Coregonus clupeaformis (lake whitefish): 121537838
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Entry
121537838 CDS
T08357
Name
(RefSeq) peroxisome proliferator-activated receptor delta-like isoform X1
KO
K04504
peroxisome proliferator-activated receptor delta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03320
PPAR signaling pathway
cclu04148
Efferocytosis
cclu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121537838
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121537838
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121537838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121537838
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121537838
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121537838
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
121537838
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
WHD_LYAR
Motif
Other DBs
NCBI-GeneID:
121537838
NCBI-ProteinID:
XP_041701373
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Position
24:complement(53237538..53252187)
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AA seq
518 aa
AA seq
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MEWLQQLPSPEHLEQVNGETRITLGANSTGTLPLCGPNSPQTLDTAADIIWTAQEVEAVG
SDFGDLLGVVEGSGAERSRSPISMVSRNGTGSQQNGGGGEEERLEKVKTSHSRQDSPAAA
TNYTDLSRTSSASLSEQLCLGRDEATGPGINVECRICGDKASGFHYGVHACEGCKGFFRR
TLRLRLEYERCERACMILTKNRNKCQYCRFQKCLALGMSHDAIRYGRMPEAEKKLMAGLL
AEELDTQHPGGLDLKTLTKQVYQAYLQNLIMTKKKARSILTGKTSCTSTFVIHDVDTLWQ
AESGLVWDQLVPGAPLTKEIGVHVFYRCQCTTVETVQELTKFAKSIPGFVDLFLNDQVTL
LKYGVHEAIFAMLPSLMNKDGLLVANGKGFVTREFLRSLRKPFSEIMEPKFEFAVKFNAL
ELDDSDLALFVAAIILCGDRPGLMNVKQVEQSQDGILQAMDQHLQENHQDSLFPKLLNKM
ADLRQLVTENTLLVQKIKKTESETSLHPLLQEIYKDMY
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggaatggttacagcagctaccttcccctgagcaccttgaacaggtgaatggggaaact
aggattacgcttggggctaacagcacaggcacactgcccctgtgtggcccaaactctcca
cagaccctggacacagcagctgatatcatatggactgcacaggaggtggaggcagtgggc
tctgactttggagacctgctgggggttgttgagggcagtggggcggagaggtcgaggtcc
cccatctcgatggtatcaaggaatgggactggcagccaacagaatggaggaggaggggaa
gaggagagactggagaaggtgaagaccagccacagcagacaagacagtccagctgctgct
accaactacacagacctgtctcgcacgtcatctgcctcactgtcagagcagctgtgtttg
ggccgggacgaggccaccggccctgggatcaacgtggagtgtaggatctgtggggacaaa
gcttcagggtttcactacggtgtgcatgcctgcgagggctgcaagggcttcttccggcgg
acccttcggttgaggctggagtatgagcgctgtgagagagcctgtatgatcctgacgaaa
aaccgtaacaagtgccaatactgtcgcttccagaagtgcctagcccttggcatgtcacat
gatgcgatccggtatgggcgtatgccggaggctgagaagaagcttatggctggcctgcta
gctgaggagctagatacccaacaccctggaggcttggacctcaagacccttactaaacag
gtgtaccaagcctacctgcagaacctcatcatgaccaagaagaaggcccgcagtatcctc
accggcaagaccagctgcacatcgacatttgtgatccatgatgtggacaccctgtggcag
gcagagagtggtttagtatgggaccagttagtcccgggtgcgcccctcaccaaggagata
ggggtacacgtgttctaccgctgtcagtgcaccacggtggagaccgtacaggagctcact
aagttcgccaagagcatcccagggtttgtggatctcttccttaacgaccaggtaacacta
ctgaagtatggcgtccacgaggccatcttcgccatgctgccctccctcatgaacaaagat
ggcctcctggtggccaacgggaagggctttgtgacccgggagttcctgaggagcctccgt
aaacccttcagtgagatcatggagcccaagtttgagtttgctgtgaagttcaatgctctg
gagctggatgacagtgacctggctctgttcgtggccgctatcatcctgtgtggagaccgt
ccagggctgatgaacgtgaagcaggtagaacagagtcaggatggtattctccaggctatg
gaccagcacctacaggaaaaccaccaggactccctcttccccaagctgctgaacaagatg
gccgacctcagacagctggtcacagagaacaccctgctggtgcagaagatcaagaagacc
gagtctgagacctctctgcacccactactacaggagatctataaggacatgtactga
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