Coregonus clupeaformis (lake whitefish): 121537683
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Entry
121537683 CDS
T08357
Name
(RefSeq) ski oncogene-like
KO
K26503
Ski oncogene
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121537683
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Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
NusG
Motif
Other DBs
NCBI-GeneID:
121537683
NCBI-ProteinID:
XP_041701209
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All DBs
Position
24:complement(50929977..51038708)
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AA seq
723 aa
AA seq
DB search
METVTRQSFQPHPGLQQTLKQFHLSSMSSLGGPAAFSARWPHDLLFKKDGKEPEPVLHLP
MQPRTVMPGPLFIPSDRSTERCETVLETETVSCFVVGGEKRLCLPQILNTVLRDFSLQQI
NSVCDDLHIYCSRCTAEQLEILKVMGILPFSAPSCGLITKTDAERLCNALIYGGTYPPHC
KKEFTGSLELEFTEKSLKIYHECFGKCKGLFVPELYTSPNAACIQCIDCRLMYPTHKFVV
HSHKSLENRTCHWGFDSANWRAYILLGQDYTGKEERARLEQHLDDIKEKFDFANKYKRKA
SRASDPIPAKKSKHEDFPSLPLSEKQPDWLRSLSASANKTLNFFQPRQRPSAFRPWSPNL
SAGDKDTPSHPLALLRDSLYNFKTMENAVSPNVALTPPPLTKAGPLLSPSVPSTSHPSTG
EATGKGASPISRPRKRRATGEPPCPPSAVASKPPPQEDKDSEVEIEVESREEFTSSLSSL
SSPSFTSSSSAKDMSSPGAQVPVCTVTSAVLSPVGGPLAGVAAVVLAPEGPGPGGLESEL
EIMRQALDSGLDSKESKEKFLHEIVKMRVKQEEKLGSALQAKRSLQQELEFLRLAKKEKL
REATEAKRNLRKEIERLRAESEKKMKEANESRVHLKRELEQARQLRVCDKGCEAGRLRTK
YSAQMEDLQMKLQHAEADREQLRADLLQEREAREHLERVVKELQQQLWPKEQDTPTKDTP
VNN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggagactgtaactcgacaaagcttccaacctcacccaggactgcaacaaactctcaag
cagtttcatttgagttctatgagctccctcggcggaccggcggcgttttctgctcgatgg
ccacatgacctcctgttcaagaaggatgggaaagagcccgagcccgtgctgcatcttccc
atgcagccgcggacagtgatgccgggacccctcttcatcccctccgaccgctccacggag
aggtgcgagacggtcctggagaccgagactgtctcctgtttcgtggtcggcggcgagaaa
cggctgtgcttgccgcagatcctcaacaccgtactgcgggatttctcccttcaacagatc
aactcggtgtgcgacgacctccacatctactgctccaggtgcacggcggaacagctggag
atcctcaaagtcatggggattctccccttctctgcgccttcctgcggactcatcaccaaa
acggatgcggagcgcctgtgcaatgccctgatttacgggggcacctacccgccgcactgc
aagaaagagttcacgggctcactggagctggagttcacggagaaaagcctcaaaatatac
cacgagtgttttggaaagtgcaagggtctcttcgtcccggagctgtacaccagccccaac
gcagcctgcatccagtgcattgactgcagactcatgtacccgacccataaattcgtggtg
cacagtcacaaatcgttggaaaacaggacttgccattggggcttcgactccgccaactgg
agggcatacatcctcttgggccaggattacacggggaaggaggagagggcgcgcctagag
cagcatttggacgacattaaagagaaatttgacttcgccaacaaatataagaggaaagca
tccagggcatcagatcccatcccagccaagaagtctaaacatgaagacttcccatcgctg
cccctgtccgagaagcaacccgattggctacgatccctctcggcttcggccaataagact
ctcaactttttccagcccagacaaaggccctcggctttcaggccctggtcccctaacctc
tcagctggggacaaagacacgcccagccaccctctggctctcctgagagacagcctctac
aacttcaagaccatggagaacgctgtgtccccaaacgtggccctcacgcccccacccctg
acaaaggcagggcccctgttgtccccatctgtgcctagcacctcccaccccagcaccggc
gaggccacaggaaagggggccagccccatctccaggccccggaagaggagggccacaggg
gagcccccctgtcccccatcggctgtagccagcaagcctccaccccaggaggacaaggac
tcggaagtggagatcgaggtggagagccgagaggaattcacttcctccctgtcctccctg
tcctccccatccttcacctcctccagctcagccaaggacatgagctcgcccggcgcccag
gtcccggtgtgtacggtgacttctgcagtgttgagccccgtgggtggccctctcgctggg
gtagcggcggtggtgttggcccctgagggccccggccccgggggtctggagtcggagttg
gagatcatgaggcaggcgctggacagcgggctggactccaaggagtctaaggagaagttc
ctgcatgagatcgtcaagatgagggtgaagcaggaggagaagctgggctcagccctgcag
gccaaacgcagccttcaacaggagttggagttcctgcggctggctaagaaagagaagctc
agggaggccacggaggccaagcggaacctgaggaaggagattgagcgccttcgcgccgag
agcgagaagaagatgaaggaggctaacgagtcgcgcgtgcatctgaagagggagctggag
caggcccggcagctccgagtgtgcgacaagggctgcgaggcgggccgtctgcgcaccaag
tactcggcacagatggaggacctgcagatgaagctccagcatgccgaggcggaccgcgag
cagctccgggcagacctactgcaggagcgggaggccagggaacacctggagagagtggtc
aaggagctgcagcagcagctgtggcccaaggagcaggacacgcctaccaaggacaccccc
gtcaacaactaa
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