Coregonus clupeaformis (lake whitefish): 121536959
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Entry
121536959 CDS
T08357
Name
(RefSeq) TBC1 domain family member 8-like isoform X2
KO
K19951
TBC1 domain family member 8/9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121536959
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121536959
Endosome - Golgi transport
Rab GTPases and associated proteins
121536959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
EF-hand_1
Ty3_capsid
Motif
Other DBs
NCBI-GeneID:
121536959
NCBI-ProteinID:
XP_041700565
LinkDB
All DBs
Position
23:40141467..40162333
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AA seq
1142 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTEKSNDFFILQRRRGHGDSGGKFTGLLVGALDSVLDSNARVT
PFRILLQVPGSQVSWTIACGAAVGEMNRHWDWLVQNLLHSLSVFENKEDVASFVKGKVKG
LIAEEVRGKQAAQEEEPEKFREALLKFELCFGLPSSEKLVTTYSCCCWKGRVPRQGWLYL
SINHMAFYSFLLGKEVKFVIPWAEVTRLERVSTGLMTDMVRVTTRRCQRDFSMFLSLDEA
FGVIGQLADIALRRLLDSEGLELDRVLQQSSNITKRVLEEQALRAYVLALFRLPRGERLQ
EVALCSVWTPHARCHTAGTLYTTDSYLCFASREEGQCSLLISLSEVISIEKAESTSLLPN
PVIVSVRSKKAFQLMELQDRDSLVDSLTSRLRSLQWKHSMFRSKKSLTSSSPYYTFYYDT
MYCDGEEIEERPLRQTVNTEALMACYHHSQPDPNNSTATMEQVKERLWDDHFSEYGRGVH
MFRTEKIQKLVAMGIPESLRGELWMTFSDASSELSSHPDYYSGLVTESMGQSSLATEEIE
RDLHRSLPDHPAFQNVTGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYTKEEEAFS
LLVAVCERMLPDYFNRRVIGAQVDQSVFEELIRDRLPELAEHIPDLSPLSSISLSWFLTL
FLSVLPFRSAVCVVDCFFFHGIKAIFQLGLAVLDANATALCASADDGQALMILTGFLDQV
KYDEDPSPPATHPLSSQSGEEEGSLPVEQHTLITDLIADSYEKFGDLTVRQIEKLRCRHR
IQVLQAHEDTTKENALRVVTPDVSLSPENLADVYDLFRTEHFINLYWGDGGTTVALQHHD
PGRPYVEQYRVDRAQFKSLYMLLVPWLCGLHTDTVAHRTFTLLDQDRDSLITFREFAGWL
DTLYCVELNEKVRLLYRLHIPPALTESEDDPSPLKSPLLSTTRPLHVELPNGEIRDFQEQ
LKQMLKDLAKEKEKDVEQPLPPMNQREFIQFCKTLYSMFHGNPDENELFQAIATVTSLVL
QIGEVDHRSRCSGSEVSSEGGAGDEVEDDHKEGSQEDHPVFSTKEEEGGGGERKEGTSKS
SGSESQSEWTVSYAQILASLLTEQQLVNFFEKPMDLSAKVAEAKVKQYHERAGLLMLQQG
TS
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgaatccagaggaagttttgctgaaaaatgcactgaagctttgggttaccgaa
aaatctaacgatttcttcattttgcagcgcagaagagggcatggggattcaggggggaaa
tttacaggtcttctagtgggagctctggactcagtgctggactccaacgcccgggtcaca
ccgttccgtatcctgctacaggtgcctgggtcacaggtcagctggaccatagcttgtggt
gctgctgtcggagagatgaacagacattgggactggctggtccagaacctactccactct
ctctcagtgtttgagaacaaggaggatgtcgctagcttcgtcaaagggaaagtcaagggt
ctgatagcggaggaggtaagggggaaacaggcggctcaggaggaggagcctgagaagttc
cgggaggcgctgctgaagtttgagctatgtttcggcctgccctcctcagagaagctggtc
accacctactcttgctgctgctggaaggggcgggtcccccggcagggctggctctacctc
agcatcaaccacatggccttctactccttcctgttgggaaaggaagtgaagtttgtgatc
ccgtgggcggaggtgacgaggctggagcgggtctccacgggcctcatgacagacatggtg
cgtgtgacaacgcgacggtgccagcgagacttctccatgttcctgagcctggatgaggcg
ttcggggtcattggtcagctggctgacattgccctgcgacgcctgctggacagcgaaggc
ctggagctggaccgagtcctccagcagtcctccaacatcaccaagagggttctggaggag
caggcgttgagggcgtatgtcctggctctatttcggctaccgcggggcgaacgtcttcag
gaggtggcgctgtgttcagtgtggacgccccatgcccgctgtcacacggcaggaacgctc
tacaccaccgacagctacctatgcttcgccagccgagaggagggccaatgcagcctgctt
atctctctctcagaggtgatctccatagagaaggcggagagcaccagcctgctgcccaac
ccagtgatcgtcagcgtgaggagtaagaaggccttccagctgatggagctgcaggacaga
gacagcctggtggacagcctgacatcacgcctcagatccctgcagtggaaacactccatg
ttccgcagcaagaaatctctgacctcttcgtctccctactacaccttctactatgacacc
atgtactgtgacggggaggagatcgaggagagaccactacgtcaaacagtgaacacagag
gctctgatggcatgctaccatcactctcaacctgaccccaacaacagcacggctaccatg
gagcaggtgaaagagcgtctgtgggatgaccacttctcggagtacggtcgaggcgtccac
atgttccgcacagagaagatccagaagctggttgccatggggataccagagtcgctacgg
ggagagctatggatgaccttctctgatgcctcgtcagagttgtcatcccacccagactac
tactcggggctagtgacggagtctatggggcaaagcagtctggccacggaggagatcgag
agagacctgcaccgctcgctgcccgaccaccctgccttccagaacgtcacgggcatcgcg
gcgctgcgccgcgtcctcaccgcatatgcccaccgcaaccccaagattggctactgccag
tcaatgaatatcctggcatctgtgctgctgctgtacactaaagaggaggaggccttctca
ctgctagtggctgtgtgtgagaggatgctacctgactacttcaaccgcagagtcataggt
gctcaggtggaccagtcagtgtttgaggagctgatccgggatcgtcttcccgagctggcc
gagcacattcccgacctctcccccctctcttccatctccctgtcctggtttctcaccctg
ttcctcagcgtgcttcccttccgcagcgctgtctgtgtggtagactgcttcttctttcac
ggcatcaaagccatcttccagctggggctagctgtgctggatgctaacgctacggcgctg
tgtgctagtgcagatgacggccaggccctcatgatcctcactggttttctggaccaggtg
aagtacgatgaagatccgtctccccctgccactcaccctctctcgtctcagagtggggag
gaggagggcagcctgcctgtagaacaacataccctgatcactgacctcattgctgactcc
tatgagaaatttggagacctgacggtgagacaaatagagaagttgcgatgcagacaccgg
atccaggttctccaagcacacgaggacaccaccaaggagaatgcgctcagggtggtgacc
ccagatgtctctctctcccctgaaaacctggctgatgtctacgacctcttcaggacagag
cacttcatcaacctgtactggggcgatgggggcaccacagtggccctccagcaccatgac
ccaggccggccctatgtggagcagtacagagtggaccgggcccagtttaagagcctgtac
atgctgctggttccctggctttgtggcctccatactgacactgtggcccaccggaccttc
acactactggaccaggacagagactcactcatcaccttcagagagttcgctgggtggctg
gatacgctatactgtgtggaactgaatgagaaggtcagactactgtatcgtttgcacata
cctccagctctgactgagagtgaggatgacccgtctccactgaagagccctctgctgtca
actaccagaccactccatgtagagctgcccaatggggagataagagactttcaggagcag
ttgaagcagatgctgaaagacctggctaaagagaaggagaaggatgtggagcaaccttta
cctccaatgaaccagagggagttcatccagttctgtaagaccctctacagcatgttccat
ggcaacccagacgagaacgagctcttccaggccatcgctacagtgaccagcctggtgctg
cagatcggcgaggtcgaccaccgcagccgctgctcggggtcagaggtcagcagcgagggt
ggggccggagacgaagtagaggacgatcacaaggaggggagtcaagaagaccaccctgtc
ttcagcaccaaagaagaagaaggaggaggaggagagaggaaggaggggaccagcaagagt
tcagggtctgagagtcagagcgagtggacggtcagctacgctcagatcctggcctctctc
ctcacagaacagcagttggtcaacttctttgagaaaccgatggacctgtcagcaaaggta
gctgaggcaaaagtgaaacagtaccatgaaagggctggtctgcttatgctccagcaaggg
accagctga
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