Coregonus clupeaformis (lake whitefish): 121537418
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Entry
121537418 CDS
T08357
Name
(RefSeq) iroquois-class homeodomain protein irx-3-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121537418
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121537418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
CD45
PCB_OB
Motif
Other DBs
NCBI-GeneID:
121537418
NCBI-ProteinID:
XP_041700988
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All DBs
Position
24:complement(20288281..20289789)
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AA seq
328 aa
AA seq
DB search
MPASQTGNFFERNINMPPGYQLPFLEGPAGVQQQQAPYLAAIAGVPLAYSGLQGYNFIPY
PHHRYIANMNNSFDLKAVSPYHQALLGRGGPFYPQYRPGATDDPIRVAKVATRESTSALK
AWLNEHLKNPYPTKGEKIMLAIVTKMSLTQVSTWFANARRRLKKDNRVSWASKGKSDEEE
EGESDEEEGEGSLQKSRLDDEDEIDPQTVDDKEDIGHRVSNSTPEPVNARLVKQSNNDNR
SGRLAAHAENVVKNDTERKSFPARLESKDNVECQKPKIWSLAETATSETVKKPQDSACHP
GTQVGKFWAEWASRNGLYIPVYLAHDIL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgtcacaaacaggcaacttctttgaaagaaacatcaacatgccccctggatat
cagttaccgtttttggaaggtccagctggggtacaacagcaacaagccccttatcttgct
gcgattgctggtgtacctttggcatattcaggactacagggatacaacttcatcccctat
ccacaccacagatacattgcgaacatgaacaactctttcgacctgaaagctgtctctcca
tatcatcaagcgcttctcggccgaggaggtccattctacccgcaataccgaccaggcgca
accgatgacccgatcagagtcgccaaggtggctacccgggaaagcaccagcgcgctcaag
gcctggttgaacgagcatcttaagaacccgtatcccacgaagggcgaaaagatcatgctt
gctattgtaaccaagatgagcctcacgcaggtttccacttggtttgccaacgccaggcga
cgactgaagaaggataatagggtaagctgggcgtccaaggggaagtctgacgaggaggag
gagggcgagagcgacgaggaggagggcgagggctctctgcagaaaagccgtttggacgac
gaagatgagatagatcctcaaaccgtagatgacaaggaggatattggacatagagtatcc
aactcaacgccagagccggtgaatgcgcgccttgtgaaacagtcaaacaacgacaataga
tctggtaggctcgcggcgcacgcggaaaatgtcgtaaagaatgacacagaacgcaaatca
tttccagctcgcctggaaagtaaagataacgttgagtgtcaaaagcccaaaatatggtct
ttggccgaaacagcgacctcggaaacggtgaaaaagccccaggacagtgcttgtcatcct
ggcacacaagttggcaaattctgggcagaatgggcatcaaggaacggactgtatattccc
gtataccttgctcacgatattctataa
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