Coregonus clupeaformis (lake whitefish): 121537112
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Entry
121537112 CDS
T08357
Name
(RefSeq) potassium voltage-gated channel subfamily A member 1
KO
K04874
potassium voltage-gated channel Shaker-related subfamily A member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121537112
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
121537112
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GFIT
Motif
Pfam:
Ion_trans
BTB_2
Ion_trans_2
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121537112
NCBI-ProteinID:
XP_041700823
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Position
23:complement(58493635..58498825)
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AA seq
494 aa
AA seq
DB search
MTVVAGDNMDETSTLPGHLQDTYPPDHDDHECCERVVINISGLRFETQLKTLSQFPETLL
GNPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDMFSEEIKFYELG
AEAMEKFREDEGFIREEEKPLPEKEFQRQVWLLFEYPESSGPARGIAIVSVMVILISIVI
FCLETLPELKEDPRGRMETVGNVTFYYKPNILTDPFFIVETLCIIWFSFELIVRFFACPS
KAAFFKNMMNTIDIVAIIPYFITLGTELAEDQEGKEKPSEQAASLAILRVIRLVRVFRIF
KLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEAEEKESFFTSIPDAF
WWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEE
QAQLLNVSNQDLNSDSNSSRRSSNSIASKSEYMEIDEGINNSIDNFRDANLRTANCTSVL
NQNCVNKGKLLTDV
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggtggccggtgataacatggatgagacgtccaccctgccggggcacctgcag
gatacctacccaccagaccacgatgaccatgagtgctgcgagagggttgtcatcaacatc
tcggggctgcgcttcgagacccagctaaaaacgctcagccagttccccgagacgttatta
ggtaaccccaaaaagaggatgcgctacttcgatccgctcagaaacgagtactttttcgac
cggaaccggccgagttttgacgctattctatattactaccagtccggtgggcggttgagg
aggcccgttaacgttcctctggatatgttctctgaggagatcaagttttacgagctcggg
gcagaggccatggagaagtttagggaggacgagggctttattagggaagaggagaaacct
ttaccagaaaaagagttccaacggcaggtctggctgctgtttgaatacccggagagctcg
ggacctgcccgagggattgctatagtatccgtgatggttatcttaatttcaatagtcata
ttctgtttggagacgctgccggaactcaaagaggaccccaggggtaggatggaaactgta
ggcaacgtgacattctattacaaaccaaatattctcacagaccctttctttattgtggag
accctgtgtatcatctggttctcctttgagttgatagtgcggttcttcgcctgccctagc
aaggccgccttctttaaaaacatgatgaacactatagacatagtagccatcatcccctac
ttcatcacgctgggcaccgagctggcagaggaccaggaggggaaggagaaaccaagcgag
caggctgcgtctctggccatcctcagggtcatccggctggtcagggtgttcaggatcttc
aagctgtccagacactccaagggtctccagatattgggacaaaccctcaaagccagtatg
agagagctgggcctcctcatcttcttcctcttcatcggagtcatcctcttctccagcgca
gtctacttcgccgaggcggaggagaaggaatccttcttcacgagcatccccgacgccttc
tggtgggctgtggtctccatgacaacagtgggctacggggacatgtacccggtgaccatc
gggggaaagatagtgggctcgctctgtgccatcgccggagtgctgaccatcgcgctgccg
gtgcctgtgatcgtgtccaacttcaactacttctatcaccgggagacggagggagaggag
caggcgcagcttctaaacgtcagcaaccaggaccttaattcggacagcaactcctcccgc
cgcagctccaactctatcgccagcaagtcagaatacatggagatagacgaagggatcaat
aacagcattgataactttagggacgcgaatcttagaactgctaactgtacttctgtcctc
aaccagaactgcgttaataagggaaagctgctgaccgacgtttag
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