Coregonus clupeaformis (lake whitefish): 121537743
Help
Entry
121537743 CDS
T08357
Symbol
rerea
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121537743 (rerea)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121537743 (rerea)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
GATA
ELM2
Myb_DNA-binding
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
121537743
NCBI-ProteinID:
XP_045063223
LinkDB
All DBs
Position
24:complement(47587597..47840355)
Genome browser
AA seq
1586 aa
AA seq
DB search
MTADKDKPDKEKDRDRDRDRDRERDRDRDKRDKASRESESSRPRRSCTLEGGAKNYAESE
DEDNENRGGAGGVGGVNMGMGEESGKKGKKKMIKKKSRYERMENGEITSFITEDDVVYRP
GDCVYMESRRPNTPYFICSIQDFKLSKRDHLLLSVKWYYRQSEVPDSVYQHLVQDRNNEN
DSGRELVITDPVVRGRELFISDYVDTYHAAALRGKCNIAHFSDIFAAREFKARIDSFFYI
LGYNPETRRLNSTQGEIRVGPSHQAKLPELQPFPSEAPVGLGHVTENEELVWMPGVNDCD
LLMYLRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNTLHESSYDAGKALQRLVKK
PVPKLIEKCWSEDEVKRFIKGLRQYGKNFFKIRKELLPNKETGELITFYYYWKKTPEAAS
SRAHRRHRRQPVFRRIKTRTASTPVNIPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYA
CRHCFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEDEDGL
SGKHSMKTRRNRGSMSTLRSGRKKQTASPDGRASPTNEDLRCSGRTSPSAASTDSTDSKT
DPMKKPSKKIKEESPMKSAKRQREKGGASDTEDADNRTSVKKSKTQELGRSDSPSECEGE
GESSDGRSVNEECSSDAKDIDQDNRSSSPSIPSPRDGESDSDSSAQQQLLLLQRQERERE
RVREGQGQSQHPPVIQPCQPGTSGGRSTTPPLQPTSSSAPSLVPSSSAPPTSLPLPLPPP
MPQQAGPLSLIQSGASLLPQRRPSPSPHSPQQGMSQVPPLGPPGSTQLLPSALHGPLPHP
SSMPHPLQTGPSHLPHPHSLPPQSFPLGPQSQVPPSPLPLSQSQQPSHRAHTPPSQSSSS
QGGLSNQPPREQPLPPAPSMSMPHIKPPPTTPIPHMPNRDPQSHKHGPPHLSVPPFPQMP
SNLPPPPALKPLSSLSTHHPPPAHPPPLQLMPQGPSQQLQPPSAQPPVLTQSQNLPPSER
ERGSQHHPTPPPPLPPSGPSPSSHPNTPQQPPFPPHPFAPVLPLSSAGCPPPSSSLPPVL
QPPPSSSSSISMPLPASVGSACPGPALPPVHIKEEPLDESEEPESPPPPPRSPSPEPTIV
NTPSHASQSARFYKHLDRGYNTCARTDFYFTPLAASKLAKKRAEALERAKREAEQKAREE
KEREKEREREREREKEQERAAKASSSCHDGRMGDSQMVGSAHMRPPFDGPPTSIAAVPPY
IGPDTPALRTLSEYARPHVMSPTNRNHPFFVSLNPNDPLMAYHMPGLYNADPGMRERELR
EREMREREMRERELRERMKPGFEHKPPELEGMHPSANPMEHFARHGAISLPPMAGPHPFA
SFHHGLNPLERERLALAAGPQLRPDMSYPERLAAERLHAERMAAVANDPIARLQMFNITP
HHHQHSHIHSHLHLHQQDSLHQGGGECLVCPPGSGGHPLVDPLAGGPHLARFPYPHGAIP
NPLLGQNPHEHEMLRHPVFGTPYPRDLPPQMSAAHQLQAMHAQSAEMQRLAMEQQWLHGH
HHMHGGPLPGQEDYYSRLKKESDKQL
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggacaaagacaagccagacaaggagaaggacagggacagagaccgagacagg
gacagggagcgggacagagaccgagacaagagggacaaagcgtccagggagagcgagagc
tctcgaccgcgccgcagctgcacgctggagggcggagctaagaactacgccgagagcgag
gacgaggataatgagaacaggggaggggccgggggagtaggcggggtcaacatggggatg
ggggaggagtcagggaagaagggaaagaagaagatgattaagaagaagtcgaggtatgaa
cggatggagaacggagagatcacttccttcattactgaagacgacgttgtttacagacct
ggcgattgtgtatatatggagagccgcaggcccaacactccctacttcatatgtagcatt
caggattttaaactgagtaaacgtgaccatctgttgctgagtgttaagtggtactaccgc
caatcagaggtccctgactcggtctaccaacacctggtgcaggatcgcaacaatgagaac
gattctggccgggagctggtcatcacagacccagtggtcaggggcagagaactcttcatc
tctgactatgtggacacctatcatgctgctgcgctcagggggaagtgtaacatcgcccat
ttctccgacatctttgctgccagggagttcaaagctcgcatcgactcctttttctacatc
ctgggatacaacccagagaccaggcgactaaacagcacacagggagagatcagagtgggg
cccagtcatcaagccaagcttcccgagctgcagcccttcccttccgaggccccggtgggc
ctgggtcatgtgaccgagaatgaggagctggtgtggatgccaggggtcaacgactgtgac
ctgctcatgtacctcagggctgcaaggagcatggccgccttcgctgggatgtgtgacgga
ggttctacagaagacggctgtctagcagcctctcgagatgacaccacactcaacgcactg
aacacgcttcacgagagcagttatgatgcaggcaaggccctacagcgcctggtcaagaag
cctgttcccaaactcatagagaagtgctggtcagaagacgaagtgaagcggttcattaaa
gggcttagacaatacggcaagaacttcttcaagattcggaaagagctgctacccaacaag
gaaacgggtgagttgataacattctactactactggaagaagactcctgaggcagcgtcg
tcccgagcccaccgtagacaccgccgccagcctgtgttccgacgcatcaagacgcgcacc
gcctccacccccgtcaacatcccatctagaccaccctcctcagagttcttggatctaagc
tcagccagtgaagatgacttcgacagtgaagacagtgagcaggaactgaagggatacgcc
tgccgacactgtttcaccaccacctctaaggactggcaccacggtggcagagagaacatc
ttgttgtgtacagactgtcgtatccactttaagaagtacggcgagctgccccccatcgag
aagccagtggacccgcccccgttcatgttcaaacctgtcaaagaggatgaggatggactc
agcgggaagcatagcatgaagaccagacgcaacagaggatcgatgtcgacgctccgtagt
ggccgtaagaagcagacagccagtcctgatggacgagcgtctccaaccaatgaggacctg
cggtgtagtggccgtacctccccctccgcagcctccacagacagcactgacagcaagacc
gatcccatgaagaaacccagcaagaagattaaggaggagtctcctatgaagagtgccaaa
cgccagagagagaagggaggagcctcagacacagaagacgcagacaacaggacaagcgtc
aaaaagtccaagacgcaggagctgggtcggtccgactcgccgtcggaatgcgagggcgag
ggcgagagctccgacgggcgtagcgtcaacgaggagtgtagcagtgacgctaaagacatt
gaccaggacaaccgcagctcctcgccttccatccccagcccccgagacggggagagcgac
tcggactcctccgcccagcaacagctgctcctactgcagagacaggagagggagagggag
agggtgagagagggacaggggcagtcacagcaccctccggttatccagccctgtcagcca
gggacctccggtggtcgctccaccacccctccattacaacccacgtcctcctcagctccc
tcactggtcccctcctcctccgcaccccccacttctcttccactgcctctaccgcctccc
atgccccaacaggccggccccctctctctcatccaatcaggggcgtccctcctcccccag
aggcggccctccccctcgcctcattctccacagcaggggatgtctcaggttccaccccta
ggaccgccaggctccacccagttgctaccgagcgcgctccacggcccgctaccccaccca
tcatccatgccccacccactccagactggcccctcccacctaccccaccctcactccctg
ccccctcaaagcttcccattgggcccccagtctcaggtcccgccctccccgctgcctctc
agccaatcgcagcagccgtctcacagggcccacaccccccccagccaatcatcgtcatcc
cagggtggcttgtccaatcagccgcctcgcgagcagcccctaccccccgccccttccatg
tccatgccccacatcaagccacctcccaccacccccatcccccacatgcccaaccgcgac
cctcagtcccacaaacacgggcctccacacctctcagtgccccccttcccccagatgccc
tccaacctgccccctccacctgccctcaagcccctctcctccctgtccacccaccaccct
ccccctgcccaccctcctcccctccagctcatgccccagggcccaagccagcagctccag
cctccatcggcccagccccctgtcctcacccagtcccagaatctccccccttcagagaga
gagcgaggcagccagcaccaccctactcctccgcctcctctacccccctccggaccatca
ccgtcctcccaccccaacacaccccaacagcccccgttccctcctcaccccttcgccccc
gtcctgcccctctcctccgctggctgccctcccccctcctcctctctacctccagtcctc
cagcctcctccctcttcctcctcctccatctccatgcccctcccagcctccgtcggctcc
gcctgcccaggtcccgccctcccacctgtacacatcaaggaggaacctctcgacgaatca
gaggagcccgagagccctccgccccctccgcggagcccctcccccgagcctaccatcgtc
aacacgcccagccatgccagccagtcagcacggttctacaagcacctggaccggggttac
aacacgtgtgctagaacagacttctacttcacgcctctggctgcctctaaactggccaag
aagagggcggaagcactggagcgggccaagagggaggcagaacagaaagcccgggaggag
aaggagagggagaaggaacgggagagggaacgggaaagagagaaggaacaggagagagcg
gcgaaagcctccagttcgtgtcacgacggccgtatgggcgactcccagatggttggctcc
gcccacatgcgtcctcccttcgacggcccccccacctccatcgccgcggtgcccccttac
atcggccccgacacgcccgccctgcgcaccctcagcgagtatgcccgccctcacgtcatg
tccccaaccaataggaaccaccccttcttcgtctccctcaaccccaacgaccccctgatg
gcctatcacatgcctggcctctacaacgccgacccgggcatgcgggagcgcgagctgcgg
gagcgggagatgagagagagagagatgagggagagggagctgagagagaggatgaagcct
gggttcgaacacaaacccccggagttagaaggcatgcacccctcggctaaccccatggag
cacttcgcccggcatggcgccatctccttaccccccatggcgggaccacaccccttcgcc
tccttccaccacggcctcaaccccctggagagggagcgtttggcgctggctgcgggaccc
cagctcagaccggacatgagctacccggagcggctggcggcggagaggctgcatgctgag
aggatggcggcggtggctaacgaccctatcgccaggcttcagatgttcaacatcacgcct
catcatcaccagcactcccacatccactcacacctacacctgcaccagcaggactcgctg
caccaaggtggtggtgaatgtcttgtgtgtcctcccggttcgggggggcaccccctcgta
gaccctctggcaggaggcccccacctcgcccgcttcccctacccgcacggcgcaatcccc
aaccccctcctgggacagaacccacacgaacatgagatgctgcgacaccctgtcttcggt
actccgtacccccgggacctccctccccagatgtctgcagcccaccagctccaggccatg
catgctcagtctgcagagatgcagcggctagctatggagcagcagtggctacatggacac
caccacatgcacgggggcccgctgcctggacaggaggattattacagccggctgaagaag
gaaagcgacaagcaactgtaa
DBGET
integrated database retrieval system
