Coregonus clupeaformis (lake whitefish): 121537158
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Entry
121537158 CDS
T08357
Name
(RefSeq) glycine receptor subunit alpha-4-like isoform X1
KO
K05271
glycine receptor alpha-4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121537158
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Glycine
121537158
BRITE hierarchy
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121537158
NCBI-ProteinID:
XP_041700831
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All DBs
Position
2:complement(37750808..37835447)
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AA seq
455 aa
AA seq
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MLAQLIRILYVLSFCFFQGGFIRLGSCKEEIKSSSRTVPSSQSPSDFLDKLMGKRSGYDA
RIRPNFKGPPVNVTCNIFINSFGSITETTMDYRLNVFLRQKWNDPRLAYQEYPDNSLDLD
PSMLDAIWKPDLFFANEKGANFHEVTTDNKLLRIFQDGSVLYSIRLTLILSCPMDLKNFP
MDIQTCTMQLESFGYTMNDLIFEWLVENPVQVADDLTLPQFVLKDEQDLGYCTKHYNTGK
FTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQ
SSGSRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKEFIRLRKKRRRQRI
EEELVRDSRGFYFRGYGLGHCLQTKDGTAVEGATIFAPPVSTVYDGEAVRKRFVDRAKRI
DTISRAVFPLSFLFFNIFYWITYKVLRHEDIHANL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcacagctcataaggattctgtatgtcttgtctttttgcttttttcaaggtggc
tttatcagactgggctcctgtaaggaggagataaagtcctccagtaggacagtcccctcc
tcgcagtcgccgtctgacttcctggacaagctcatggggaaaaggtctgggtatgacgcc
cgcatcagacccaacttcaaaggtccgcctgtgaatgtcacctgtaatattttcatcaac
agctttgggtccatcacggaaacgactatggactacaggctcaatgtgttcctacggcaa
aaatggaacgatccccgattggcttaccaggagtacccagataactccttggacctggat
ccctccatgttggacgccatctggaagcctgacctgttcttcgctaatgagaagggggct
aacttccacgaggtcaccaccgacaacaaactgctgcggatcttccaagatgggagtgta
ctgtatagtatcaggctgactctcatcctgtcctgccctatggacttgaagaatttcccc
atggatattcagacctgtaccatgcagcttgaaagctttgggtataccatgaatgatcta
atcttcgagtggttggtcgagaaccccgtgcaggtggctgatgatcttacgctcccacag
ttcgtgctgaaagatgagcaggatttgggctactgtaccaagcactacaacacaggtaaa
ttcacctgcatcgaggttaagttccacctggagagacagatgggctactacctgatccag
atgtacatccctagcctgctcatcgtcatcctgtcctgggtctccttctggatcaacatg
gatgctgccccggctagagtgggcctgggcatcaccaccgtgctcaccatgaccacccag
agctctgggtcccgggcctctctacccaaggtgtcctacgtgaaggccattgacatctgg
atggccgtgtgcctgctgttcgtgttcgccgcgctgctcgagtacgcggcagtcaacttt
gtctcgcggcaacacaaggagtttatcaggctgaggaagaagcggcggcggcaaagaata
gaagaagaactggtgagagacagccgtgggttttacttccgcggctacggactgggtcac
tgcctgcagaccaaagacggaacggctgtggagggggccacaatcttcgccccgccggtg
tccaccgtatacgatggcgaggcggtccgcaagcgctttgtggaccgggccaagcgcatc
gacacgatatcccgagcagtcttccctctgagcttcctcttcttcaacattttctactgg
attacctacaaagtgctgcgacacgaggacatccatgcaaatttgtaa
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