_C ANC1_spectrin TarS_linker
Other DBs
NCBI-GeneID: 121536923
NCBI-ProteinID: XP_041700505
LinkDB
Position
23:complement(2498805..2522126)
AA seq 3206 aa
MRRSKAEVERYISSVQSSSPSLKEKPIKGFLFAKLYFEAKEYELAKRHVSAYLTVAERDP
KAHKFLGQLYEREGDINKAVGCYKRSVDLNPAQRDLVLKVAELLVGKTERDSRAEFWVEK
AAKLLPGNPAVFNLKERLLNRQGQQGWNQLFDLLQAELAMRPGDAHINVKLVQLFSSDGR
LEEAVKHCLATEKRGLLKSSLDWYSTVVHTLQEFLAQPSVSSNEKTSRPLQRELLLAHCS
LLRLTLSGKGLQPSIKALGSFDCAMQGLKKTACSVTDDLSGVYVEMRGHLYLHAGTLLLK
MAQERKEQWRAVIDLAALCYLLAYQVPRPKSKVTKGDQSPPQHLELLASDRQSQAGHMLL
NLNPDTHTFVREVVEAFGNRSGQGSLFELLFGLQAPAGTSFIGNDDIRSINTQAPAISDL
IKWDNGSIQLQGGDLQQLCWLGLQWSLLAQRPALRDWLKQLFPRLILETSKLDTNTPESI
CLLDLEVFLCGVVWCSHTQLQERARISSTGQQQLNEPRCLPLPLLRFLSTDRQRDWWDAV
YSLIHKRAAPGMSAKLRMTVQHGLSTLRAGEKHGLQPALPIHWAQHLSSTGVGVNSYYDQ
KEYIGRSVHYWKVVLPLLDKIKRRRSIPEPLDPLFIHFPSRDIQIPSVKGFEEEAMIAFA
TLLDVEGRTEEAVTTLETINNISSNWHLARIFQRLSEEAGSGVEETQDRCIMFLRKFRTY
LSKIYNANADDMDKLPVSMEEVMDLLNDVNQQLGESGEAMDEEEEEGRTVHFSPQFTEPA
ASVSHIKFAPLTPSPSNSFVPPSKRHLISPKTPPHWAEDQKSLLQMLCQQVEALKNEVHD
LRHNSSDSMASPHQRMFGDGYGPDMQEGYPPTQTFHGAPLTVATTQAPSMYFNQSPAYNS
GQYLLRPAANVTPIKPPVYGINRLPPQQHMYAYQQPTNTPPLQSTPACIYPPQDQVFGVP
LRFESPATSLLSPYSEEFYGHSQPTTNPPLPEPGYFTKPSVVPVQPPKSIEGKPVDFGKI
SFGQHVPAEPLTVPSFGAGVVAQSTPSSAAFKFNSNFKSNDGDFTFKAKNSENLLGLLTS
DIPTKFEGPSEVKPPSQGGIFSFGTKSAVGFSFTDAAQSRDKPNLFEKIEQPNSFTDLTK
PVFGLENTAVEKGPESDNDSTHVEEDEDGPHFEPIVPLPDKVDVKTGEEEEEEMFCNRAK
LFRFDAETKEWKERGIGIVKILKHNTSGKVRLLMRREQVLKICANHYITPDMLLKPNAGS
DKSWVWNAIDYADEEPRPEQLAIRYKTADEALLFKTKFEEAQKIVPKFPEKRQDQPGRKE
TSPNSSPPQATNFAAQFAKKDGEWDCDVCCVRNAATIMQCVACQTANPNSPSETNSKPAT
ETKGLTSGAASVRGFTFGFGPDSPKDTSSAGSIGKGFGAFGAQIPSSFTFGTSGTTSIPA
AGFGAQSGKKKETTAEVAAESKPSTIPFSSGFGVQFGKKPGQWECDTCLVRNEEFASSCV
SCQTPNQADKTVVDGAAASMPSTIPFSSGFGVQFGKKPGQWECDTCLVRNEEFASSCVSC
QTPNPTAKSTVEVAPPPKPTVSGFGDLFSKKDRQWDCDTCLVRNDASASKCISCQTPNAS
STPSLGAMFSKQGGQWDCDTCLVRNDGSASQCVSCQAPNAKSTATPSSSSFSFSFESQST
STQPAGTASFKFETPQAESSGPNAAGFSFTMPVPAGGFKFGTQETAKETPPAETQTPASG
SASMFLKNIAEQHRGKEKESGVSVSASVLSVDNTNQDENLLFTGKPNDFSFADLAKNSQG
DFKFKPTDSNFKGFTHAGEQLFTSLQSNQWADTSADQDEEDIYKTEENDDIQFEPVVQMP
EKVDLVTGEEDEQALYSQRVKLFRFDGDISQWKERGVGVLKFLKNATNGRLRVLMRREQV
LKVCANHWITTTMNLKPLAGSNKAWMWLANDFSEGDARLEQLAAKFKTPELAEEFKLKFE
ECQRLLLDIPLQTPHKLVDTGRTAHLIQKAEEMKSGLKDLKSFLTDDKTKIKEDDSQANN
TTASNTSGLIIKPHAESTGPTLEWDNYDLREEALDDSADTSVYASPLASSPIRKNLFCFG
ESTAGFNFSFQPVISPAKSAAKLNQSGVSVDEEQDATLEEEERDGLYFEPVVPLPDLVEI
STGEENENVCFSHRAKLYRYDKDLNQWKERGIGDLKILQNYDTKQVRLLMRRDQVLKICA
NHWVTSSMKLEPMKGAEKAWVWSAVDFAEVAEGNVEQLAVRFKLQDVANSFRDIFDKAKT
AQENEILVTPIASCEAPQEVATAPATGTTVCGQAAVAILEETTRERTELSSETFHTPDSK
ASTSTPHSPLNPSKMVVSPPKFLFGTDSLQKIFGSSLPSSKEDVSSESSKAKDSGRIAQP
SPAFKIPEKGLDFRLFKDNPMAFWTSASSTQFEPPAPPQVKADDDGEVEVVYERQPTAEQ
ALLARELLLPLTFFCYQNEPGNTSDDQTDDEDFETAVKALNGKLYQDPPERKAASAGSAA
QAEIGVEPEAGAEGLYPAVEVVWEKRPTPDEEQKAKTLQLHPTFCGVGGEAEDFKPEDFK
PEDFKPEDFKPEDFKPEDFKPEDFETEDFETEDFETEDAERSSHPVSSEAVSSSTGDTVP
EQQFPDQSPSSQEQAADQSEAEVQSSTAEAEFPAQSVTIQEAEVQTTTEEQQTPDQSHST
PTQTAVSSSGEQAQTPNLSAKPAASAPALVTPLFGFGAQFGKKPGQWECDTCLVRNEESA
SSCVSCQTPNPAASSGEQDPDQSDSIPAATSSSPIDLSTKKTSDSTSTFTTTITHDAPNT
FGSLGLSDLGGEGFSFAELAQNTGGEFSFGKQDSNFSWANAGATLFGAAAPPKAEGGEEG
SDEEDANNLDIDFEPIVSLPEVETKSGEEDEEILFKERTKLYRWERALGQWKERGVGDIK
ILFHPDKRFYRVLMRREQVLKVCANHTICQSMELKPMNTSNQALVWTATDFAEGEGKVEQ
LAAKFKTAELAECFRKTFCECQSRMSQSEASPQMSRVQEHSRDSNPQVYLSITADDEPLG
MVTIELFSHIVPKTAENFRALCTGQKGFGLRNSVFHRIVPDFMCQGGDLTNQDGTGGKSI
YGDKFEDENFDVRHTGPGLLSMANRGRDTNNSQFFITLKKAEHLDFKHVAFGFVREGMDV
VRSMGELGTKTGKPSKKIVITECGQL
NT seq 9621 nt   +upstreamnt  +downstreamnt
atgcggcgaagtaaggccgaagtggaacgctatatttcttcagtacagagttcctctcct
tcactcaaagagaaaccaattaaaggatttttatttgctaaattatacttcgaggctaag
gagtatgaacttgctaaaagacatgtatcggcatatctgactgtggccgagagagatccc
aaagcacacaagttcctgggccagctttatgagagggaaggagatatcaacaaggcagta
ggatgttacaagcggtctgtggacctgaacccagcccagagggacctggttttgaaggtg
gctgagctgctggtcggtaagacagagcgagacagcagagcagagttctgggtggagaaa
gctgccaagttgctgccaggaaaccctgctgtcttcaacctcaaggagcgtctactgaat
cgacagggccagcagggatggaaccagttgtttgacctgctgcaggcagagctggctatg
cgacctggcgatgcccatatcaatgtaaagctggttcagctgttctcttctgatggcagg
ctggaggaggctgtcaaacactgtctggccacagagaagagaggcctgcttaaatccagc
ttggactggtactctactgtagtacacactctacaggagttcctagcccagcccagtgtt
tcatccaatgagaagacgagtagacctttgcagagagagctacttttggcccactgcagc
ctgctgagactgaccctgtcgggaaaaggactgcagcctagcatcaaggccctcgggagt
tttgactgtgcgatgcagggcctgaagaagacagcgtgcagtgtaaccgatgatctgtct
ggggtctatgtggagatgaggggacatctgtacctgcatgctggcactctgctgctgaag
atggctcaggaaagaaaagagcagtggagggctgtcattgacctggctgctctctgctat
ttactggcttaccaggtccccaggccgaagagcaaggtgactaaaggggaccagtctcct
cctcagcatctggagctgctagccagtgacagacagagccaggctggacacatgctgctt
aacctcaaccctgacacacatacctttgtcagagaggtggtggaggcgtttggtaaccgt
agtggtcagggctctttgtttgagcttttgtttgggcttcaggctccggctgggacttcc
ttcattggcaacgacgacatccgctccatcaacacacaggctccagcaatatctgacctc
atcaaatgggacaacggctccatccagctccaaggaggggacctccagcagctgtgttgg
ctgggcctccagtggtctctcctggcccagaggcctgctctgagggactggctcaaacag
ctgttccccaggctcatcctggagacctccaaactggacaccaacacacctgagtccatc
tgcctgctagacctggaggtgttcctgtgtggggtggtgtggtgcagtcacacccagctc
caggagagggccaggatcagttctactggtcaacagcaactcaatgagccccgctgcctg
cccctgcccctcctccgcttcctttccacagacagacagagggactggtgggacgccgtc
tacagcctcatacataaacgagctgcgcctggcatgtcagccaaactaaggatgactgtt
caacatggactaagcaccctgcgagctggagagaaacatggccttcaaccagccctgccc
atacactgggcccagcacctcagctcaacgggggttggtgtgaactcctactatgaccag
aaggagtacatagggcgtagtgtccactactggaaggtggtgctccccctgctggacaag
atcaagcggagacgcagcatccctgaacccctggaccccctcttcatacacttcccctct
agagacatacagatcccatcagtgaagggctttgaggaggaggccatgatagcgtttgcg
accctcttggacgtcgaggggaggacagaggaggctgtcactaccctggagacaatcaac
aacatctcatctaactggcacctagctaggatcttccagcgtctgtctgaggaggccggt
agcggggtggaggagactcaggacaggtgcatcatgttcctcaggaagtttagaacttac
ctgtccaagatctacaacgccaacgctgacgacatggacaagctgcccgtttcaatggaa
gaggtgatggatctcctgaacgatgtgaaccagcagctaggggagagtggagaagcaatg
gatgaagaggaggaagagggcagaacggtccacttcagcccacagtttactgagcctgct
gcctcagtctctcacatcaaattcgcccctttaaccccctcccccagcaacagctttgtc
cctccctccaaaagacacctgatttcccccaagacgccacctcattgggcggaggaccag
aagtccctcctgcagatgctctgccagcaggtggaagcccttaagaatgaggtccatgac
ctgagacataactcgtcagacagcatggcgtcaccccaccaaaggatgtttggagatggg
tatgggcctgacatgcaggagggctaccccccaacacagaccttccatggagcacccctc
accgttgccaccacacaggccccttctatgtatttcaatcaatcccctgcttataactcc
ggacagtatctccttcgtcctgcagccaatgttaccccaataaagcctcctgtgtatgga
atcaaccgcctgccaccccagcagcacatgtatgcgtaccagcagcccactaacacacct
cccctgcagtcaacaccagcctgcatctaccctcctcaagaccaggtctttggtgtcccc
ctccgcttcgagtcaccagcaaccagtctactctccccatacagtgaggaattctacggc
cactctcagcccaccaccaaccctcccctccctgagcctggctacttcaccaagccctca
gttgtacctgttcaaccaccaaagagcattgaggggaagcctgtggactttgggaagatc
tcctttggccagcatgtccctgctgagcctcttacggtgcctagctttggtgctggagta
gttgcccagtccactccatcatctgctgcctttaaattcaactccaacttcaaatccaat
gatggggacttcaccttcaaggccaaaaacagtgagaacctgttggggcttctgacgtca
gacattcccactaaatttgagggcccttcagaggtgaagcctcctagccagggagggata
tttagctttggcactaaaagcgcagtaggcttctccttcactgatgcagcccagagtcgg
gacaaaccaaacctgtttgaaaaaattgaacagccaaatagtttcactgatctgaccaag
ccggtatttgggctggaaaacacagcggtggagaaaggaccggagagcgataacgacagc
actcatgtggaggaggatgaggatgggcctcactttgagcccattgtgcccctccctgac
aaggtagatgtgaagactggagaggaggaagaagaggagatgttctgtaacagggccaag
ctgttcagatttgatgcagagactaaagagtggaaggagaggggcatcggcatagtcaaa
atcctaaagcacaatacatcagggaaagtgcgtctgctaatgaggagggagcaggttctg
aagatctgtgctaaccactacatcacgccagatatgctccttaaaccaaatgctggctct
gacaagtcctgggtctggaatgccattgattatgcagatgaggaaccaaggcctgagcaa
ctggccatccggtacaaaacggcagacgaggcattgctcttcaaaacaaagtttgaagag
gctcagaagatcgttcccaaatttccagaaaagcggcaagatcagccaggtaggaaagaa
acttctcctaattcatctcctcctcaggcgacaaactttgctgcccagtttgcaaagaag
gacggggagtgggattgcgacgtgtgctgtgtaagaaatgctgctacaattatgcagtgt
gttgcctgtcagacagccaaccctaattccccgtcagagaccaacagcaaaccggctact
gaaaccaaaggcttgactagtggggcagcttcagtgagaggatttacttttggatttgga
cctgactcgccaaaagacaccagcagcgcaggatctattggaaagggatttggggctttt
ggagctcaaataccctcctcctttacttttggaacgagtggcaccacttctatacctgct
gctggttttggagcccagtctggtaagaagaaagaaaccacagcagaagtagcagcagaa
tcaaagccctcaaccattccatttagttctggatttggagtgcagtttggcaaaaagcca
gggcagtgggagtgtgacacatgtcttgttagaaatgaggaatttgcaagcagttgtgtt
tcttgtcaaactccaaaccaagcagacaaaactgttgtagatggagcagcagcatcaatg
ccctcaaccattccatttagttctggatttggagtgcagtttggcaaaaagccagggcag
tgggagtgtgacacatgtcttgttagaaatgaggaatttgcaagcagttgtgtttcttgt
caaactccaaatcccactgcaaaatcaacagtagaggtagcaccaccaccaaagccaaca
gtgtcgggctttggtgatcttttttctaagaaggacagacaatgggactgtgatacctgt
ctagtgaggaatgatgcatcagcctctaagtgtatttcctgccagacacccaatgctagc
agcaccccctctcttggggccatgttttccaaacaggggggacagtgggactgtgacaca
tgtctagtcagaaacgacggctctgctagtcaatgtgtctcctgtcaggcacccaatgct
aagagcacagccaccccctccagctcatccttcagctttagctttgaaagtcaaagtaca
tctactcagcccgcaggcactgcatccttcaagtttgagacccctcaggctgaaagcagt
ggccccaatgctgcaggcttctctttcaccatgcccgtcccagcaggtggctttaagttt
ggcactcaggaaactgcaaaggaaaccccaccagctgaaactcagactcctgcttcaggg
tctgcgtccatgttcctgaagaatatcgcagagcagcacagagggaaagagaaggaatct
ggcgtcagtgtatctgcatcagtgctgtcggtggacaacaccaatcaggatgagaatctc
ctcttcactggcaaacccaatgacttcagttttgcagatttggctaagaactcacaagga
gacttcaagtttaaaccgaccgactccaatttcaaaggcttcacccatgctggcgagcag
ctgttcacatcccttcagtcaaaccagtgggcagacacatctgctgaccaggatgaagag
gacatatacaaaacagaggagaatgacgatatccagtttgagcctgtggtccagatgcct
gagaaagtggacctggtcacaggagaggaggatgaacaggccctttactcacagagagta
aagctcttcaggtttgacggagacatcagccagtggaaggagaggggtgttggggtcctc
aagttcctgaagaacgccaccaacggcaggttgagggtgctgatgaggagagagcaggtc
ctgaaggtgtgtgccaaccactggatcaccaccaccatgaacctgaagcccttggctggc
tccaacaaagcctggatgtggctggctaatgacttctcagaaggagatgccagactggag
caactcgccgccaagtttaaaaccccagagctggctgaggagttcaagctgaaatttgag
gagtgtcagaggctcctgttggacatcccactgcagactcctcacaagcttgtcgacaca
ggcagaactgcacatctcatccagaaggcagaggagatgaagtctggtctgaaagacctt
aaatccttcctgactgatgacaaaacaaagatcaaggaggacgacagccaagctaacaac
acgacagccagtaacacctcaggtctgatcatcaagccccacgcggagagcactggccct
accttagaatgggacaactatgacctgagagaggaggctctggacgacagtgctgacaca
tctgtctacgcctcacccctagcaagcagcccaatcaggaagaacctcttctgctttgga
gaatccacagctggctttaacttcagcttccagcctgtcatcagtcctgccaagtcggcg
gccaagctgaaccagagcggggtgtctgtggacgaggagcaggacgcgaccctggaggag
gaggagagggatggcttgtactttgagcctgtggttcccctgccagacctggtggagatc
tccactggagaggagaatgaaaacgtatgtttcagccacagagcaaagctgtaccgctat
gacaaagacctgaaccagtggaaggagaggggcatcggagacctcaagatactgcagaac
tacgacaccaaacaagtcagactcctcatgaggcgggaccaagtcctgaagatctgcgcc
aaccactgggtcacatcttctatgaagttggagcccatgaagggtgctgagaaggcctgg
gtctggagtgctgttgactttgctgaggtagcggagggaaatgtggaacagttagcggtg
aggttcaaactgcaggatgtagccaactccttcagagacatctttgacaaagctaaaacc
gcccaggagaatgagattctggtcactcccatagcctcctgtgaggcccctcaggaggta
gcaacagctccagccacagggacgacagtgtgtggacaggctgctgtggccatcctggag
gagaccaccagagaacggactgagctgtcttctgagactttccacacccctgacagcaag
gcctccacttccacaccacacagccctctcaacccctctaagatggtggtgtctcctccc
aagttcctcttcggaaccgactctctccagaagatcttcggcagcagcctcccgtcgtcc
aaggaggatgtttcttcagagagctcgaaggctaaagacagcggtcggatcgcccagccc
tcacctgcattcaaaatcccagaaaagggattggattttaggcttttcaaagataaccca
atggctttttggaccagcgcctcatccacccaatttgagcccccagcacccccccaggtg
aaggctgatgatgacggtgaggtggaggtggtgtatgagaggcagccgactgcggagcag
gctcttctggccagggaactcctgctgcctctcaccttcttctgctaccagaatgaacca
ggaaacactagcgacgaccagacagacgatgaggactttgagacagcagttaaagccctg
aatggaaaactgtaccaggatcctcctgagagaaaggctgcaagtgcaggttctgcagct
caggcggagattggtgttgagcctgaggcaggtgctgagggtttgtacccggcggttgag
gtggtgtgggagaagaggcctactccagatgaggagcagaaagccaagaccctgcagctg
catccaactttttgtggtgtaggcggcgaggcagaggactttaagccagaggactttaag
ccagaggactttaagccagaggactttaagccagaggactttaagccagaggactttaag
ccagaggactttgagacagaggactttgagacagaggactttgagacagaggacgcagag
agaagctcacacccagtttcatctgaggctgtgtcctccagcaccggcgacacagtgcca
gaacaacagttcccagaccagtcccccagcagccaagaacaggctgcagatcagtctgag
gcagaggttcagtcctctactgcagaggctgagttcccagctcagtcggtaaccatccag
gaggcagaggtccagaccactacagaggagcagcagactcctgatcagtcacactccact
ccaactcagactgcagtctctagcagtggggagcaggctcaaactccaaacctttcagca
aaacctgctgctagtgccccagctttggtgacccccttatttggatttggtgcacagttt
ggcaaaaagccagggcagtgggagtgtgacacatgtcttgttagaaatgaggagtctgca
agcagttgtgtttcttgtcaaactccaaaccctgcagccagcagtggtgagcaggatcca
gatcagtcagactctattcctgcagctaccagcagcagccccatagacctgtctaccaag
aagacctctgactccacgtcgacatttactacaaccattactcatgatgctcctaacaca
tttggctccttgggcttgagtgatctgggaggggaagggttctccttcgctgaactggca
cagaacaccgggggtgaattctccttcggaaaacaagattctaacttctcgtgggcgaat
gccggtgctacgttgtttggagctgcagccccacccaaagctgagggaggggaggagggg
agcgatgaagaggacgctaataatctggacattgactttgaacccatagtctccctacca
gaggtggagactaagtcaggggaggaggatgaggagatcctgtttaaggagcgtaccaag
ctgtaccgctgggagagagccctgggccagtggaaggagaggggtgtgggcgacatcaag
atcctcttccaccctgataagaggttctaccgggtgctgatgaggagggagcaggtgctg
aaggtgtgtgccaatcacaccatctgccagagcatggagctcaaacccatgaacacctcc
aaccaagcccttgtctggaccgctactgactttgcagagggtgagggtaaggtggagcag
ttggcagccaagttcaagacagcagagctggctgagtgtttcaggaaaaccttctgtgag
tgtcagagccgtatgagccagtcagaggcctccccccagatgtccagggtccaggaacat
tctagagactccaacccccaggtgtacctctcgatcaccgctgacgacgagcccctggga
atggtcaccatagaactgttctctcacattgtccccaagactgctgagaacttcagagcg
ctgtgtacaggacagaaaggcttcgggctgcgcaactctgtcttccacaggatcgttccg
gacttcatgtgtcagggtggagacctcaccaaccaggacgggacaggagggaagtccatc
tacggggacaagtttgaggacgagaactttgatgtgcgccacacgggcccagggctgctg
tccatggccaatcgcggccgagacaccaacaactcccagttcttcatcacactgaagaag
gctgagcacctggacttcaaacacgtggcctttggcttcgtcagagagggcatggatgtg
gtccgcagcatgggagagctgggcaccaagactggcaaacccagcaagaagattgtcatc
actgaatgtggacaactatag

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