KEGG   Coregonus clupeaformis (lake whitefish): 121537634
Entry
121537634         CDS       T08357                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA excision repair protein ERCC-5
  KO
K10846  DNA excision repair protein ERCC-5
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    121537634
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121537634
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     121537634
SSDB
Motif
Pfam: XPG_N XPG_I DUF6879
Other DBs
NCBI-GeneID: 121537634
NCBI-ProteinID: XP_045062722
LinkDB
Position
24:complement(1233274..1264167)
AA seq 1097 aa
MGVHGLWKLLEGTGKPINPETLEGKILAVDISIWLNQAVKGVRDREGNSVQNAHLLTLFH
RLCKLLFFRIRPVFVFDGDAPLIKKQTLAIRRQRKEEKTMESKQTNDKLLKTFLKRQAIK
AALGEESHDHLPSLSGVRREEDMYMLPALPALEERERGSSEEEQEEEEDSHHIYQGDFYE
DSNSVDINSEEFSAMPPEVKHEILKDMKEFSKRRRTMYHTPPERSGDFSQYQLAGLLQRK
QAGQRVVGVEREMSNRSAGNAPGVELYNQGEGHSVETRRLLSEDSTHYILIKGPKKTDNS
ERVPDVQPAASPWLGGPLSGRVRAGEGRDLSPFGDPSQRRRAWRRDLVIHPLPRTLKAIQ
AAMDASFSDEEEGSSWGRGGSRAGEEGSSWGRAGEEGGSWGRGGSRAGEEGSSWGRAGEE
GSSWGRGGSRAGEEGSGSVSPRTILAIQRAMGEDLDVGTPPNTTLIGNSPVKPHPPSPQR
PANRLVVTSSSEEETEGKDTPLRTTLTNEDRLGVEKGDEQQSPLPPSLPIPPADRVLLNR
EEEDETLTRRTREEVEEILRSNREELRQAINSRNRAFHSAVGQEDSLGQALSVIPPSGPG
LNREKERERSSLVTGPLPPSQQERERSSLETGPLPPSQQERERSSLETGPLPPSQQERER
SSLETGPLPPSQQERNGHDTNTREERNGEIVKMEDSEEESDSESFVDVSEGEELKEEETD
DSLIEVGGGAPPKAQEDVTKKEEEEEEEEALSSRAVPLEERDDDDEEEEEALQRPTEPSP
ASVPVPNEWEDINVDELVALESRLGEQQSSLREQKQQQERVAATVTGQMCLESQELLRLF
GVPFLVAPSEAEAQCAALDRTDHTHGTITDDSDVWLFGGRHVYKNFFSQNKYVEHYQYID
LQNQLGVDRTKLINLAYLLGSDYTEGIPGVGYVTGMEILNEFPGPGMEPLSMFSEWWSLA
QQQRLTSDPRDSKVKRKLRGLQLQPGFPNPAVATAYLQPSVDLSEGSFSWGRPHLDLIKE
FCQSRFGWNSRKTEETLQPVITQINTQQTQLRIDSFFRLEQQERQAIKSQRLRRAVTCMK
RKEREEEGRGDLLPVQG
NT seq 3294 nt   +upstreamnt  +downstreamnt
atgggggtgcacgggctgtggaagctgctcgagggcaccgggaagcccatcaaccccgag
actctcgagggcaagatcctggctgtcgacatcagtatctggttgaaccaggcagtgaag
ggggtgagagacagggagggtaacagtgtccagaacgcccacctcctcaccctgttccat
cgcctctgtaaactactcttcttccgcatcagacccgtctttgtgttcgatggagacgca
cctctgatcaagaaacagaccctggccatcagaagacagaggaaggaggagaagactatg
gagtccaaacagaccaatgacaaactcctcaagaccttcctgaagagacaagccatcaaa
gctgctctgggagaggagagtcacgatcatctgcccagcctgtctggtgtgaggagagag
gaggacatgtacatgctgcctgccctgccagccctggaggagagagagaggggcagctca
gaggaggagcaggaggaggaagaggacagccatcacatctaccagggtgatttctatgaa
gactctaactctgtggacatcaactctgaggagttttctgccatgcctcctgaggtgaaa
catgagatccttaaagacatgaaggaattcagcaagagacgacgcaccatgtaccacaca
cctcctgagcggtcaggtgacttctcccagtaccagctagcagggctgctgcagaggaag
caggctgggcagcgcgtcgtgggcgtggagagagagatgtccaaccgcagtgcagggaac
gccccgggggtggagctatacaaccagggggaggggcacagcgtggagacacgacgcctc
ctctcagaagactccacccactacatcctcatcaaaggtccaaagaagacagacaacagt
gagagggttccagacgtccagcctgcggcctctccctggttgggtggtcctctgtcaggg
agggttagggcgggggaagggagagacctgagcccctttggagacccatctcagaggagg
agagcctggaggagggacctcgtcatccaccccctcccccggacactgaaggccatccag
gctgcaatggatgccagcttctcagacgaggaggagggtagctcctggggtaggggtggg
agtagggctggggaggagggtagctcctggggtagggctggggaggagggaggctcctgg
ggtaggggtgggagtagggctggggaggagggtagctcctggggtagggctggggaggag
ggaagctcctggggtaggggtgggagtagggctggggaggagggtagtggcagtgtgtcc
cctcgtaccatcctggccattcagcgagctatgggagaagacttggatgtaggcacgccc
ccaaacaccaccctgattggtaattctcccgttaagccccaccctcccagtccccagcgt
cctgcgaaccgattggtcgtcaccagcagctcagaggaggagactgaagggaaggacacg
cccctgaggacaactctgaccaatgaggacaggcttggggtggagaagggggatgagcaa
cagtcgcctctcccccctagcctccccattcctcctgcagacagggtgctcctcaacagg
gaggaggaggatgaaaccctcaccaggaggaccagggaggaggtggaggagattctgagg
agtaacagagaggagttaaggcaagccatcaacagcaggaacagggctttccactctgca
gtaggtcaggaggacagtttgggtcaggctctcagtgttatccccccatcaggcccaggt
ctaaacagagagaaggagagggagaggagtagcctggtgactgggcctttacctccatca
cagcaggagagggagaggagtagcctggagactgggcctttacctccatcacagcaggag
agggagaggagtagcctggagactgggcctttacctccatcacagcaggagagggagagg
agtagcctggagactgggcctttacctccatcacagcaggagaggaatggacacgacacc
aacaccagggaggagagaaatggagagattgtgaagatggaggacagtgaggaggagagc
gattcagagagcttcgttgacgtgtccgagggggaggagctaaaggaggaggagacggac
gattcactgatagaggtggggggcggtgctccacctaaggcacaggaagacgtgaccaag
aaggaggaagaggaagaagaggaggaagctttaagtagcagagctgtccctttggaagag
agggatgatgatgatgaggaggaggaggaagctctccagcgtcccacagagcccagccca
gcttctgttcctgtacccaacgagtgggaagacatcaacgtggatgagctggtggcgcta
gagagccgtctaggagagcagcagtccagtctgagagaacagaagcagcagcaggaacgt
gtggccgccacggttaccggacagatgtgtctggagagccaggagctgctgaggttgttc
ggcgtgcccttcctggtggctcccagtgaggcggaggcccagtgtgctgccctggaccgg
accgaccacacccacggaacaatcaccgatgacagcgacgtatggctgttcggaggacga
cacgtctacaagaacttcttcagccagaacaaatatgtagaacactaccagtacatagac
ctacagaaccaactgggtgtggaccgtaccaagctgattaacctggcctacctgctgggt
agtgactacacggaggggatcccgggggtgggatacgtgacgggcatggagatactcaac
gagttccctggacctggcatggaaccactcagcatgttcagtgagtggtggtccttggcc
cagcagcaacgtctgacctctgacccccgtgactccaaggtcaagaggaagctgagaggg
ctccagctgcagccgggcttccccaaccctgccgtggcaactgcctacctgcagcccagt
gtcgacctatcagaaggctcctttagctggggccgcccacacctcgacctcatcaaggag
ttctgtcagagtcgttttggttggaacagcaggaagacagaagagactctacagcctgtt
atcacacagatcaacacacaacagacccagctgcgtatcgactcgttcttccgtctggag
cagcaggagagacaggccatcaagagccagcgtctccgccgagccgtcacctgtatgaag
aggaaggagagggaggaggaagggagaggggatctgctccccgtccaaggctaa

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