Coregonus clupeaformis (lake whitefish): 121537227
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Entry
121537227 CDS
T08357
Name
(RefSeq) neural cell adhesion molecule L1.1-like isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121537227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121537227
04090 CD molecules [BR:
cclu04090
]
121537227
04091 Lectins [BR:
cclu04091
]
121537227
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
L1 family
121537227
CD molecules [BR:
cclu04090
]
Proteins
121537227
Lectins [BR:
cclu04091
]
I-type lectins (Siglecs)
121537227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Tissue_fac
Ig_4
C2-set_3
C2-set_2
OmcA-like_N
Motif
Other DBs
NCBI-GeneID:
121537227
NCBI-ProteinID:
XP_045071263
LinkDB
All DBs
Position
Unknown
AA seq
1284 aa
AA seq
DB search
MCASHYERASSPPALLLLPLFLLSSSPPLAHAAIQIPKDYKVQNILQPPILTKMPESYTA
FSLDDIILPCEATGTPKPSFRWVKDGQKLNWMEHKGSGNFTANGDKPLSDYQGHYRCYAD
NTLGTAMTHTVKLITEPTPTLPKQKSFRKTAEEGDSVVLHCNPPKSSTIPHIHWMDKKLL
HIGQSERVTTGLDGNLYFANVLKNDSRDDYTCHAQYIAARTILPKEHISLTVTPSNDVAR
GRKPHLMQPQGSHSSYLALRGHSLVLECIPKGLPTPSVMWKRMDGNLLETGARIENHGRW
LQFDSITQEADGEYECLASNTHGSVTHTYTVTVEAEPYWVKEPLSLLYSPGETVRIDCQA
EGIPTPTITWSMNGEPVTEVDIDPRRRVSGGVLILTDLVFSDTAVYQCEATNKHGNILNN
TYIYVIELPAQILSSDGVVYKATEGGVARLHCEAFGSPRPQVTWESEDLQDLLLSDSRVS
QLTNGTLELFNSSREDSGVYTCSITHSNISITAHLEVLNRTVMLIGPQAVRVRRGRNSWL
DCHFTFDPQLNRPQILWRKDGHKIIESPPGDKYTVFENGTLRVTDVQSADGGLYSCEVIT
DLDSVMASGSITVVARPSPPVSLSLSEQQDRSLTLSWTPGHTHNSPTTEFVVEMREEQHS
EGEGKWEEAKSVTGDVNNLELSLLPYSTYRFRVSGVNDQGRSNPSEPSETYSTPPAVPDV
NPGKVRSESTVPGTLVIMWEELDQRLHNGPRFQYKVSWRQAQGREPHWSHTHVPGPPYLV
NGTGAFSSYQMKVQAVNSLGEGPHPVPSIGHSGEDYPLASPSNISVSVANSSSSVRWQPV
DTHTVQGHLLGYKIYLKRLGSQGGAMEHREESEMEGGVERGMEREEEGLVVVVQGSKTEE
TVTGLKLYSLYELSITTFNSKGEGPHSPTHRFSTPEGVPGPPASLGFESPSETELTLHWR
PPIQPNGRLVGYVLQYQQISDSGDSPLQLEVIYDPTVTHFLLEGLDPHSRYVFYLRGRTT
AGQGPPITRECATLLDGVPPSNISIVVGETSVNLSWVPGDRYRNHSFHIKYLSKTVGGKW
EESEQVNTMQAFYSLTGLQPGTQYRLLITHGNYTHWEEEIQTTGPEPHGVEGDFATQGWF
IGMISAVVLLMLLLLVLCFIKRSKGGKYAVKDKEENQMDSEARPMKDETFGEYRSLESDG
DEKRSVSQPSLCVESKLGSDDSLAEYGDSVDIQFNEDGSFIGQYSGRGPAPTGNESSGPA
SPVNQDPPPPPIGPSFSGILDRPS
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcatctcattatgaaagggccagtagcccccctgctctcctcctcctccctctg
ttcctcctctcctcctctcctccactcgctcatgcagccatccagattcccaaagactac
aaagtacagaacattttacagcctcccattctgacaaagatgcctgagtcctatactgcc
ttttcattggacgatatcatactgccctgcgaggccaccggcacccccaaacccagtttc
cgctgggtaaaggatggtcagaagttgaactggatggaacacaagggttctgggaatttc
acagccaatggcgacaagccgctcagcgattatcaaggacactaccgttgctacgccgac
aacaccctgggaacagccatgacacacaccgtcaaactcatcactgaaccgacgccgacc
ctccctaagcagaagagttttcgtaaaacagcagaggaaggagacagtgttgttctccat
tgcaaccctcccaagagctccacaatccctcacatacactggatggataagaaactgctc
catataggtcagagtgagcgtgtgacaacaggtctggatgggaacttgtactttgccaat
gtgttgaagaacgacagtcgagatgactacacgtgtcatgctcaatacatcgctgccagg
accatcctgcctaaagaacacatctcgctcactgtcacacctagtaatgacgtggctcgt
ggcaggaagccccacctgatgcaacctcagggctcccacagctcttacctggccctcagg
ggccacagcctggtactggagtgtatacctaaaggacttcctactccttcggtgatgtgg
aagcgtatggatggtaatctgttggagacaggagccaggatagagaaccacggcaggtgg
cttcagttcgacagtataacccaggaggcagacggagagtatgagtgtctggcttcaaac
acacacggatccgtcacacacacctacactgtcactgtggaagctgagccatactgggtg
aaggagcccctgtcgctgttgtattcccctggggagacagtgaggatagactgccaggcc
gagggcatccccacccctactatcacatggagtatgaacggagagcctgtcacagaggta
gacattgaccctaggcgaagggtgagtggaggggtgttgatcctaacagatcttgtgttc
agtgatacggctgtgtaccagtgtgaagccaccaacaaacacggaaacatcctcaacaat
acatacatctatgtcatcgagctgccagctcagatcctgtcgtctgatggggtggtgtat
aaggctacagaggggggcgtggccagactgcactgtgaggccttcgggtcaccccgtcca
caggtcacatgggagagtgaggatctccaggacttgttgctgtcggacagtcgtgtgtct
cagctgaccaatgggacgctagagctgtttaacagtagcagagaggacagtggagtctac
acctgctccattacacacagcaatatctccatcactgctcacctggaggtcctcaaccgt
acagtgatgctgatcggtccccaggctgtgcgggttaggaggggaagaaactcctggttg
gactgtcatttcacctttgacccccagctgaaccgtccccagatcctctggaggaaagac
ggacacaagatcatagagtcaccacctggcgacaagtacactgtgtttgagaatggaacc
ctcagagtgacagacgtccaatcagcagacggagggctgtactcctgtgaggtcatcaca
gatctggacagtgtaatggccagcggttccatcactgtagtggcccgtcccagccctcca
gtgtctctgtctctgtctgaacagcaggaccgcagcctgactctcagctggacacctgga
cacacacacaactcccccaccacagagtttgtggtggagatgagggaggagcaacattct
gagggggaggggaagtgggaggaggcaaagagtgtgactggagatgtcaataatctggag
ttgtccctcctcccgtactccacctaccgtttccgggtcagcggggtcaacgaccagggg
aggagcaacccctcagaaccatctgagacttacagcaccccaccagcagttcctgacgtt
aatcctggtaaagtgcgtagtgagtctacagtaccaggaacactggtcatcatgtgggag
gagttggaccagcgtttgcacaacgggccaaggttccagtataaggtgtcatggcgacag
gcccaggggcgggagccacactggagccacacccatgtgccaggtcctccctacctggtt
aacggaaccggagcattctctagttaccaaatgaaggtccaggctgtcaactctctggga
gaggggccgcatcctgtacccagcataggacactctggagaggactacccgctggcctct
ccatctaacatcagtgtgtcagtagctaacagctcatccagcgtcaggtggcagccggtt
gacacacacacggtccagggtcacctgcttggttacaagatctatctgaagaggttgggt
tcccagggaggagcgatggagcacagagaggagagcgagatggagggaggagtggagcga
gggatggagagagaggaggaggggttggttgtggtggtgcagggcagcaagacagaagag
acggtgacagggctcaaactctattcgctgtacgagctgtcaatcacaaccttcaacagc
aagggggaggggcctcactcaccgacacaccgcttcagcacgccggagggagttcctggt
cctcctgcgtctctgggttttgagagtccgtcggagacagagttaacccttcactggagg
ccccccattcagcccaacggacgacttgtgggatacgttctacagtaccaacagatttca
gacagcggagacagtcctctacagttagaggtgatctatgatcccacggtgacccacttc
ctgttggaaggtctggaccctcatagccgctacgtcttctacctgaggggacgcactact
gccggacagggacccccaatcacacgggagtgtgccaccctgctggacggagtccctccc
agtaacatcagtatagtggtaggagaaacgtctgtcaacctgagctgggtccctggagac
agatacaggaaccacagcttccacatcaaatacctcagcaagactgttgggggtaagtgg
gaggagtcagaacaggttaacacgatgcaggcattctattcgctgacgggtcttcagcct
ggaacacagtaccgcctcctcatcacccatggcaactacacacactgggaggaggagata
cagaccaccggtccagagccacatggtgtggaaggtgattttgctactcagggctggttc
atagggatgatcagtgctgtggtgttgctgatgttgctgcttctggttctctgtttcatc
aagaggagtaaggggggcaagtatgcagtcaaagacaaggaagagaatcagatggactct
gaggctcggccaatgaaagatgagactttcggagagtacagatctctggaaagtgatggt
gatgagaagcggtcagtcagtcagccgtcactgtgtgtggagagtaaactggggagtgac
gactccctcgccgaatacggagacagcgtcgacatccagttcaatgaggacggctctttc
attggtcaatacagcggccgagggcccgcccctacaggaaatgagagctctggccccgcc
tcccctgtcaatcaagaccccccgcctcctccaataggcccctccttctccggaatactg
gacaggcccagttag
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integrated database retrieval system
