KEGG   Coregonus clupeaformis (lake whitefish): 121537717
Entry
121537717         CDS       T08357                                 
Name
(RefSeq) sortilin
  KO
K12388  sortilin
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04142  Lysosome
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    121537717
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C BNR_6
Other DBs
NCBI-GeneID: 121537717
NCBI-ProteinID: XP_041701254
LinkDB
Position
24:48591232..48618238
AA seq 821 aa
MGVLTYCVLLFLFQHLTSAYDFKEGQYNNGQYEFVKDPSLNIEKRSADLELEQFDSESSD
HIRSRRSADEGDCKSLQGFDTKLTNNTHTYSFNDLSGSVSLAWVGDATGVILALTTFQVP
FFMLRFGQSKLYRSENYGKSFQDVTKLINNTFIRTEFGIAIGPENSGKVILTGDVSGSLG
SRIFLSRDFGKSFEQQDLPFNPLMQIMYNPRDANVLLVISNTNELWLSEDFGENWRKIHD
MVCLVKWGMNRNIFFTSNLNGSCNDRGMLDLRRTTDYGKTIKTVATKIFSFGLGGKFLFA
SVMTGTGTLRIIHVSTNQGEEWNMAQLPPVGHEEFYSILAANEDMVFMHVDEPGDTGFGT
IYVSDDRGTVYSKSLERHLYTTTGGDTDFTNVTSLRGVFITSVLAEDGSVQSVVSFDQGG
EWVPLQKPDNTKCDSTAKDPDKCSLHIHAAYSTAMKLNVPMLPLSEPNAVGLIIAHGSVG
DAIAVMKPDVFVSDDGGYTWLQALKGPHHYAILDSGGLLVAVEHSAQPIKDIKFSTDEGQ
CWHLHQFTSDPIHFTGLASEPGARSMNVSVWGYRDSLLSQYWVSVTIDFRELLTRDCEDQ
DYVQWLAHSDDISDPNDGCMMGYKEKFLRLRKASVCWNGRDYEVNKQPSPCPCTLDDFLC
DFGYYRKENSSACVEQPDLKGHILEFCLQGKKELLQTTGYRKIPGDKCEGGTQPERKEID
LSKRCVSDLLGRQELLTDGHLSSSAPIVVTVLIILILSIVAGVLFVKKYVCGGRFLVHSY
SVLQQHAEALGDGVDEPLDSNHTQAGNKTDFHDDSDQDLLE
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgggagttctaacgtactgtgttttactttttctattccagcatttgacatcagcttat
gattttaaagaaggacaatataacaatggacagtatgaatttgtgaaagatcccagtttg
aatatcgaaaagagatcagcagatttagaattagaacagtttgactctgaatcatccgac
cacataaggagcaggagaagcgcggatgaaggggactgtaaaagtctccagggattcgac
accaaattgactaacaacacccacacctactccttcaatgacctgagtgggtccgtgtca
ctggcctgggtcggagacgccactggggtcatcctggctttgacaacattccaagttcca
ttcttcatgttgagattcggccagtccaaactctaccgaagtgagaactatgggaagtcg
ttccaggacgtcacaaaactcatcaacaacactttcatcaggacagagttcggcatcgcc
atcggaccagagaactctgggaaggtgatcctgacaggtgatgtgtctggcagcctgggc
tctcgtatctttctctccagagactttgggaagagctttgagcagcaggaccttcccttc
aaccccctgatgcagatcatgtacaaccccagagacgccaacgttctcctggttatcagc
aacactaacgagctctggctgtcagaggactttggagagaactggaggaagatccatgac
atggtgtgtctggtcaaatgggggatgaacaggaacatattcttcacctccaacctcaat
ggatcctgcaatgacagggggatgctggatttgaggaggacaacggattatgggaagacc
ataaagaccgttgccactaagatcttctctttcggcctggggggaaagtttctgttcgcc
tctgttatgactggaactggcactctgaggattatccatgtgtcgactaaccagggggag
gagtggaacatggctcagctgcctccggttggccacgaggagttctattccatcctggca
gccaatgaggacatggtgttcatgcacgtggacgaaccaggagacacaggctttggcacc
atctacgtttcagatgacagggggacagtgtattctaagtctctggagcgtcacctctac
accaccacagggggcgacactgacttcaccaacgttacctctctacgaggagtcttcatc
actagtgtactggcagaggacggctcggtgcagtccgtggtgtccttcgaccagggaggg
gaatgggtgcccctgcagaagcctgacaacaccaagtgtgactccacagctaaagaccct
gacaagtgcagtctccacatccacgcagcttacagcacggctatgaagctgaacgtcccc
atgctgcctctcagtgaaccaaacgctgtaggactcatcatagctcacgggagtgtgggc
gatgccatcgctgtgatgaagcctgatgtattcgtgtccgatgacgggggctacacctgg
ctccaggccctgaagggacctcaccactatgccatcctggactctggtggactactggtg
gctgtggagcactctgctcagcccatcaaagacatcaagttttccacagacgagggccag
tgctggcaccttcaccagttcactagcgatcccatccacttcacagggctagcgtcggag
ccgggggcgaggtctatgaacgtcagtgtctggggctacagagactctctgctcagtcag
tactgggtatcagtcaccatcgacttcagagagctgctcactagagactgtgaggaccag
gactacgtgcagtggctggcgcactctgatgacatcagcgaccctaacgacggctgtatg
atgggttataaggagaagttcctgcgtctgaggaaggcctccgtctgctggaacggacgg
gactatgaggtcaacaagcaacccagcccctgcccctgcactctggatgacttcctctgt
gactttgggtactaccgtaaagagaacagctctgcgtgtgtggagcagccggacctgaag
ggccacattctggagttctgtctgcagggcaagaaggagctgctgcagaccacaggctat
aggaagatccctggggataagtgtgagggaggaacacagccggagaggaaagagatcgac
ctcagtaagaggtgtgtcagtgacctgctgggacgtcaggaactactgacggatggccat
ctgtccagctctgcacccatcgtagtgacggttctaatcattttgatactcagtatcgta
gctggggtcctcttcgtcaagaagtacgtctgcggtggaaggttcctggtgcacagctac
tctgtcctacagcagcatgctgaggccctgggagacggagtagacgagccactagacagc
aaccacactcaggctggcaacaagaccgacttccacgacgattcagaccaggatcttctg
gagtaa

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