Coregonus clupeaformis (lake whitefish): 121537677
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Entry
121537677 CDS
T08357
Symbol
itgb6
Name
(RefSeq) integrin beta-6
KO
K06589
integrin beta 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04512
ECM-receptor interaction
cclu04810
Regulation of actin cytoskeleton
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121537677 (itgb6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121537677 (itgb6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121537677 (itgb6)
04810 Regulation of actin cytoskeleton
121537677 (itgb6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121537677 (itgb6)
04515 Cell adhesion molecules [BR:
cclu04515
]
121537677 (itgb6)
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121537677 (itgb6)
Cell adhesion molecules [BR:
cclu04515
]
Integrins
Integrin beta subunits
121537677 (itgb6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
PSI_integrin
I-EGF_1
EGF_integrin
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
121537677
NCBI-ProteinID:
XP_041701194
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MGIAVLLVLILRHWINNVEGTCSVGSAVTCDECLQLGPHCAWCTQENFTDSFLISERCDT
PYVLQERGCPQDQVEFPVTISEVHRDQPLGKKTGNTNSTQISPQKMALKLRTGSEVTFQI
SVQQTEDYPVDIYYLMDLSASMIDDLEMIKDLGSTLSKEMAKLTSKFRLGFGSFVEKPVL
PFIKITPGELENPCRSVDESCLPTFGYKHVLPLTSSTEKFNDIITNQRVSANIDLPECGF
DAIMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMSGIVIPNDGECHLDSNNEYSM
AAHLEYPTLGQLMDKLVENNILLIFAVTENQKHNYENYAHFIPGATVGVLESDSRNILEL
IVTAYKELRSEIELEILGDTEDLQISFTAICQDGTVLPGQKLCSNVKAGDTVSFNVTVEL
SECLDGPQHFLIKPVGFQDPLELELESLCSCPCHQTPEPNSSHCSLGRGSLECGSCLCDP
GYMGSKCECMEESTQSSNCKASGAAELCSGQGECYCGQCVCQPSSFGRIYGAYCECDDFS
CVRFRGVLCGGHGDCDCGECVCLSGWTGEYCNCSSSRDTCVSEDGALCSGRGKCVCGKCV
CSMPGASGDTCERCPTCGDSCSSARTCVECHLQAEEEATEECVQRCSVSHVFINNSTEYD
ESQSMLCNLKSENECFISFNVVAGDTGSTVYNLKMYDCPEPPNIAMIVLGVSLSILTIGL
ILLGVWKLLISVHDRKEVAKFEAERAKAKWQSGTNPLFRSSTSTFKNVTYKSAGGPKVDI
HSMDGY
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggggattgcagtacttctggtcctgattcttcggcattggatcaacaacgtggaggga
acatgttcggttggcagtgcagtgacttgtgatgagtgtctccagctgggtccccactgt
gcatggtgcacacaagagaatttcacagactcgtttttaatcagtgagcgatgtgacacg
ccatacgtcctccaagagaggggctgtccccaggaccaggtagaattccctgtgaccatc
tccgaggtccaccgggaccagcctctcgggaagaagacggggaataccaacagcacacag
atatcgccacagaagatggccctcaaactcagaactggcagtgaggtgaccttccagatc
agtgtgcagcagacagaggactaccctgtagacatctactacctgatggacctctcagcc
tccatgattgacgacctggagatgattaaagacttgggctccaccctgtccaaggagatg
gcaaagctcaccagtaaattcagacttggattcgggtccttcgttgagaaaccagtcctc
ccgttcattaagatcactcctggagagttggagaacccttgcaggagtgtggatgagagc
tgtctgccaacgtttggatacaaacacgtcctacccctcaccagcagcacagagaagttc
aacgacatcatcaccaaccagcgtgtgtctgccaacatcgacctgccggagtgtggcttc
gatgccatcatgcaggctgctgtctgtggggacaagataggctggaggaacgactccatg
cgtctgttggtgtttgtgagcgacgccgactctcactttgggatggacagcaagatgtca
ggcatcgtcatccctaacgacggggagtgccatctggacagcaacaatgaatactctatg
gctgcccatctggaatacccaactctgggacagctgatggataaactggtggagaacaat
atcctgcttatattcgctgtgacggaaaatcagaaacacaactacgagaactatgcacat
ttcatacctggtgccacggtgggggttttggaatcagattcaaggaacatcctggaactg
attgtgacagcgtataaggagctgcggtctgagatagagctggagatactaggagacact
gaggatctacagatctccttcacagctatctgtcaggatggaacggtactacctggacag
aaactatgctccaacgtcaaagctggagacacggtctccttcaacgtgactgtagaactc
tcggagtgtctcgacggtccccagcacttcctcatcaaaccggtgggcttccaggacccc
ctggagttagagctggagtccctgtgctcctgtccctgtcaccagacccccgagcccaac
agcagccactgcagcctgggccggggatctctggagtgtggctcctgcctgtgtgatcca
gggtacatggggtccaagtgtgagtgtatggaggagagcacccagagcagtaactgcaag
gccagtggcgctgcagagttgtgtagcggacaaggggagtgttactgtggccagtgtgtg
tgtcagccgtcgagtttcggacgcatctacggggcctactgcgagtgtgacgacttctcg
tgtgtgaggttccgaggggtactctgtggaggtcacggggactgtgactgcggcgagtgt
gtgtgtctgagcggctggacgggggagtactgtaactgcagcagcagcagggacacgtgt
gtgtcggaggacggagcgctgtgcagcggacgggggaagtgtgtgtgcgggaagtgtgtg
tgttccatgcccggagcctctggagacacctgtgaaaggtgccctacctgtggagactcc
tgtagctctgctaggacctgtgtggagtgtcatctacaagcagaagaggaggccacagag
gagtgtgtccaaaggtgcagcgtctctcacgtcttcatcaacaattccacagagtacgat
gagagccagtccatgctgtgtaacctaaagagcgagaacgagtgcttcatctctttcaat
gtggtggctggggacacagggagcactgtgtataatctaaagatgtacgactgtcctgag
cccccaaacatagctatgatagtactgggggtctctctgtccatcctcaccatcggcctc
atcctgctgggggtgtggaagctgctgatctcagtccacgaccgcaaagaggtcgccaag
tttgaggccgagagggcaaaggctaaatggcagtcgggtacaaaccctctgtttagaagc
tcgacgtcaacatttaaaaatgtaacttataaaagcgcagggggaccgaaagttgatatt
cattcaatggatggctactga
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