Coregonus clupeaformis (lake whitefish): 121537110
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Entry
121537110 CDS
T08357
Name
(RefSeq) shaker-related potassium channel tsha2
KO
K04879
potassium voltage-gated channel Shaker-related subfamily A member 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121537110
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121537110
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121537110
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
121537110
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Motif
Pfam:
Ion_trans
BTB_2
Ion_trans_2
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121537110
NCBI-ProteinID:
XP_041700820
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Position
23:complement(58574191..58597765)
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AA seq
489 aa
AA seq
DB search
MTVVAGENHDETVALAALSQDVFDPADQRTDQECCGRVVINISGLLFETQLKTLAQFPAT
LLGDPRKRMRFFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPANVPLDIFMEEIKFYQ
LGEDVIENFKEDEGFIKEEERPLPENEFQRQVWLLFEYPESSGPARGIAIVSVLVILISI
VIFCLETLPEFRDEKEKNWDAELAMNGTTRAKKPNPFTDPFFIVETLCIIWFSFELLVRF
LACPSKPAFFKNMMNTIDIVAIIPYFITLGLELAEHQGNGQQAMSLAILRVIRLVRVFRI
FKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAETDDPDSGFSSIPDA
FWWAVVSMTTVGYGDMCPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEHE
EQFQYTHVTCGQQQQSSFGELKNSDSQPSLSKSDCVDMEDADSIKYTNCSPHKAHCSPHK
GYTGKLTDV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgactgtagtggccggagagaaccacgatgagaccgtggcactagcagccctgtcccaa
gatgtgttcgaccccgcggaccagcggacggaccaggagtgctgcgggcgcgtggtcatc
aacatctccgggctgctctttgaaacccaactgaaaacgctcgcgcagttccccgccact
ttactgggggacccgaggaagaggatgcgcttcttcgacccactgaggaacgagtacttc
ttcgacaggaaccgacccagcttcgacgccatcctctactactaccagtctggcgggcgc
ctcaggagaccagccaacgtccccttggacatattcatggaggagatcaaattttaccaa
ttaggagaagacgtgatcgagaattttaaggaggacgagggatttataaaagaagaggag
agaccgttgcccgaaaatgagttccaacggcaggtctggctgctatttgaatacccggag
agctcgggacccgcccgagggatagctatagtgtctgttctggtgattttgatttccatt
gtcatcttctgcttggagacgctgcctgagtttagggatgaaaaggagaagaactgggac
gctgagctggcgatgaatgggactacccgcgccaagaagcccaatccattcacggaccct
ttctttatagtggagaccctgtgtatcatctggttctcctttgagctgttagtgaggttc
ctagcctgcccctccaagcccgcctttttcaaaaacatgatgaacaccatcgacatcgtg
gccatcatcccctatttcatcaccctgggcttggagctggcggagcaccaagggaacgga
cagcaagccatgtctctggccatcctcagggtcatccggctggtcagggtgttcaggatc
ttcaagctgtccagacactccaagggtctccagatattgggacaaaccctcaaagccagt
atgagagagctggggctcctcatcttcttcctcttcatcggagtcatcctcttctccagc
gctgtctacttcgccgagaccgacgacccagactccggcttcagctcgatccccgacgcc
ttctggtgggctgtggtctccatgacaaccgtgggctacggggacatgtgcccggtgacc
atagggggcaagatcgtgggctctctgtgcgccatagccggtgtgctcaccatcgcgtta
ccggtccccgtcatcgtgtccaacttcaactacttctatcaccgggagactgagcacgag
gagcagttccaatacacccatgtgacgtgtggccagcagcagcaatcgtcgtttggtgaa
ttaaaaaacagtgacagccaaccgtcgctttccaaatcggactgcgtggacatggaggac
gctgactctatcaaatataccaactgcagcccccacaaagcgcactgcagcccgcacaaa
gggtacacggggaaactcactgatgtatga
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