Coregonus clupeaformis (lake whitefish): 121537466
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Entry
121537466 CDS
T08357
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4-like isoform X1
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121537466
04082 Neuroactive ligand signaling
121537466
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121537466
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
121537466
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
121537466
NCBI-ProteinID:
XP_045062813
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Position
24:complement(34601994..34616324)
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AA seq
584 aa
AA seq
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MMTTNVWVKQEWNDYKLRWKPEEYENVTSIRIPSEIIWRPDIVLYNNADGDFAVTHLTKA
HLFYDGRIKWMPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDRAKIDLISIASDVDQM
DYWESGEWVIINAVGKYNTKKYECCTEIYPDITYYFIIRRLPLFYTINLIIPCLLISCLT
VLVFYLPSQCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSI
IITVFVLNVHHRSPRTHGMPQWVRRVFLDLVPRVLFMKRPPATAKQNCRKLIEMMHQTSS
STAAGQSQSFWAGVETGLGQLGHTLPATHSDSSNILALSPSPSPSPPQGLPLEEHPLKAP
QPFCRSPSSQYSILLEEPGKLGNTASPLSCSTHSSTPSSSSPPSLLLGPLGPVHSLPRDE
QRILSPNGRSHSVENVFDQREPNREPPQRAGHCCRSHSFQYCCLHEEGGGVAGGGKGRGA
VGEGRLKRQVLLDQLGRASSTEPTMGLVIRETMVPTISPSMRRAIEGVQYIADHLRAEDA
DFSVKEDWKYVAMVIDRIFLWMFVLVCILGTLGLFLPPWLAGMI
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgaccaacgtctgggtaaaacaagagtggaatgattataagctccgctggaag
ccagaggagtacgagaacgtcacctccatccgcatcccatcggaaatcatctggaggcct
gatattgtgctttataacaacgctgatggtgacttcgcggtgacccacctgaccaaggcc
cacctgttctacgacgggcgcatcaagtggatgccgccggccatctacaagtcctcttgc
agcatcgacgtcaccttcttccccttcgaccagcagaactgcaagatgaagtttggctcg
tggacttacgaccgtgccaagatcgacttgatcagtatagccagtgacgtggaccagatg
gactactgggagagcggcgagtgggtgatcatcaacgccgtgggcaagtacaacaccaag
aagtacgagtgctgcacagagatctaccccgacatcacctattacttcatcatccgcagg
ctgccgcttttctacaccatcaacctgattataccatgtttgttgatctcctgtctgact
gtcttggtgttctatctgccctcccagtgtggcgagaagatcaccctgtgtatctctgtg
ttgctgtctctcaccgtcttcctcttgctcattactgagatcatcccgtccacctcgctg
gtcatcccgctcatcggcgagtacctcctcttcacaatgatcttcgtcaccctctcaatc
atcatcaccgtctttgtgctcaatgtgcaccatcgctcgccgcgcacccacggcatgcct
caatgggtgcggcgggtcttcctggacctggtgcctcgtgtgcttttcatgaagcggcca
ccggccaccgccaagcagaactgccggaagctgattgagatgatgcaccagaccagctcc
tcgacagcagccggtcagtcgcagtctttctgggccggggtggagacggggctaggacag
ctaggacacacactgcctgccacccactctgacagctccaacatcctggccctttcccct
tcgccctccccctctcctccccagggcctgcccttggaggagcaccccctcaaggccccc
cagcccttctgccgctctccttccagccagtactccatcctcttggaggagcctggcaag
ctcgggaacaccgcctcccctttgtcctgctcaacccactcctccaccccgtcctcctcc
tcccccccgtctctgctgctgggtcccctgggtccagtccactctctgccccgggacgag
cagcgaatactctcccccaacgggcggagccacagtgtagaaaacgtgtttgaccagagg
gagcctaaccgggagcccccccagagggccgggcactgctgccgctcccacagcttccaa
tactgctgcctgcacgaagaagggggtggggttgctggtggtggcaagggccgaggggct
gtaggtgaaggaaggctaaagagacaggtcctgctagaccaactaggtagagcctcctcc
acagagcccaccatgggtctagtgatccgggaaaccatggtccccacaatatccccgtcg
atgagaagggccatagagggcgtgcagtacattgctgaccacctcagggcagaggacgct
gacttctcagtaaaggaggactggaagtatgtggccatggtcattgacaggatatttctc
tggatgtttgtactagtgtgtatactgggaacactgggactattccttcctccttggctg
gctggaatgatctag
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