Coregonus clupeaformis (lake whitefish): 121537717
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Entry
121537717 CDS
T08357
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121537717
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
121537717
NCBI-ProteinID:
XP_041701254
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Position
24:48591232..48618238
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AA seq
821 aa
AA seq
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MGVLTYCVLLFLFQHLTSAYDFKEGQYNNGQYEFVKDPSLNIEKRSADLELEQFDSESSD
HIRSRRSADEGDCKSLQGFDTKLTNNTHTYSFNDLSGSVSLAWVGDATGVILALTTFQVP
FFMLRFGQSKLYRSENYGKSFQDVTKLINNTFIRTEFGIAIGPENSGKVILTGDVSGSLG
SRIFLSRDFGKSFEQQDLPFNPLMQIMYNPRDANVLLVISNTNELWLSEDFGENWRKIHD
MVCLVKWGMNRNIFFTSNLNGSCNDRGMLDLRRTTDYGKTIKTVATKIFSFGLGGKFLFA
SVMTGTGTLRIIHVSTNQGEEWNMAQLPPVGHEEFYSILAANEDMVFMHVDEPGDTGFGT
IYVSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFITSVLAEDGSVQSVVSFDQGG
EWVPLQKPDNTKCDSTAKDPDKCSLHIHAAYSTAMKLNVPMLPLSEPNAVGLIIAHGSVG
DAIAVMKPDVFVSDDGGYTWLQALKGPHHYAILDSGGLLVAVEHSAQPIKDIKFSTDEGQ
CWHLHQFTSDPIHFTGLASEPGARSMNVSVWGYRDSLLSQYWVSVTIDFRELLTRDCEDQ
DYVQWLAHSDDISDPNDGCMMGYKEKFLRLRKASVCWNGRDYEVNKQPSPCPCTLDDFLC
DFGYYRKENSSACVEQPDLKGHILEFCLQGKKELLQTTGYRKIPGDKCEGGTQPERKEID
LSKRCVSDLLGRQELLTDGHLSSSAPIVVTVLIILILSIVAGVLFVKKYVCGGRFLVHSY
SVLQQHAEALGDGVDEPLDSNHTQAGNKTDFHDDSDQDLLE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgggagttctaacgtactgtgttttactttttctattccagcatttgacatcagcttat
gattttaaagaaggacaatataacaatggacagtatgaatttgtgaaagatcccagtttg
aatatcgaaaagagatcagcagatttagaattagaacagtttgactctgaatcatccgac
cacataaggagcaggagaagcgcggatgaaggggactgtaaaagtctccagggattcgac
accaaattgactaacaacacccacacctactccttcaatgacctgagtgggtccgtgtca
ctggcctgggtcggagacgccactggggtcatcctggctttgacaacattccaagttcca
ttcttcatgttgagattcggccagtccaaactctaccgaagtgagaactatgggaagtcg
ttccaggacgtcacaaaactcatcaacaacactttcatcaggacagagttcggcatcgcc
atcggaccagagaactctgggaaggtgatcctgacaggtgatgtgtctggcagcctgggc
tctcgtatctttctctccagagactttgggaagagctttgagcagcaggaccttcccttc
aaccccctgatgcagatcatgtacaaccccagagacgccaacgttctcctggttatcagc
aacactaacgagctctggctgtcagaggactttggagagaactggaggaagatccatgac
atggtgtgtctggtcaaatgggggatgaacaggaacatattcttcacctccaacctcaat
ggatcctgcaatgacagggggatgctggatttgaggaggacaacggattatgggaagacc
ataaagaccgttgccactaagatcttctctttcggcctggggggaaagtttctgttcgcc
tctgttatgactggaactggcactctgaggattatccatgtgtcgactaaccagggggag
gagtggaacatggctcagctgcctccggttggccacgaggagttctattccatcctggca
gccaatgaggacatggtgttcatgcacgtggacgaaccaggagacacaggctttggcacc
atctacgtttcagatgacagggggacagtgtattctaagtctctggagcgtcacctctac
accaccacagggggcgacactgacttcaccaacgttacctctctacgaggagtcttcatc
actagtgtactggcagaggacggctcggtgcagtccgtggtgtccttcgaccagggaggg
gaatgggtgcccctgcagaagcctgacaacaccaagtgtgactccacagctaaagaccct
gacaagtgcagtctccacatccacgcagcttacagcacggctatgaagctgaacgtcccc
atgctgcctctcagtgaaccaaacgctgtaggactcatcatagctcacgggagtgtgggc
gatgccatcgctgtgatgaagcctgatgtattcgtgtccgatgacgggggctacacctgg
ctccaggccctgaagggacctcaccactatgccatcctggactctggtggactactggtg
gctgtggagcactctgctcagcccatcaaagacatcaagttttccacagacgagggccag
tgctggcaccttcaccagttcactagcgatcccatccacttcacagggctagcgtcggag
ccgggggcgaggtctatgaacgtcagtgtctggggctacagagactctctgctcagtcag
tactgggtatcagtcaccatcgacttcagagagctgctcactagagactgtgaggaccag
gactacgtgcagtggctggcgcactctgatgacatcagcgaccctaacgacggctgtatg
atgggttataaggagaagttcctgcgtctgaggaaggcctccgtctgctggaacggacgg
gactatgaggtcaacaagcaacccagcccctgcccctgcactctggatgacttcctctgt
gactttgggtactaccgtaaagagaacagctctgcgtgtgtggagcagccggacctgaag
ggccacattctggagttctgtctgcagggcaagaaggagctgctgcagaccacaggctat
aggaagatccctggggataagtgtgagggaggaacacagccggagaggaaagagatcgac
ctcagtaagaggtgtgtcagtgacctgctgggacgtcaggaactactgacggatggccat
ctgtccagctctgcacccatcgtagtgacggttctaatcattttgatactcagtatcgta
gctggggtcctcttcgtcaagaagtacgtctgcggtggaaggttcctggtgcacagctac
tctgtcctacagcagcatgctgaggccctgggagacggagtagacgagccactagacagc
aaccacactcaggctggcaacaagaccgacttccacgacgattcagaccaggatcttctg
gagtaa
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