Coregonus clupeaformis (lake whitefish): 121537646
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Entry
121537646 CDS
T08357
Name
(RefSeq) actin-related protein 3
KO
K18584
actin-related protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04530
Tight junction
cclu04810
Regulation of actin cytoskeleton
cclu05100
Bacterial invasion of epithelial cells
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121537646
09144 Cellular community - eukaryotes
04530 Tight junction
121537646
09142 Cell motility
04810 Regulation of actin cytoskeleton
121537646
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121537646
05100 Bacterial invasion of epithelial cells
121537646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121537646
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121537646
04147 Exosome [BR:
cclu04147
]
121537646
Membrane trafficking [BR:
cclu04131
]
Others
Actin-binding proteins
Arp2/3 complex
121537646
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
121537646
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121537646
Exosomal proteins of other body fluids (saliva and urine)
121537646
Exosomal proteins of bladder cancer cells
121537646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
FtsA
Robl_LC7
ALP_N
Motif
Other DBs
NCBI-GeneID:
121537646
NCBI-ProteinID:
XP_041701159
LinkDB
All DBs
Position
1:92733701..92745549
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AA seq
418 aa
AA seq
DB search
MAGRLPACVVDCGTGYTKIGYAGNTEPQFIVPSCIAIKESAKVGDQAQRRMMKGVDDLDF
YIGDEAIDKPNYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTP
ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQLGERTLTGTVIDSGDGVTHVIPV
AEGYVIGSCIKHIPIAGRDITYFTQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVK
EFNKYDTDGSKWIKQYTGINSISKKEFTIDVGYERFLGPEIFFHPEFANPDFTQPISEVV
DEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDGRLKLSEELSGGKLKP
KPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgtctaccggcttgtgtagttgactgtggcacagggtacacaaagattgga
tatgctggaaacacagagccacagtttattgttccgtcatgtattgccatcaaagagtca
gccaaggttggagaccaagcccagcgcaggatgatgaagggggtggacgatctggacttt
tacattggtgacgaggcaatagacaaaccaaattatgcaacaaagtggcccattcgtcat
gggatcgtggaagactgggatctcatggagaggttcatggaacaggtcatcttcaagtat
ctgcgggcagagcccgaagaccactacttcctcttgacagagcctcctttgaatacccct
gaaaacagagagtacacagcagagattatgtttgagtccttcaatgttccaggtctttat
atcgctgtacaggcggtcctggcgctggcagcctcctggacctccagacaattgggcgag
aggaccctgactgggacggtgattgacagcggtgatggggtcacccacgtcatcccagtg
gcggaaggctacgtcatcggtagctgtataaagcacatccccatcgctggtcgagacatc
acctacttcacccagcagctgctgagagagagggaggtgggcatcccaccagagcagtca
ttggaaacagccaaagccgtcaaggaaaggttcagctatgtctgccctgacctggtgaaa
gagttcaacaagtacgatacggacggctccaagtggatcaagcagtacacgggcatcaac
tccatcagcaagaaggagttcaccatcgacgtgggctatgagcgcttcctcggccccgag
atcttcttccacccagagtttgccaaccctgacttcacccagcccatctcagaggttgtt
gatgaggtcattcagaactgccctattgacgtcagacgtcctctctataagaacattgtg
ctctctggaggctccactatgttcagggactttggccgtcgtctgcagagggacctgaag
aggacagtggacggcagactgaaactcagtgaggaactgagcggtggcaaattgaagccc
aaacccatcgacgtgcaagtcatcactcaccacatgcagagatacgctgtttggttcggc
gggtccatgttggcatcaactccggagttttaccaagtgtgccacaccaaaaaagactat
gaggagattggaccgagcatctgccgccataaccctgtcttcggggtcatgtcttaa
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