Coregonus clupeaformis (lake whitefish): 121537087
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Entry
121537087 CDS
T08357
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121537087
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121537087
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GFIT
Motif
Pfam:
LRR_8
Ig_3
LRR_4
I-set
Ig_2
fn3
ig
LRR_5
C2-set_3
V-set
LRR_14
C2-set_2
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
121537087
NCBI-ProteinID:
XP_041700789
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All DBs
Position
2:29566612..29586369
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AA seq
645 aa
AA seq
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MHRLLYAHVFLCCFSVAHSFCPSQCTCDYHGRSDGTGTRSVLCNDPDMSDIPVNVPVDTV
KLRVEKTAVRRIPTEAFYYLNDLRYLWITYNSISSVDAAAFYNLKVLHELRLDGNLISTF
PWKSLKEMPSLRTLDLHNNRLTDVAVEATPYLVNITYLDISSNKLTTLSSDFVDIWLPFN
GMPISSNLSQKVVLGLQDNPWVCDCRISKLIELSKMSDMSVVLMDQFLSCSGPENLAGVM
FQRAELDQCLKPSIMMSATKITASLGSNVLLRCDATGYPTPTLIWTTSDGSPVNNTVVQE
SPGEGVQWSIISLNGISYKDNGEYSCKAKNFAGNAEAAITLSVAGYDAATMPPERPNIEA
GGNNPSTTSSAPATGFPNSPSAPSTTTAPPTTTHPAVLPPVLTKKKPTPSSVQQIAPPKP
SKIQKDSDRKLAADQRKNKVASKSVQDLEIVEETPDSAVLLWTTNGLQSNAPLTIVYSTY
DEDDDSKRTVDTDAGSGKVLLEGLTSGMRYQVCLVAKGSAAGKDPCINFFTLDLVEDDAA
NKLLMIISGFACAVALPVIGLLVYKILLLHCKSRVPGSDDELSKDTYVKFETISMKQRTL
NANPTELWTYRQTKESQEKMLLCSRSSIDSQMTYKSDSSRSEFLC
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtcttctctacgcccatgtcttcctgtgctgcttcagtgtggcccattccttc
tgtccttcccagtgcacctgtgattaccacggacggagtgacggaacggggaccagatcg
gtgctgtgcaatgacccagacatgtccgacatccccgtcaacgtccccgtggatacggtc
aaactgcgggtagagaagacggcagtgcggcgcatccccaccgaggccttctactacctg
aacgacctgcgctacctgtggatcacctacaactctatctcctctgtggacgccgccgcc
ttctacaacctcaaggtcctccacgaactgcggctggacgggaacctgatttccaccttc
ccctggaagtccctgaaggagatgcccagtctgaggacgctggatcttcacaacaaccgc
ttgaccgatgtggccgtggaggctaccccatacctggtcaacatcacctatctggatatc
tccagcaacaagctgaccactctgtcttctgactttgtggatatctggctgcctttcaac
ggcatgcccatctcctccaacctgtcccagaaagtggtgctcggtcttcaggacaacccg
tgggtctgtgactgcaggatctccaagctgattgagctctccaaaatgtctgacatgtca
gtggtactaatggaccagttcctgtcctgcagcgggcctgagaacctggctggcgttatg
ttccaaagggcggagctggaccaatgtctcaagccatccatcatgatgtcagccaccaag
atcacagcctcgttgggcagcaacgtgctcctgcgctgtgatgccacgggttaccccacg
cctaccctcatctggactacttcagatggctcacctgtcaacaacacagttgtccaggag
tctccgggagagggtgtccaatggtccatcatcagcctgaatgggatctcgtacaaagac
aacggggagtacagctgcaaggctaagaacttcgctggcaatgcagaggctgccatcacc
ctgtctgtggcaggttatgacgctgcaaccatgcccccagagaggcccaacatagaagct
ggagggaataacccatccacaacgtcctctgctccggcaactggcttccccaactcccct
agtgccccgtctaccaccactgccccacccacgaccacgcatccagccgtcttgccaccc
gtcctcaccaagaagaaacccacgcccagcagcgtgcagcagatagccccacccaaacca
tccaagatccagaaagacagcgacaggaagctagcggcggatcagaggaaaaataaagtt
gcttccaagtctgtccaagatctcgagatcgtggaagaaacaccggatagcgcggttcta
ctctggacgaccaacggtttgcagagcaatgcacctctcaccattgtttactccacttat
gatgaggacgacgactccaaaaggacagtggataccgatgccgggagtggcaaagtccta
ctcgaaggcttgacttctggaatgaggtaccaggtttgtctggttgccaagggaagtgcc
gcggggaaagacccctgtatcaacttcttcaccctggaccttgttgaggacgatgctgca
aacaagctgctgatgatcatcagcggctttgcctgcgccgtggctttacctgtcatcggt
ttgctggtctacaagatcctcttactccactgcaagagcagagtgccaggttcggacgac
gagctatctaaagacacgtatgtgaagtttgagacgatatcgatgaagcagaggaccttg
aacgctaatcccactgaattgtggacctacaggcagaccaaagagtcccaagagaagatg
ctcctctgctccaggtccagcattgactcacaaatgacatacaagagtgacagttccaga
tcggaatttttgtgctag
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