Coregonus clupeaformis (lake whitefish): 121537050
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Entry
121537050 CDS
T08357
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121537050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121537050
03110 Chaperones and folding catalysts [BR:
cclu03110
]
121537050
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121537050
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121537050
Enzymes [BR:
cclu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
121537050
Messenger RNA biogenesis [BR:
cclu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
121537050
Chaperones and folding catalysts [BR:
cclu03110
]
Heat shock proteins
HSP60 / Chaperonin
121537050
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
121537050
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121537050
Exosomal proteins of other body fluids (saliva and urine)
121537050
Exosomal proteins of breast cancer cells
121537050
Exosomal proteins of colorectal cancer cells
121537050
Exosomal proteins of bladder cancer cells
121537050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
Motif
Other DBs
NCBI-GeneID:
121537050
NCBI-ProteinID:
XP_041700729
LinkDB
All DBs
Position
23:complement(28890398..28901383)
Genome browser
AA seq
576 aa
AA seq
DB search
MLRLPTVMRQMRPVSRALAPHLTRAYAKDVKFGADARAMMLKGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDSISKGANPVEIRRGVMLAVETVINELKRMSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLYDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISTVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKAQLHDMAVATGGTVFGDEAVGIALEDIQAHDFGKVGEVSVTKDDTMLLKG
KGDTAAIEKRQAEIVEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VNDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINTDQKIGIDIIRRALRVPAMTIA
KNAGVEGSLVVEKILQAAGEIGYDAMEGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTELPKDEKEGGMPGGMGGMGGMGGMGGGMF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtctacccacagtgatgagacagatgaggccagtcagcagggccctggccccc
cacctcacccgggcctacgccaaggacgtcaagtttggagccgatgctcgggccatgatg
ctgaagggagtggatctgctggctgatgctgtcgccgtcaccatgggacccaagggtcgc
acagtcatcatcgagcagagctggggcagccccaaggtgaccaaggacggcgtcactgta
gccaaagccatcgacctgaagtgcaagtaccagaacattggtgccaagctggtccaggac
gtggccaacaacacgaatgaagaagcaggagatggcaccaccaccgccaccgtgctggcc
agagctattgccaaggagggctttgacagcatcagtaaaggagctaaccctgtggagatc
cgccgtggtgtcatgctggctgtggagaccgtcatcaatgagctgaagaggatgtccaag
ccagtcaccacccctgaggagattgcccaggtggccaccatctctgctaatggagacgtg
gagatcggcaccatcatctccaacgccatgaagaaagtgggccgtaagggagtcatcact
gtcaaggatggcaaaaccctttatgatgagcttgagatcattgaggggctgaagttcgac
cgcggatacatctccccttacttcatcaacacagccaaaggccagaagtgtgagttccag
gatgcctatgtgttgctgagcgagaagaaaatctccactgtccagagcatcgtccctgcc
ctggaattggccaaccagcaccgcaaacctctggtcatcgtggctgaggatgtggatgga
gaggccctcagcaccctggtcctcaacaggctgaaggtgggactgcaggtggtggcagtc
aaggccccaggctttggagacaacaggaaggcccagctgcatgacatggccgtcgccacc
gggggcactgtgtttggtgatgaggcggtgggcattgccctggaggacatccaggcccat
gactttggcaaggttggcgaggtgtccgtcaccaaggacgacaccatgctgctgaagggg
aagggagacactgcggccatcgagaagcgccaggcagagatcgttgagcagctggagaac
accactagcgactacgagaaggagaagctcaacgagaggctggccaagctgtctgacgga
gtggctgtgctcaaggtaggaggaacgagtgatgtggaggtgaacgagaagaaggaccgt
gtgaacgacgccctgaatgccaccagggccgctgtggaggagggcatcgtgcccgggggt
ggctgtgccctgctgcgctccatccctgctctggatgcactcgtgcccattaacactgac
cagaagattggaattgacatcattagacgagccctgcgtgtgccagccatgaccattgcg
aagaacgcaggtgtggagggctctctagtggtagagaagatccttcaggccgcgggggag
attggatacgatgccatggagggagagtacgtcaacatggtagagaagggcatcatcgac
cccaccaaggtggtaaggactgcactaatggatgctgcaggtgttgcttctctgctctcc
accgccgagtgtgtggtcacagagctgcccaaggatgagaaggagggtggcatgccaggg
ggcatgggaggtatgggaggtatgggaggcatgggcggtggcatgttctaa
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