Coregonus clupeaformis (lake whitefish): 121537481
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Entry
121537481 CDS
T08357
Name
(RefSeq) transcription factor HES-4-B isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03460
Fanconi anemia pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121537481
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121537481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121537481
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121537481
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121537481
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
121537481
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
121537481
NCBI-ProteinID:
XP_041701037
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Position
24:31849381..31851249
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AA seq
290 aa
AA seq
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MPADTMEKQTASPIAGTPANGSHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALSADTTVLSKYRAGFNECMNE
VTHFLSTSEGVNTEVRSRLLNHLSGSLGQMISMNYPQSTPTQQAHLAQPLHVQLPSTLPN
SVSMGSKLSTVESLSPKVFGGFQLVPATDGQFAFLIPNPAFASSSTPVIPLYANAGVPMT
VNASPVHRSSAPTASSPVHGMTSFVGVSQAVSPVGVSTGSESTEAVWRPW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgacaccatggagaagcaaacggcatcccctattgctggtacacctgcaaat
gggtcccatactccagacaaacccaagaatgccagcgagcatagaaagtcctcaaagccc
atcatggagaaacgtaggagagcgaggataaacgaaagccttggccaactcaagacactc
atcctcgatgcacttaaaaaagatagttccagacattctaaattggagaaagccgatatt
ctggagatgacagtgaagcacttacggaatttacagcgtgtgcagatgactgcagcgctg
tcagcagacactaccgtcctcagtaaataccgggcgggattcaacgaatgcatgaatgag
gtcactcacttcttgtccaccagcgagggggtgaacacggaggtgaggtcgcggcttctc
aaccacctgtccggttccctaggccagatgatctccatgaactacccccagtcaacccca
actcaacaggctcaccttgcgcagcctcttcacgtgcagctaccttctaccttgcccaac
agtgtctctatgggttccaaactcagcaccgtggaatccttgtctcctaaagttttcggg
gggttccagcttgtgcctgccaccgacggacagtttgctttcctgattcccaaccctgca
ttcgcctcatcatcaaccccagtcatccctctgtatgctaacgcaggtgtgcctatgaca
gttaacgccagtcccgtccaccgcagctctgcgccaacagcatcatccccagtccatggg
atgacatcattcgtcggtgtttctcaggccgtcagccctgtcggtgtcagcactggttcg
gagagcactgaggctgtttggcgaccctggtag
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