Coregonus clupeaformis (lake whitefish): 121537218
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Entry
121537218 CDS
T08357
Symbol
iqsec2b
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121537218 (iqsec2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121537218 (iqsec2b)
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121537218 (iqsec2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
RHG20_PH
PH_BUD3_C
Motif
Other DBs
NCBI-GeneID:
121537218
NCBI-ProteinID:
XP_041700841
LinkDB
All DBs
Position
24:complement(10173798..10244295)
Genome browser
AA seq
1524 aa
AA seq
DB search
METSPESPNRAVEYLLELNNIIESQAKLLETQRRRIEELEGQLDRVSQENQDLRLERPTP
PRASELPEQNHSNTNHRAEKPHSLPIHPGSSSGGCGSTTSPVAALPPSVVVPPAGPNRER
RTHTRLTRGMSCGSNPAEREQRERLEHTDSSDTNSSTIRRNVEAETQCVEPPGAHSDGPY
SQTTAYLRGTERYSDNNRGPGPPGPRGLPCVAPPSSASLAWALRTRHQPASLALRKQEEE
ENKRCKASLSDSYELSTDLQDKKVEMLERKYGGSFVSRRAARTIQTAFRQYRMNKNFERL
RNSASESRMTRRIILSNMRLQYSFDDRQAQQQGAGTQTNFTHSVGIGPPHSPDTERTGDY
THLEDSFSKQVKSLADSIDDALTCRGGRDDSQEGSREGGGISDDFGECVWSSSSNPSSRR
GLGERSRGGGGGLSMHGDSTATSYSDVTLYMDDCMPSSPLSLDRTPSSTDTEYWGPRGGV
GGREDSRDTEGGGSSNSRRSTPCTECRDYRLRGAHLPLLTIEPPSDSSVDTSDRSDRGSL
SRQIYEQEPAGGAGSPQGTLKHSPNTPRPVSTVAAQGQTRAPGRGPPLPTHIPHHVAHHH
HHHPHHHHQYPDTPTTPLSSSSSAALPPGGLEQPCLSDGDNDSLNSTTNSNETVNCSSGS
SSQDSLREPLPPLGKQTYQRESRHSWDSPPFNNDVVQRRQYRIGLNLFNKKPEKGIQYLI
ERGFVSDTPVGIARFILERKGLSRQMIGEFLGNRQKQFNKDVLDCVVDEMDFSGMDLDDA
LRKFQAQIRVQGEAQKVERLIEAFSQRYCVCNPTLVRQFQNPDTIFILAFAIILLNTDMY
SPNVKAERKMKIEDFIKNLRGVDNGQDIPRDLLVGIYQRIQKWELRTNDDHVSQVQAVER
VIVGKKPVMSLPHRRLVCCCQLYEVPDPNRPQRTGVHQREVFLFNDLLVVTKIFQKKKTS
VTYSFRQSFPLVEMQVHMFQNSYYLHGIRLTSAVLGGESKILIVFMAPSQQDRTRFVSDL
RESIAEVQEMEKYRVESELEKQKGVMRTGLLTGLVVGGVGVKGEVVNGTLGRPSLDDNYS
AGEGLKRSALSSSLRDLSDGGKRGRSNSVGSLDSTMESSSSTDLPLPQGSIISSPRPHQR
YPVPGVVPGCYPTEDYRPHRPILSPGTGVGGGPGQQHTAAGMGVGGVPSSVERAGVGSGP
GGGNTGSFLGSLFGSKRAKPPSPLIPPGPPYPAPVPPPTTGGPPPHSPSSLCQSEGGPSK
IQALHAQYCHTAAVQPPPPYYHHHRYHVQAGPTPLPGGGVPPHILQRGPLPCRPPIGPPH
AQLQQLAHLSQFSQHGMQGRYGNIAVGCPPPLSPHSQHSQNPQFALYHTQTTQSIRGGAV
PSKPPLTLSHSHPHPHAHSHTHPGHPLSAAPHPTPHPHQSHFIFGTLPHQHQHQQPPASV
NVHHAASAAQYQPLYPPLSSIPPPPPHSPLPPPSIPLTPLTPLCPHPPQHPGQPQQGPQV
TGAGATGTGGSSKSKPINRISTVV
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggagaccagtccggagagccccaaccgggccgtggagtacctcctggagctcaacaac
atcatcgagagccaggccaagctcctggagacccagcggcggcgcatcgaggagctggaa
ggccagctggaccgagtcagccaggagaaccaggacctgaggctggaaagacccactcct
ccacgagcctcggagctccccgaacagaaccatagcaacaccaaccacagagcagagaag
ccccactccctgcccatccaccctggcagcagtagtggaggttgtggcagcaccaccagc
cctgtcgccgccctgcccccctcagtggtagtgccccctgcagggccgaaccgggagaga
cgtacccacactaggctgacccggggcatgtcctgtggctcgaacccagcagagagggaa
caacgggagagactggaacacacagacagctccgataccaacagctccaccatccgcaga
aatgtggaagcagaaacccagtgtgtggagccgccaggggcccactcagacggcccctac
agccagaccacagcgtacctgcgtggcaccgagcgctacagtgacaacaataggggtcct
ggtcctccaggcccccgggggcttccgtgtgtggcccctcccagctcggctagccttgcc
tgggcactgcgaacacgtcatcagcctgccagtctggccctccgcaagcaggaggaggag
gagaacaagaggtgcaaggccagtctctctgacagctatgagctctctactgacctacag
gacaagaaggtggagatgttggagaggaagtacggtggctccttcgtgagccgcagagca
gcccggaccatccagacagccttccgccagtatcgtatgaacaagaactttgagcgcctc
cgcaactcggcttccgagagccgcatgacgcgacgcatcatcctgtccaacatgcggctg
cagtactcgtttgacgaccgccaggcgcagcagcagggggccggaacacagacaaacttc
acacacagtgtgggcattggccctcctcattcacctgacacagagcggacaggagactac
acacacctggaagactccttctccaaacaggtgaagtccctggctgactccatagatgac
gccctgacctgccgtggcgggcgggatgactcccaagagggcagcagggagggtggaggc
atcagtgatgactttggggagtgtgtgtggagcagcagcagtaacccctcatcccggaga
ggcctgggtgagagatcccggggagggggaggaggcctcagcatgcacggagacagcaca
gccacctcctacagtgatgtcactctatacatggatgactgtatgccctcctcgcccctg
tctctggaccggacccccagcagcacagacacagagtactggggccccaggggaggcgtg
gggggccgtgaggacagcagggatactgagggagggggtagtagtaatagccgtcgcagc
accccctgcacggagtgtcgagactaccgtctaaggggcgcccacctgcccctgctcaca
atcgagccccccagcgacagctccgtggacactagcgaccgttcggaccgtgggtccctc
agcagacagatctacgagcaggagccagcgggaggagcaggctctcctcagggaacactc
aaacactcccctaacactccccgccctgtctccacagtcgcagcgcagggccagacccgg
gcccctggccggggcccccccctgcccactcacatcccccaccacgtggcacaccaccat
caccaccaccctcaccaccaccaccagtacccagacacccccaccacccccctgtcctcc
tcctcctctgctgcgctgccccctggtggccttgagcagccctgtctgtctgacggggac
aacgactctctcaactccaccaccaactccaacgagacagttaactgcagctctggctcc
tcatctcaggacagcctgagggagcccctaccccctctgggcaagcagacctaccagaga
gagagtagacacagctgggactcaccgccattcaacaacgatgtggtgcaaagacgccag
taccgcatcggactcaacctattcaacaagaagccagagaaagggatccagtacctgatt
gagcgaggatttgtgtccgacactccggttgggatcgctcgcttcattctagagagaaag
ggcctgagcagacagatgattggagaattcctcggcaaccggcaaaaacagttcaacaag
gacgtactggattgtgtggtggacgagatggacttctcggggatggaccttgacgatgct
ctgaggaagttccaggcccagatcagagttcaaggagaagcccagaaagtagagaggctc
atagaggctttcagtcagcggtactgtgtgtgtaacccaacgctggtccgccagttccag
aacccagacacaatcttcatcctggccttcgccatcatcctcctcaacacggatatgtac
agccccaacgttaaggcagagaggaaaatgaagatagaggacttcatcaagaacctcaga
ggagtggacaacggccaggacattcccagggacctgttggttgggatctaccagcgcatc
cagaagtgggagctaaggaccaatgacgaccacgtgtcccaagtgcaggcagtggagaga
gtcatagtaggcaaaaagcctgtgatgtctctgccacatcgcaggctggtatgctgctgt
cagctctatgaggtgcctgaccccaaccgaccccagaggacaggagttcaccaacgggag
gtcttcctgttcaatgacctgctggtggtgactaagattttccagaagaagaagacttct
gtgacgtacagtttcagacagtccttccctctagtggagatgcaagtccacatgttccag
aactcctactacctccacggtatccgcctgacctcagcggtgctgggtggggagagtaag
atccttatcgtgttcatggcacccagtcagcaggaccgcacccgctttgtcagtgacctg
agagagagtatagctgaggtgcaggagatggagaagtacagagtagagtctgagttggag
aagcagaaaggcgtgatgcggactggcctgctgaccggcttggttgtaggcggagtgggg
gtgaagggtgaggtggtgaacggcaccctgggaaggcccagtctagatgacaactactct
gcaggagagggactgaaacgctccgcgctcagctcatctctccgagacctatcagacgga
gggaaacgtggtcgcagtaacagtgttggctccctcgacagtaccatggaaagctcctcc
tcaactgaccttcctcttcctcagggttccatcattagcagcccccggccccaccagcgt
tacccggttccgggcgtggtcccaggctgctaccctacagaagactaccggccgcatcgc
cccatcctgagccccggaacgggggtggggggtgggccggggcaacaacacaccgctgct
gggatgggagttgggggggtccccagcagtgtagagagagcaggggtggggagcggccct
ggggggggcaatacgggctccttcctgggctctctattcggcagcaaacgcgccaaaccg
ccaagtccccttataccaccggggccaccctaccccgcccctgtcccaccacccactacg
ggagggccccctcctcactccccttcatctctgtgccagtcggaggggggcccttccaag
atccaggccctgcatgcgcagtactgccacacggccgctgtgcagccccctcccccctac
taccatcaccatcgctaccacgtccaagctggccctactcccttgccaggcgggggcgtg
ccccctcatatccttcagagagggccgctcccctgtcgccctcctattggcccccctcac
gcccagctccagcagctggcccatctctcccagttttcccagcatggcatgcagggtcgc
tacggcaacatagcggtgggctgtcctccccccctttctcctcactcccaacattcccag
aacccccagttcgccctgtaccacacgcagaccacacaatctatcagggggggcgctgtg
ccaagcaaacctcctctgactttgtctcactcccacccgcacccccacgcacactcccac
acccaccccgggcatcccctcagtgccgcgccacaccccaccccccacccacatcagtct
cacttcatttttggcacgctgccccaccaacatcagcaccagcagccgcccgcctccgtc
aacgtccatcacgccgcgtccgccgcccagtatcagcccctgtaccctcctctctcttcc
atcccccctccccccccccactcccctttaccccccccttctatcccccttacccctctt
acccctctctgccctcaccccccccagcaccccgggcagcctcagcaggggccccaggtg
acgggggctggggcgactggcacagggggcagctccaaatccaaacctatcaaccggatc
agcacggtggtgtga
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