Coregonus clupeaformis (lake whitefish): 121537553
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Entry
121537553 CDS
T08357
Name
(RefSeq) mimecan-like
KO
K08126
osteoglycin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cclu00535
]
121537553
Proteoglycans [BR:
cclu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
121537553
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
SlpA
LRR_9
Motif
Other DBs
NCBI-GeneID:
121537553
NCBI-ProteinID:
XP_041701094
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Position
24:45648866..45651289
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AA seq
270 aa
AA seq
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MMNLRTFFFTIILLPWMLSSAARNGNMEARKPKKEVVTIPDYDTAGDSNTSPASVPKEEG
ELPTCLLCVCLTGSVYCEEVSPEMTAVPSLPKETAYLYARYNKITKITNKDFADIATLRR
IDLTGNLISEIEDGAFSKLALLEELNLSENKLAKLPMLPAKLVSFNANYNQLKTKGVKST
AFKKLTKMAYLYLGNNELEAIPQLPESLHIVHLYNNKITTLSDETFCPVNNTQYIRANMV
EVRLDGNPLMLAKHPNSFVCLRALPIGPYH
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacctgaggactttctttttcaccatcattctgctgccatggatgctatcttct
gcagcaagaaatggaaacatggaagcaaggaaacctaagaaagaggttgtgaccatccca
gactatgacaccgctggagactcaaatacaagcccagcatcagttcctaaagaagagggt
gagctacccacgtgcctgctgtgtgtgtgtctgactgggtcggtatactgtgaggaggtc
tcccctgagatgacagcagttccatccctgcccaaggaaactgcctatctctacgcacgc
tacaacaaaattaccaaaatcaccaacaaagactttgcagacattgcaacgttgagaaga
atcgatctgactgggaacctaatctctgagatagaagatggagctttctcaaagcttgcc
ctccttgaagagctcaatctctcagagaacaagctggccaaactacccatgttacctgcc
aaacttgtgtccttcaatgccaattacaaccaacttaaaaccaagggtgtaaaatcaacc
gcttttaagaaactcactaagatggcgtacctctaccttggcaataacgagctggaggcg
atcccacaacttccagagagtctccacattgtgcacctatataacaataagatcaccacg
ctatcggatgagaccttctgcccagtcaacaatactcagtacatcagagccaacatggtg
gaggtgagactggacggcaaccctctgatgctggccaagcatcccaacagctttgtctgc
ctcagggccctgcccattggaccgtaccactga
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