Coregonus clupeaformis (lake whitefish): 121537425
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Entry
121537425 CDS
T08357
Name
(RefSeq) nuclear receptor subfamily 4 group A member 1-like
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121537425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121537425
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121537425
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
121537425
Nuclear receptors [BR:
cclu03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
121537425
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
121537425
NCBI-ProteinID:
XP_041700995
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Position
24:complement(11532013..11538311)
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AA seq
541 aa
AA seq
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MEVSIQTDQISADSLPNINPLVGTYTGEFDAYFCQIATAPTTTSPASVHESPFKLDDFQI
YSCYPGTFALSYFDEALSSGGSEYLGSPASAQSPSTPGFQPSSDWASASCPYSPSPGCWV
ADKTALSQTSSFFTYGPGSVEDLSPLGQPQPQLAEQDHFSLGLEQHPSPLSFSPLTLEPG
NLDDSGFMEGSMSLKPNSPTGNEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKKAKY
VCLANKDCPVDKRRRNRCQFCRFQKCLTVGMVKEVVRTDSLKGRRGRLPSKPKEAQDRSS
ARSPVNIIASLVRAHIESNPSVGKLDYSKYQETVASLSEKAEVGDVKQFYNLLTASMDVI
SKWAESIPGFTAFCSKDQELLLESAFVELFILRLAYRTNPETHKLIFCNGVVLHRMQCVR
GFGDWIDSIMDFSQSLHRMNLDVSSFSCLTTLVIITDRHGLKEPKRVEEFQNQLIICLRD
HVSSCTSDSTRPNYLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIVDKIFMDTLP
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgagtatccagacggaccagatctccgccgactccctgcctaacattaacccc
ctggtgggcacctacactggcgagttcgatgcctacttctgtcagatcgccacagcacct
acaaccactagccccgcttctgtccatgagtcgcccttcaagctggatgacttccagatt
tacagctgctaccctggcacctttgcactgagctactttgatgaagccctgtcttctggt
ggctctgaatatttaggcagccctgcgtcggcccagtctccctctaccccaggcttccag
ccttcatcggattgggcctcggcctcctgcccctactctcccagcccgggctgctgggtg
gctgataagactgcattatcacagacatcctctttcttcacctacggccccggctcagtg
gaggatctgtctcctctgggtcagccacagccccagctggctgagcaagaccacttctct
cttggcctggagcagcacccctcccccctttccttctcccctctaaccctggagccaggc
aacctagatgactctggcttcatggaaggtagcatgtcgctgaaaccgaacagccctact
ggaaacgagggtcgctgtgctgtctgtggggacaacgcctcctgtcagcactatggggtt
cgtacctgtgagggctgcaaaggttttttcaagcgtactgtacagaagaaagccaaatac
gtgtgccttgccaacaaggactgtccagtggacaagcggcgacggaatcgctgtcaattc
tgtcgttttcagaagtgcctgacagtaggcatggtgaaagaagttgtgagaacagatagc
ttaaaaggtcgaagaggtcgtctgccctccaagccaaaagaagcccaggaccgatcgtcc
gctcggtctccagtcaatatcattgcctctcttgtgagggcacacattgaatcaaacccc
agtgttgggaaactggactactctaagtatcaggagactgtggccagtctgtcagagaaa
gcggaagttggtgacgtcaaacagttctacaacctcctcacggcgtccatggacgtgatt
agcaagtgggctgagagcatccctgggttcaccgccttctgctccaaggaccaggagctg
ctactggagtcagccttcgtggaactgttcatcttgcgactagcatacaggaccaaccct
gagacacacaagctgatcttctgcaacggagtggtgcttcaccggatgcagtgtgtacgg
ggcttcggtgactggatagactccatcatggacttctcccagagcctccaccgcatgaac
ctggacgtgtcgtccttctcctgccttacaaccctggtcataatcactgaccgccacggc
ctgaaggagcccaagcgggtggaggagttccagaaccagctcatcatctgtctcagagat
cacgtctcgagttgcacctccgactccactcggcccaactacctgtcccgcctcctggga
aaactgcccgagctacggactctctgcacccagggcctgcagcgcatcttctatctcaag
cttgaggacttggttccaccaccccccatagtggacaaaattttcatggacactctgcct
ttctga
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