Coregonus clupeaformis (lake whitefish): 121536972
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Entry
121536972 CDS
T08357
Name
(RefSeq) caltractin
KO
K10840
centrin-2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121536972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121536972
03036 Chromosome and associated proteins [BR:
cclu03036
]
121536972
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121536972
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
121536972
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121536972
Centrosome duplication proteins
Centriole replication proteins
121536972
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121536972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_9
EF-hand_5
AIF-1
EF_EFCAB10_C
EH
EF-hand_SWAP70_N
Dockerin_1
EF-hand_FSTL1
SurA_N_3
DUF7645
EF-hand_EFHB_C
SUB1_ProdP9
SPEF2_C
DUF5580_M
SRI
MJ1010-like_2nd
LETM1_RBD
CNNM
Motif
Other DBs
NCBI-GeneID:
121536972
NCBI-ProteinID:
XP_041700605
LinkDB
All DBs
Position
2:complement(32716927..32729271)
Genome browser
AA seq
171 aa
AA seq
DB search
MASGYRKPNTTSNQRKKAGPKPDLTEEQKQEIREAFDLFDTDGSGTIDVKELKVAMRALG
FEPKKEEIKKMIADIDKEGSGTIDFNDFLCMMTQKMSEKDSKEEILKAFRLFDDDGTGKI
SFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEINEQEFLRIMKKTSLY
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggctacagaaaacccaacaccacttccaaccagaggaaaaaggcaggtcct
aaaccagacttgacagaggaacaaaagcaggagatcagagaggcctttgacttgtttgat
acagatggctcgggcacaattgacgtgaaggaactcaaggttgccatgcgtgcccttggc
tttgaaccaaagaaagaagagatcaagaagatgattgcagacattgacaaggagggctct
gggaccattgattttaatgactttctctgtatgatgacacagaaaatgagtgaaaaagac
tcaaaagaagaaattctgaaggcgttccgcttatttgatgatgacggcacgggcaaaatc
tccttcaaaaatctcaagagagttgccaaggagctaggtgaaaacctgacagatgaggaa
ttgcaggaaatgattgacgaagcagaccgagatggagatggagagatcaatgagcaggag
tttctaaggataatgaagaagacaagtctatattga
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integrated database retrieval system