Coregonus clupeaformis (lake whitefish): 121537486
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Entry
121537486 CDS
T08357
Name
(RefSeq) partitioning defective 6 homolog beta-like
KO
K06093
partitioning defective protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121537486
09144 Cellular community - eukaryotes
04530 Tight junction
121537486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121537486
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
121537486
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
121537486
NCBI-ProteinID:
XP_041701041
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Position
24:30395103..30430593
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AA seq
390 aa
AA seq
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MNKNHRVPSNRTLSAVEVKSKFGAEFRRFSLDRSKPGRFDEFYGLLQHVHRIPNVDLLVG
YADVQGDLLPINNDDNYHKAISVASPLLRLFLQRKEEADYSAFGTDSLTRPKKTVLAAVL
LRPDANRKKPPVIISLPRDFRPVSSIIDVDILPETHRRVRLYKHGQEKPLGFYIRDGSSV
RVTPQGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVQGKSLDQVTDMMIANS
HNLIVTVKPANQRNNIIRSSGGGGGVASGSSGRSSDSGASFYGYFTPGAAIATTPAHIMQ
NFHPEELESDEDDEDLVIEADGEAVPIPRAALASCSMPSLPRYEPHLNLRTTANGALASS
NSTGSLSTVSTPDRGLEGRSLEEDGTVITL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaccaccgagtgccgagcaaccgaactctgagcgccgtggaggtgaagagc
aagtttggggccgaattccgtcggttctccctggaccggtcgaagccgggtcggttcgac
gagttctatggactcctgcagcacgtgcaccggatccccaacgtggacctgctggtgggt
tacgccgacgtccaaggcgacctgttgccaatcaacaacgatgacaactaccacaaggcc
atctctgtggctagcccgctgctacggctcttcctgcagaggaaagaggaagcagactac
tctgcgtttggtacggactctctgacccgtcctaagaagacggtcctagcggccgtgttg
ctgcggcctgatgccaaccggaagaagccccctgtgatcattagcctgcccagggacttc
aggcccgtctcctccatcatcgacgtggacatcctccctgagacacaccgccgggtgcgc
ctctacaagcacggccaggagaaaccgctgggcttctacatccgcgacggctccagcgtc
cgggtcacgccccagggcctggagaaggtgcctgggatcttcatctcccgcatggtgcct
gggggcctggctgagagcacaggcctgctggccgtcaacgacgaggtgcttgaggtcaat
ggtatcgaggtgcaaggcaagtctctggaccaggtgactgacatgatgatcgccaacagc
cacaacctcattgtgacggtgaagccagccaaccagcgcaacaacatcatacggagcagt
ggcggagggggtggggtggcttccgggagctcgggtcgctcttccgacagcggcgccagt
ttctacggctatttcaccccgggcgctgccatagcgacgaccccggcacacatcatgcag
aacttccatccagaggagctggagagtgatgaggatgatgaggacctggtgatagaggca
gacggggaggccgtgcccatcccacgggcagccttggccagctgcagcatgccctcactg
ccccgctacgagccccatctgaacctccgcaccacggccaacggagccctggcctccagc
aacagcaccggttcactgagcacggtcagcacgcccgataggggcctagagggaaggagc
ttagaggaggacggcacagtcatcacgctgtag
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