Coregonus clupeaformis (lake whitefish): 121537232
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Entry
121537232 CDS
T08357
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2-like
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121537232
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121537232
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121537232
Ion channels [BR:
cclu04040
]
Other channels
Mechanosensitive channel (Piezo)
121537232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
121537232
NCBI-ProteinID:
XP_045062854
LinkDB
All DBs
Position
24:40443269..40480388
Genome browser
AA seq
2658 aa
AA seq
DB search
MAGDIVVGMLYNLVLPLLLLAGKTGTFLLLICSTSVTFLALQCFMQITFAYVPQYENEYW
ENVLYHLGIVRFSLVDAGDILRLLAPDLGLFLSGLFILCLVRKLLRPAPQLNVHENCIKP
SDPENVEMSDSESEDGSDVTDGSSYDSSDEITAAPATPPQFVQKFIAFALGLRLLLSAIM
NTAGKVVVTILLGLAGIAMPSLTSAVYFGTFLGLVWWWVLLRSLSLLFFSTLCVMMAIFS
AGHLLSLYLYQLPLAQQIVPPQDIYARLFGMTAFIWTNETEPYSLGLQADVSWPVFTNPI
VLLLLYYTMVALLHKWVYITEEELLTSTDDEIYMPDEEMQERRSEVSMRERKSEVSMNEE
RSEVSMNEGRSEVSMREGRSEVSMNEERSEVSMNEERSEVSMNEERSEVSMNEGRSEVSM
NEERSEVSMSEEDNVPTPPGPSGLALFGLFIMKHSYVSALIIMMVWSITYNSWLTFALLV
WSCVIWMMRDRRRYAMMSAPFLAVYGTLLLLLAFLSGLRLRQDELYPGLPHAVLVDFDMA
TYPAPCIHLGGKVFYAFSFWLLFRQQLKEKQEEQDLKESDESLDEVKVLPPDEGETSPIM
EMLGSAVKGTLVKYWILFCCYMFFVVSFSGKVMVYKILYIVLFLFCVALYQIRCDVWRRV
LKYFWAVVVGYSMMVLIAIYMYQFKTVSGLFRQIMGMSEEGLRDLGLEQYDTVELFARIL
LPAAFLLACILQLHYFNQDFLDLTNLDNVPVHHGQTREEELRNSVNVIADMMAKEQSEQM
SGESERVESQDTLDSDGLSASSEKPEEEQKGTGPPEEYLTQWGLIVDRASLLLFQTLVAF
QRAQEMGWRLLEVHSLKIVSTGIIWVSLQEVSLMNFLFLVLWTFALPFPRLRPIASSVSS
VWACVMVVCKMLYQLKVIKPLEYSSNCTASLVSANGTGLELEGNMAELLRRSVLYVKPVD
PATWCGALRKCEDRILPCLRNHLMVLGLLVFEVTVHRHQLYYRLRNNLKVPTFSIIFQGI
TRQHLDHGILPCIKYFINYFFYKFGLEVCFVVAVNVIGQRMDFYALLHSCALMAVLSRRR
RKAMGEVWPKYCCFTASLIVLQYLLCIGIPPALCVDYPWRTSSQALTSNLIKWLYLPDFA
MRPAPFFILYDHLLLLCSTLQWQVFEEENRAAVRLMAGENVEISRSLDPRSFNQYIPVNN
FLHCRSYLDIAKVFVFSYFFWLVLCLIFITGTTRINIFCLGYLVACFYFMLFGGSLLMQP
VRNILRLWDCLIGYTCFVIGMKNLLSLGSCAYLDSLLKNGCWLIQAFSMVCTIEGYDVSA
PDDECELPEGEAGIVWDAICFTVLLAQRRVFLSYYFLYVVSDLRASKILASRGAELFEAK
VKKLVAARLEMERKSVETLKKQMEKIKSKHKSKPGQGDAAAPPIDIVPKVENNCGYHLFE
SDSEEEEEEVQENKQEEAPPKKKSAFQLAYEAWVTSSKAALNLHKKEENKMKKEEKRRAK
RELQRQQGIERAESHQDELEVEERDEEEEKENTFQRIIDTLKFLWVFILSLLDDVTEGLN
SFCKDNQDISKVLRFERALLGQQQKKGKEVSQESVKRFYENWMSRQNTLASLEDQDDIVL
PVSSPPPVPSSPRGYSKLKHAHSKISWGSSLSSCMTDETLLGSREPTLDELDVPPVLQPA
AEQLRRKLLKTANLDLGSFDSEDPPPSSHDDTVPDKEDNEGEDACKKEGEYTVEVEYRME
KKEWREEEEEEREKAVMFSGFISLDYLECDEKSEDFPDSPRPLSETRHLTASELLLNNMF
DNDEIEESDKFFQSLPRHLRLVFALYNTMVSKSEMLCYFVIILNHMVSASLLSLILPILI
FLWAMLSVPRPTKRFWMTAIIYTELIVVVKYFFQFGFFPWTTSAYRGINAERPFALPNII
GVEKKYGYVLFDLIQILALFFHRSILKCHGLWDNKEVEMPDFFKKLKKKTEKMKMSGGEK
AGDQLKRRLPCLPLQASTASLFCRCGNANSTERDSDMQLKKRHSKKKRHHNKVPLTRKER
IKKLIRERMLEAKAAIIEVALHIYLPIRQFFYDIIHPEYSPVCDVYALMFLIDVVNFIVI
IFGYWAFGKHSAAADITDALGEDQVPSAFLVMLLIQFGTMIVDRALYLRKTLMGKCVFQV
VLVFGIHFWMFFILPGVTERRFNMNQVAQLWYFVKCIYFGLSAYQIKCGYPNSVLGNFLT
KNYNYLNLFLFQGFRLVPFLIELRAVMDWVWTDTTLSLGSWICVEDIYANIFILKCWRES
EKRYPHTPGQKKKMVVKYGMGGFIIFFLISVIWFPLLFMSLVKSVAGVTNQPLDVSIQLS
IAGYEPLFTMSAQEQNLVPYSVAGLNRLTNLYATHPSAMQFLGNYMAEDIVIAKIKSDAS
LLWSISPASRDAMIHELSNSTHIYITLRWVLLRNVSLSMNVETIGEHTVKYEDRALRDQI
VQMLKGTRSDSVIIESLLPKFIRGPGGPESKMATRLKVEHSDRPEDLQTFAFFWPLSIKL
QRAEDNGSAEGGQWWIVEECTPGQGLIQSSCHSIEIVVFNDKVSPASLDALAGQGIVGLY
MSVVLVVGKFVREFFNGISRSIMFEELPCVDRVLKLCTDIFVVRETGEMELEETLFEKLI
FLYRSPETMIKMTREKSD
NT seq
7977 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggatattgtggtggggatgctctataacttagttctacctcttcttctgctt
gcaggaaaaacagggacgttcctgctgctcatctgttctaccagcgtgacgtttctggct
ctccagtgtttcatgcagatcacttttgcctacgtacctcagtatgagaacgaatattgg
gaaaatgttctctaccatctgggcattgtacggttcagtttggtggatgcaggggacatt
ttgcgtctcttagcccctgatctgggtctcttcctgtctgggctcttcatactctgcctg
gtcaggaagctgctacgccccgcgccccaacttaatgtccacgagaactgtatcaaaccc
tctgaccctgagaatgtggagatgtccgactcagagtctgaagatgggagtgatgtcaca
gatggctcatcctatgacagctcagatgaaatcacagcggcgccagcaacccctcctcag
tttgtccagaagttcattgcatttgcccttggactgcgcctcttgctgtctgccatcatg
aacacagcagggaaagtagtggtcaccatactactggggctagcaggcattgccatgccc
tccctgacctcggcggtgtatttcgggacgttcctgggcctggtgtggtggtgggtgtta
ctccgctccctcagtttgctgttcttcagtaccctctgtgtgatgatggctatattcagc
gccggtcacctgctgagcctctacctgtaccagctgcccctggcccaacagatcgtacct
ccacaggacatctacgccaggctgtttggtatgacagcgttcatctggaccaatgagacg
gagccatacagtctgggtctgcaggcagatgtcagctggcctgtcttcaccaaccccatt
gtgctgctgctcctctattacacaatggtggctctgctgcacaagtgggtctacatcact
gaagaagagctactgaccagtacggatgatgaaatttatatgccagatgaggagatgcag
gagaggaggagtgaggtgtctatgagggagaggaagagtgaggtgtctatgaacgaggag
aggagtgaggtgtctatgaacgaggggaggagtgaggtgtctatgagggaggggaggagt
gaggtgtctatgaacgaggagaggagtgaggtgtctatgaacgaggagaggagtgaggtg
tctatgaacgaggagaggagtgaggtgtctatgaacgaggggaggagtgaggtgtctatg
aacgaggagaggagtgaggtgtctatgagcgaggaagataatgtgcccacccctcctggc
cccagtggactggctttgtttggcctgttcatcatgaagcacagctatgtcagcgcactc
atcatcatgatggtgtggagcatcacctataacagctggctgacgttcgccctgctggtg
tggtcgtgtgtgatctggatgatgcgtgaccgtcggcgctacgccatgatgagcgctccc
ttcctggcggtgtacggcaccttgctgttgctgctcgccttcctaagcggcctgaggctg
cggcaggacgagctgtaccctggcctgccacatgccgtgctggtggactttgacatggcc
acgtacccagcaccctgcatccacctgggaggcaaggtgttctacgccttcagcttctgg
ctactgttccgccaacaactgaaggagaaacaggaagagcaggatctcaaggagtctgac
gagtctctggatgaagtgaaagtactcccaccggatgaaggtgaaacctcccccataatg
gagatgctgggttcagcggtcaaaggaaccctggtgaagtactggatcctgttctgctgc
tacatgttctttgtggtcagcttctctgggaaggtgatggtctacaagatcctctacatc
gtgctgttcctcttctgtgttgccctctaccagatccgttgtgacgtgtggaggcgagta
ctgaagtacttctgggcggtggtggtaggctactccatgatggtcctgattgccatctac
atgtaccagttcaagaccgtctctggcctcttcaggcagatcatgggcatgtctgaggaa
ggtctgcgtgatctcgggttggagcagtatgatactgtggagctgtttgctcggatcctc
ctccctgcagccttcctattggcctgcatcctgcagcttcactacttcaaccaggacttc
ctggatctcaccaacctggacaacgtacctgtccaccacggacaaaccagagaggaagag
ctgaggaactcagtcaatgtgatagctgacatgatggcgaaggagcagagtgagcagatg
agtggggagtcagaacgtgtggagagtcaggacaccttggacagtgatggactgtctgcc
tcatcagagaaaccagaggaggagcagaagggaacaggtcccccagaggagtatctgacc
caatgggggttgatagtggaccgggccagcctgctgctgttccagactctggttgccttc
cagcgggctcaggagatgggctggaggctgctggaggttcacagcctcaagattgtttcc
accggcatcatctgggtgtccctacaagaggtgtccctgatgaacttcctgttcctggtt
ctgtggaccttcgccctgcccttcccccggctccgtcccatcgcctccagtgtgtcctca
gtctgggcctgtgtcatggtggtgtgtaagatgctgtaccagctcaaggtcatcaaacct
ctggagtactcctccaactgcactgctagcctggtgtcagctaacgggacagggctggag
ctggaggggaacatggcagagctgctgaggaggtctgtgctgtatgtgaagcctgttgac
ccagccacatggtgtggagcgctgcgcaagtgtgaagacaggatcctgccctgtctcagg
aaccacctgatggtgctggggctgctggtgtttgaggtgacggtccatagacaccagctc
tactatcgcctccgcaacaacctcaaggtccccaccttcagcatcatcttccagggcatc
acacgccagcacctggaccacggcatcctgccctgcatcaaatacttcatcaactacttc
ttctacaagtttggcctggaggtgtgctttgtggtggcggtgaatgtgattggccagcgg
atggatttctacgcgcttctgcactcctgtgctctgatggccgttctgtcacgacgacgc
aggaaagccatgggggaggtgtggcctaagtactgctgcttcactgcaagcctcatagtg
ctgcagtacctactctgtatcggcatccctcccgctctctgtgttgattatccatggagg
acctccagtcaggctttgacctccaacctcatcaagtggctttacttgccggactttgcc
atgcgtcccgcccctttcttcatcctctatgaccacctcctgctgctgtgctccacgctg
cagtggcaggtgtttgaggaggagaaccgtgccgccgtgcgcctcatggcaggggagaac
gtggagatcagccgcagcctggacccgcgctccttcaaccaatacattcccgtcaacaac
ttcctccactgcaggtcctacctggacatcgccaaggtttttgtgttcagctacttcttc
tggctagtgttgtgcctcatcttcatcacgggcaccacccgcatcaacatcttctgcctg
ggctaccttgtagcctgcttctacttcatgctgttcgggggcagcctgctcatgcagccc
gtacgaaacatcctcaggctctgggactgcctcatcggatacacttgcttcgtcatcggc
atgaagaacctgctatctcttggctcatgtgcttatctggacagcctgttgaagaatggc
tgctggctcattcaggccttcagcatggtctgtacaatcgaaggctatgatgtctctgct
cctgatgatgagtgtgagctgccggagggggaggcgggcattgtgtgggatgcgatctgc
ttcaccgtgctcctggctcagagaagggttttcctcagctactacttcctgtatgtggtg
tctgacctcagggcctccaagatcctggcctccaggggtgctgagctctttgaagccaaa
gtgaagaaactggttgctgccagactggagatggagaggaagtctgtggagacgctgaag
aagcagatggagaagatcaaatccaaacataagagtaagcctggccagggagacgcagca
gcgccccctattgatatagtgccaaaagttgagaacaactgtggctaccatctttttgag
agtgacagtgaagaggaagaggaggaagtccaggaaaataaacaggaagaggctccacca
aagaagaaatctgcttttcagttagcctatgaggcatgggtcacaagctccaaagcagcc
ctgaatctgcacaaaaaagaagagaacaagatgaaaaaagaggagaagaggagggcaaag
agagagctgcagagacagcaaggcattgagagggccgagtctcatcaggacgagttggag
gtggaagagagagatgaagaggaggagaaagaaaacacatttcagaggatcatcgacaca
ctcaaatttttatgggtgtttatcctgtcccttttggatgacgtcactgagggccttaac
tcgttctgcaaagataaccaggacatctccaaagtgctgcgctttgagagggctcttcta
ggccagcaacagaaaaaggggaaagaggtgtcacaggagagtgtgaagcgcttctatgag
aactggatgtctaggcagaacactctggcctcactggaagaccaagatgacatagttctc
cccgtctcctccccaccacctgtaccctcatcaccgcgaggttactcaaagctcaaacac
gcccactccaaaatctcctggggcagcagcttgtccagctgcatgacggatgagaccctg
cttgggtctcgagagcccactctggatgagctggatgtccctcctgtactccagccagct
gccgagcaactcagacggaaactactgaaaactgccaacctggaccttggctcatttgac
agcgaagaccctccaccaagcagccatgacgatactgttcctgataaggaggacaatgaa
ggagaggatgcgtgtaaaaaggagggggagtatacagtggaggtggagtatagaatggag
aagaaggaatggagggaggaagaagaggaggagagggaaaaagctgtgatgttttcagga
tttatctccctggactatctggagtgtgatgagaagagcgaagatttcccagactccccc
cggcctctgagtgagaccaggcacctcacggccagtgagctcctgctcaacaacatgttt
gataacgatgaaattgaagagtctgataagttcttccagtctctcccgaggcacctgaga
ctggtgtttgccctgtacaacaccatggtgtcgaagtcggagatgctgtgctactttgtg
atcatcctgaaccacatggtgtctgcctccctgctcagcctgatcctgcccatccttatc
ttcctctgggccatgctgtctgtgccacgcccaaccaagcgcttctggatgactgccatc
atctacacagagctgattgtggtggtcaagtattttttccagtttggctttttcccctgg
actacctcggcctaccgaggcatcaatgcagagcggccctttgctctgcccaacatcatt
ggggtagagaagaaatatggctatgttctctttgacttgatacaaatcctggctctgttc
ttccatcgatccattctaaagtgccacggtctttgggataacaaagaggtggagatgccg
gacttcttcaagaagttgaagaagaagacggagaagatgaagatgagtggaggagaaaaa
gcaggggatcaactgaagcgaagactaccctgcctccctctccaggcctcgactgcatcc
ttgttttgcagatgtggaaatgccaactccactgagagagatagtgatatgcagctcaaa
aagcgccactccaagaagaagaggcaccacaataaagttcccctgaccaggaaggagagg
attaaaaagctgatcagagaaaggatgctggaggctaaagctgctatcatagaagttgcc
ctgcacatatacctacccatcaggcagttcttctatgacataattcacccagagtacagc
ccagtgtgtgacgtctacgctctcatgtttctgattgacgtggtcaacttcattgtcatc
atatttggatactgggcttttgggaaacacagtgctgctgctgacatcacagatgctctt
ggggaggaccaggtcccatcggccttcctggtcatgctgctcatccagtttgggaccatg
atagtggaccgcgctctgtacctccgcaaaaccctaatgggaaaatgtgtcttccaagtg
gtgctggtgtttggtatccacttttggatgtttttcatactccctggggtgactgagagg
aggttcaacatgaaccaggtggcacagttgtggtactttgtgaagtgcatctactttggc
ctctctgcttaccagatcaagtgtggctacccaaatagtgtgctgggaaacttcctgacc
aagaactacaactacctcaacctattcctttttcaagggttccgcctagttccgttcctc
atagagctgcgtgccgtgatggactgggtctggaccgacaccaccctcagcctaggcagc
tggatctgtgtcgaggacatttatgccaacatcttcatactcaagtgctggagggagtcg
gagaagagatacccacacaccccagggcagaagaagaaaatggtggtgaagtatggcatg
ggcggattcatcatattcttcctcatcagcgtcatctggttccccctcctcttcatgtca
ttggtcaagtcagtggctggagtgaccaatcagcctctagatgtctctattcagctcagc
atagcaggatatgagccactgttcacaatgagtgcccaggagcagaacctggtgccatac
tcagtggcaggcctcaaccggctcaccaacctctatgccactcacccttcagccatgcag
ttccttgggaactacatggctgaggacattgtcattgcaaagatcaagagtgatgccagt
ctgctgtggagcatcagccctgccagccgtgacgctatgatccatgaactcagcaactcc
acccatatctacatcaccctgcgatgggtactactcaggaatgtatctctgtcgatgaac
gtggagaccattggggaacacactgtgaagtatgaggaccgtgccctgagggaccagata
gttcagatgctcaaagggacacgcagtgactctgtgatcattgagtctctcctgcccaag
ttcatcagaggtcccggaggacctgagtccaagatggccacccgtctgaaagtagaacac
tcggatcggcctgaggacctgcagacttttgccttcttctggcccctgtccatcaaacta
cagcgggcagaagacaatggaagtgcagaggggggtcagtggtggatagtggaggaatgc
actcctggacaggggctcatccagagcagctgccacagcattgagatagtggtgttcaat
gacaaagtcagccccgccagcctggatgctcttgcaggacagggaatcgtgggcctgtac
atgtcagtggtgctggtcgtcgggaagtttgtcagggaattcttcaacgggatatcccgc
tccattatgtttgaggagctgccgtgtgtggatcgggtgttgaagctctgcacggacatc
tttgtggtgcgagagactggcgagatggagctggaggaaacactgtttgagaagctaatc
ttcctgtatcgctcaccggagaccatgatcaagatgactagagagaagagcgactag
DBGET
integrated database retrieval system
