Coregonus clupeaformis (lake whitefish): 121537624
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Entry
121537624 CDS
T08357
Name
(RefSeq) ras-related protein Rab-6B
KO
K07894
Ras-related protein Rab-6B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121537624
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121537624
04031 GTP-binding proteins [BR:
cclu04031
]
121537624
Membrane trafficking [BR:
cclu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
121537624
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121537624
GTP-binding proteins [BR:
cclu04031
]
Small (monomeric) G-proteins
Rab Family
Rab6/41 [OT]
121537624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
SRPRB
FeoB_N
Gtr1_RagA
ATP_bind_1
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
121537624
NCBI-ProteinID:
XP_041701142
LinkDB
All DBs
Position
11:complement(28295491..28468860)
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AA seq
208 aa
AA seq
DB search
MSVGSDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR
TVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVI
IMLVGNKTDLGDKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAALPGMEST
QEASKEGMIDIKLDKPQEPPTTEGGCSC
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgggtagtgactttggcaaccccttaagaaaattcaaactggtatttctggga
gagcaaagcgttgggaagacgtctctgatcacgcggttcatgtatgacagctttgacaac
acatatcaggccacaatcggaatagacttcctgtcaaaaaccatgtacctggaagaccga
acggtgaggttgcagctgtgggacacggcaggacaggagcgcttcaggagtctcataccc
tcctacatacgagactctactgtggccgtggtggtgtatgatattacaaatgtgaactcc
ttccagcaaacatccaaatggatcgatgacgtcagaacagaaagagggagtgatgtcata
attatgctagttggcaacaaaacagacttgggagacaagaggcagatcaccatagaggaa
ggagaacagcgggccaaggagctcagcgtcatgtttattgagaccagcgccaagacaggc
tacaacgtcaaacagctgtttcggcgtgtggcggctgcccttcccgggatggagagcacg
caggaggcgagcaaagagggaatgattgacatcaagctggacaaaccgcaggagcctcca
accactgaaggcgggtgttcctgttga
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