Coregonus clupeaformis (lake whitefish): 121537695
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Entry
121537695 CDS
T08357
Name
(RefSeq) TBC1 domain family member 22B isoform X1
KO
K20360
TBC1 domain family member 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121537695
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
121537695
Retrieval pathways
121537695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
121537695
NCBI-ProteinID:
XP_041701228
LinkDB
All DBs
Position
24:complement(49966642..49984150)
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AA seq
516 aa
AA seq
DB search
MATDNRIHFWRKNAKVPGSIQPVYGAQHPPLDPRIHRTFPKDTPKANNLKSKKASSFHEF
ARSTNDAWDIDDEEDEDFSAPIHPLSLPPTLHSTHQVQQPINTTTESETGPGLADRLAPP
TAEVRLQHEKATDCGQINGRVVVKSSSEALLNTNTVRSTLQKQQSLPVRPIIPLVARISD
QNSSGAPIMTVRDKSRLDKFKYLLSCPNTDLEELRKHSWSGIPREVRPITWRLLSGYLPA
NMERRDLVLKRKRDEYFGFIEQYYHSRTDETYKDTYRQIHIDIPRTNPLIPLFQQPTVQE
VFERILFIWAIRHPASGYVQGINDLVTPFFVVFLSEFVEEDVENFDVASLPLDTQRNIEA
DSFWCMTKLLDGIQDNYTFAQPGIQNKVKALEELVSRIDEDIHNYFKRYEVEYLQFAFRW
MNNLLMRELPLRCTIRLWDTYQAEQEGFSHFHLYVCAAFLIEWRKEILSMVDFQGLLMLL
QNLPTIHWGNEEVGLLLAEAYRLKYMFADAPNHYKR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgacaacagaatacatttctggaggaaaaacgcaaaggttccaggaagtata
cagccagtttatggagcgcagcatcctccacttgaccccagaatacaccgcacgtttcct
aaagacacgccaaaggcaaataatctcaagtccaaaaaggcgtctagtttccacgagttt
gcccgtagcaccaacgatgcctgggacattgatgatgaggaggatgaggacttctcagct
ccaatccatcccttatctctcccgcccaccctgcactccacgcaccaggtacaacaaccc
attaacaccaccactgagtcagaaacagggccggggcttgcagaccggctggctccccca
acagcagaggtccgtcttcagcatgagaaggccacagactgtggacagatcaatggcaga
gtggtggtgaagtccagcagtgaggccctgctcaacaccaatacagtgcgctcaactctg
cagaagcaacagtctctcccagttcgccccatcatcccgttagtcgccagaatctctgac
caaaattcctcgggggccccaatcatgacagtgcgagacaagagccgattggacaaattc
aaataccttctgtcctgtcctaacaccgacctcgaggagctccggaagcacagctggtca
ggcattccacgagaagtgcgacccatcacatggaggctcctctcaggttacctcccagcc
aacatggagcgcagagacctggtgctgaagaggaagagagatgagtactttggcttcatt
gaacagtattaccactccaggacagacgagacttacaaagacacatatagacagatccac
attgatattccgaggacaaacccgctaattccacttttccagcagcccacggtgcaagag
gtgtttgagcggatcctcttcatctgggctatccgccatccagccagtggctacgtccag
ggaatcaacgacttggtcactccattctttgtggtattcctttccgaatttgttgaggag
gatgtggagaattttgacgtagcgtcccttcctcttgacacccagaggaacattgaggca
gacagcttctggtgcatgaccaagctgctggatggaatacaggacaactacacctttgct
cagccagggattcagaacaaagtgaaagctttggaagaattggtcagcagaatcgatgag
gacatacacaactactttaagaggtatgaggtggagtacctgcagtttgctttccgctgg
atgaacaacctgctgatgagagaactgcctctacgctgcaccatccgcctctgggacacc
tatcaggctgagcaagagggcttctcccacttccacctgtacgtctgtgctgctttcctg
atcgagtggcgcaaagagatcctctccatggtcgattttcagggtcttctcatgttactc
cagaaccttcccacaatccactgggggaacgaggaagtaggccttctcctggctgaagca
tacagactcaagtatatgttcgctgacgcgcccaatcactacaagagatag
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