Coregonus clupeaformis (lake whitefish): 121536999
Help
Entry
121536999 CDS
T08357
Name
(RefSeq) zinc finger protein Helios-like isoform X1
KO
K09220
IKAROS family zinc finger protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121536999
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121536999
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121536999
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121536999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-C2H2_11
zf-C2H2_15
Zn_SUZ12
zf-C2H2_6
DUF4764
Motif
Other DBs
NCBI-GeneID:
121536999
NCBI-ProteinID:
XP_041700640
LinkDB
All DBs
Position
23:37184724..37213794
Genome browser
AA seq
529 aa
AA seq
DB search
METEATDGYSASNGDCSPRKTENSRLLVDLSANTPNAQQPKGPYSPTENTIKQEEEPEDE
GHRRTTAEDIGQSGEEESGLEEPMIDSPNNLQDGVPGSDGSCDPGTRLPNGDRPFQCNQC
GMSFTQKGNLLRHIKLHTGEKPFKCPFCSYACRRRDALAGHLRTHSVGKPHKCDYCGRSY
KQRTSLEEHKERCHNYLQSAGMDPTSNTGPYPGEVPKEQRPLVEAAAMATLNRPPVIEKL
QSNVGKRKSTTPQKFVGEKMMRYSYPELSYEMGLKYEKEAELMQAHMMDQAINNAISYLG
SDSPRPLVHHPHPHGPHRPQPSLSMAEVVPMVNPLFHHVYPLGPELRMDRPGSRNAPPHP
SPLPPPPPDFHPSSNGPIALTRPKQHHPQGTREEKESPSNSGLDSADSARSSPQDRLGYH
WNNPHHRPRSSPAYGGREEGRGVAEMAQGGAAERPMSREGVRVFGREGREMRVFQCEHCR
VLFLDHVMYTIHMGCHGYRDPLECNICGHRSKDRYEFSSHIIRGEHTFN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagaggcaactgatggatactctgcaagtaatggagactgctctcccaggaag
acagagaactctagattgttggtggacctgtctgcaaacacacccaacgcacagcagccc
aagggtccttattcacccactgaaaacaccatcaaacaagaagaagagccagaagatgaa
gggcacaggaggaccacagcagaggatataggacaaagcggggaagaggaatcgggattg
gaagagcccatgattgacagcccaaacaacctacaggatggggtccctgggtcagatggg
tcatgtgacccaggaactcggctgcccaatggtgataggccattccagtgtaaccagtgt
ggcatgtcgttcactcagaagggcaacctgttgagacacatcaagctgcacacgggggag
aagcccttcaaatgccccttctgcagctatgcctgccgccgtcgtgacgcacttgcaggc
cacctacgcacacactcagtgggtaaaccacacaagtgtgactactgtgggcggagctac
aaacagaggacgtcattggaggagcataaagagcgctgccataactaccttcagagtgct
ggcatggatcccacctccaacactgggccttatccaggtgaggtccctaaagagcagagg
cccctggtagaggccgctgccatggcaacattaaaccggccacctgtcattgagaaactg
cagagtaacgtagggaagaggaagagcaccactccacagaagtttgtgggtgagaagatg
atgcgctacagttacccggagctgagctatgagatgggtctgaaatatgagaaagaggca
gagctgatgcaggctcacatgatggaccaggctatcaacaacgccatctcttacctgggc
tctgactccccgaggcccctggtccaccacccccacccccatggtccccaccgtccacag
ccgtccctttctatggctgaggtggtacccatggtcaaccccctcttccaccacgtctac
cctcttgggccagagctgcgtatggaccgaccgggtagccgcaacgccccacctcatcct
tcacctctgccccctcctccccctgacttccatccctcctccaacgggccgatcgccctt
accagacccaagcagcaccacccccagggtaccagagaggaaaaagagtctcctagcaac
agtgggctagactcggccgactccgcccggagcagcccacaggataggctgggttaccac
tggaacaacccccaccaccgtcccagatccagcccagcatacggcggcagagaggagggg
cgaggcgtagctgagatggcccagggaggggcggcagagaggcctatgagtcgggaaggg
gtgcgtgtgtttgggcgagaggggcgggagatgagggtattccagtgtgaacactgccgc
gttctcttcctggaccatgtcatgtacaccatccacatgggttgtcatggttacagggac
ccgctggagtgcaacatctgtggccaccgcagtaaggaccgctatgagttctcatctcac
atcatccgcggggaacacaccttcaactag
DBGET
integrated database retrieval system
