Coregonus clupeaformis (lake whitefish): 121537056
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Entry
121537056 CDS
T08357
Name
(RefSeq) ras-related protein Rab-5B isoform X1
KO
K07888
Ras-related protein Rab-5B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
cclu04144
Endocytosis
cclu04145
Phagosome
cclu04148
Efferocytosis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121537056
04145 Phagosome
121537056
04137 Mitophagy - animal
121537056
04148 Efferocytosis
121537056
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121537056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121537056
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121537056
04031 GTP-binding proteins [BR:
cclu04031
]
121537056
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
121537056
Endosome - Lysosome transport
121537056
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121537056
Exosomal proteins of other body fluids (saliva and urine)
121537056
Exosomal proteins of colorectal cancer cells
121537056
Exosomal proteins of melanoma cells
121537056
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
121537056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
121537056
NCBI-ProteinID:
XP_041700736
LinkDB
All DBs
Position
23:29277120..29280429
Genome browser
AA seq
225 aa
AA seq
DB search
MATRGSCRPNSTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLAEKRLVEYEEAQTYSEDTGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPEAHNTRSCCGGGGGGGGGGGGN
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggctaccagagggagttgccggcccaacagcacgctgccccagaccaagatatgccag
tttaaactggtcctactgggagacatggcagtgggcaagtccagcctagttctgcgcttt
gtcaagggacagtttgatgagttccaggagaccaccatcggagctgcgttcctggcccag
tctgtgtgtctagacgacactacggtgaagtttgagatctgggacacagcgggacaggag
cgctaccacagtctggctcccatgtactaccgcggcgcacaggctgccatcgtggtcttt
gacatcaccaagccggagacgtttgagcgcgctaaagcctgggtgaaggagctacagagg
caggctagccccaacattgtcatcgctctggcagggaacaaggcggacctggctgagaag
agactagtggagtatgaggaggcccagacctattctgaagacactggacttctcttcatg
gagacctctgccaagaccgccatgaatgtcaacgaacttttcctggccattgctaaaaag
atgcccaaaacagacacccagaatccgacacatgcagcgcgacaccggggagtgaaccta
caggatcctgaagcccacaacacccgatcctgctgtggtggaggaggaggaggaggagga
ggaggaggagggaactag
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