Coregonus clupeaformis (lake whitefish): 121537862
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Entry
121537862 CDS
T08357
Symbol
cacnb3b
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-4
KO
K04864
voltage-dependent calcium channel beta-3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121537862 (cacnb3b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121537862 (cacnb3b)
04261 Adrenergic signaling in cardiomyocytes
121537862 (cacnb3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121537862 (cacnb3b)
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121537862 (cacnb3b)
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Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
NUC129
Motif
Other DBs
NCBI-GeneID:
121537862
NCBI-ProteinID:
XP_041701414
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Position
24:complement(54144882..54208277)
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AA seq
387 aa
AA seq
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MSLTNSNVFLLNEGSADSYTSRPSDSDVSLEDDPEASRLEAERQAQLQLERAKSKPVAFA
VKTNVSYCGALDADCPVQGAAINFETKDFLHIKEKYSNDWWIGRLVKEGADITFIPSPVK
LEAMRIKQEQKQAQRKAGNSSSGWRSTPPTAAKQKQKQTEHLPPYDVVPSMRPVVLVGPS
LKGYEVTDMMQKALFDFLKHRFDGRISITRVTADLSLAKRSVLNKKAIMERSNTRSSLAE
VQSEIERIFELAKTLQLVVLDADTINHPAQLLKTSLAPIIVYVKVSSPKVLQRLIKSRGK
SQSKHLNVQLMAGDKLAQCPPEMFDVILDENQLEDACEHLAEYLDIYWRATHLPCSAPLN
PLLDQSVVTPPSANSSQQFSETQELIE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgaccaattcaaacgtctttctgctgaacgagggttcagctgattcctacact
agtagaccctcagattccgacgtgtccctggaggacgacccagaggcgtctcggcttgaa
gccgagcgccaggcccaactgcagttggagagagccaagtcgaaaccggtagcatttgca
gtgaagaccaacgtgagttactgtggggctctagatgcagactgtcctgtccaaggtgct
gctatcaactttgaaaccaaagattttctacacataaaagagaaatacagcaatgactgg
tggatcggtcggctggtgaaggaaggggcagacataaccttcatccccagcccggtgaaa
ctggaggccatgcggatcaaacaggaacagaaacaggcccagaggaaagcagggaactca
tcgtccggctggagatccacaccacctactgcagccaagcagaagcaaaagcagacagaa
catctcccaccctatgatgttgttccttcaatgagaccagtggtgttggtggggccctca
ctgaaaggctatgaggtaacagacatgatgcagaaggccctgtttgacttcctgaaacac
aggtttgatggaagaatctctatcacgcgggtgactgctgatctgtctttggccaaaagg
tctgtattgaacaagaaggccatcatggagaggtctaacacacgctccagtcttgctgag
gtccagagtgagattgagaggatctttgagctggctaagaccctacagctcgtagttctg
gacgcagacaccatcaaccacccagcacagctcctcaaaacgtccctggctcctatcatc
gtttacgttaaggtgtcctctcctaaggttcttcagaggctcatcaaatctcgggggaaa
tctcaaagtaaacacctcaatgtacagttgatggcgggagacaaactagcacagtgtcca
cccgagatgtttgatgtgatcctggatgagaaccagctggaggatgcatgtgaacacctg
gcagagtacctggacatctactggcgcgccactcacctgccctgctccgcccccctcaac
cccctattggaccagagcgtggtcaccccgccctcagctaactccagccaacagttctcc
gagactcaagagttaatagaatga
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