KEGG   Coregonus clupeaformis (lake whitefish): 121536972
Entry
121536972         CDS       T08357                                 
Name
(RefSeq) caltractin
  KO
K10840  centrin-2
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    121536972
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121536972
   03036 Chromosome and associated proteins [BR:cclu03036]
    121536972
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121536972
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     121536972
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    121536972
   Centrosome duplication proteins
    Centriole replication proteins
     121536972
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      121536972
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 EF-hand_5 AIF-1 EF_EFCAB10_C EH EF-hand_SWAP70_N Dockerin_1 EF-hand_FSTL1 SurA_N_3 DUF7645 EF-hand_EFHB_C SUB1_ProdP9 SPEF2_C DUF5580_M SRI MJ1010-like_2nd LETM1_RBD CNNM
Other DBs
NCBI-GeneID: 121536972
NCBI-ProteinID: XP_041700605
LinkDB
Position
2:complement(32716927..32729271)
AA seq 171 aa
MASGYRKPNTTSNQRKKAGPKPDLTEEQKQEIREAFDLFDTDGSGTIDVKELKVAMRALG
FEPKKEEIKKMIADIDKEGSGTIDFNDFLCMMTQKMSEKDSKEEILKAFRLFDDDGTGKI
SFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEINEQEFLRIMKKTSLY
NT seq 516 nt   +upstreamnt  +downstreamnt
atggcttcaggctacagaaaacccaacaccacttccaaccagaggaaaaaggcaggtcct
aaaccagacttgacagaggaacaaaagcaggagatcagagaggcctttgacttgtttgat
acagatggctcgggcacaattgacgtgaaggaactcaaggttgccatgcgtgcccttggc
tttgaaccaaagaaagaagagatcaagaagatgattgcagacattgacaaggagggctct
gggaccattgattttaatgactttctctgtatgatgacacagaaaatgagtgaaaaagac
tcaaaagaagaaattctgaaggcgttccgcttatttgatgatgacggcacgggcaaaatc
tccttcaaaaatctcaagagagttgccaaggagctaggtgaaaacctgacagatgaggaa
ttgcaggaaatgattgacgaagcagaccgagatggagatggagagatcaatgagcaggag
tttctaaggataatgaagaagacaagtctatattga

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