Coregonus clupeaformis (lake whitefish): 121537876
Help
Entry
121537876 CDS
T08357
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04514
Cell adhesion molecule (CAM) interaction
cclu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121537876 (l1cama)
04517 IgSF CAM signaling
121537876 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121537876 (l1cama)
04090 CD molecules [BR:
cclu04090
]
121537876 (l1cama)
04091 Lectins [BR:
cclu04091
]
121537876 (l1cama)
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
L1 family
121537876 (l1cama)
CD molecules [BR:
cclu04090
]
Proteins
121537876 (l1cama)
Lectins [BR:
cclu04091
]
I-type lectins (Siglecs)
121537876 (l1cama)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
Pur_ac_phosph_N
Bravo_FIGEY
Ig_5
SMIM36
Motif
Other DBs
NCBI-GeneID:
121537876
NCBI-ProteinID:
XP_041701437
LinkDB
All DBs
Position
24:54928077..55055693
Genome browser
AA seq
1283 aa
AA seq
DB search
MPHTQRQQVGSRGRCTPLLHHPILLLPLFSLLLSHAPQLSQGAIHIPSKYQINEFKKPPV
ITTQPVSITVFGAEDILLICEASGNPPPNFRWTKDGEAFIPANDPGLSVSPGSGTFMSTG
VVSGPMSQYEGKYSCYADNALGTAVSNEVQLITENTPALQKEQKVKKNVEEGESVVLKCN
PPFSIVPPVIHWMDKRMNHIELNDRVTQGRDGNLYFSHVTADDTRIDYTCNVQYLSARTI
LSKEPIILNVTTSNSVVRSRRPQMMRPSGTHSTYHALRGQSLDLECIVQGLPTPTIQWVR
KDGQLSESRTSIDLSDHLLRFSNISESDGGEYQCSANNSQGRVTHTYTVSVEAAPYWTKE
PVSQLYAPGETVRLDCQADGIPSPAVAWSINGIPITGIDPDPRRTVKDGALILRDVVFTD
TAVYQCQAHNKHGTILVNTYIFVIELPPQILSADGETYTVTEGQKAVLHCQTFGSPRPKV
TWERNSSTSLLAEPRVNLLTNGNLQITNVSHGDEGLYTCSVSNTNLSINTDLDVLNRTVI
LSPPGSLRVQPGKTAILTCLAQVDPKLTPPQIQWRRSKQKLFQSYDEDKYTFEGPDLIVA
NVQTEDEGVYTCEVITNLDMAEASGSIMVVDRPDPPTQLQVSGPKDRNVTLSWTAGDDHN
SPVIEFVVEFDDIGSKERGWEELKRVSGTKESVTLALQPYVSYRFQVISINNIGKSDPST
PSDLYSTPPQAPDNNPEHVRSESTDPDTLVITWEEMDRRVFNGPEFHYKVFWRRVVGDGP
TWHSNVSTEPPYIVTEVGKFSSFEIKVQAVNQKGEGPEPDPVIGSSGEDVPLEAPMNVGV
MLLNSSAIRVTWEAVDQETVRGHLLGYKIHLTRFGSRGHHRGRRAREPETSVVVETGPNE
ENRVLGGLRPYSHYAFTVTVFNSKGEGPPSETMSFETDEGAPGPPMSLLLDSPADTEMTL
HWTPPAQPNGVLKGYLLQYQQIVKSDDSPMQVETIDDHKVTHLTLKQLDPHSRYRFYLRG
RTSAGDGEPIIREGATTLDGAPPSNISLSVGEKSVNLSWVPGQRHRSVGFQVQYLNKQGG
GKWKQSEKLNSSASFYQLKGLTPGSQYRLRFTFSNNAFWETEIRTKGAGVMDVQTGFATQ
GWFIGLVTAIVLLLLVLLILCFIKRRKGGKYSVKDKEEGQVDSEARPMKDETFGEYSLWT
RSLESDNEEKRTASQPSLCDESKLDGYNNGSIAVTEVNMEDSLVSQYSRPSETTPDPGTL
QESSPLNPTPTTNGLPNSAAILD
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacactcagcgacagcaggttggcagtagggggcgatgcacccctctcctccac
caccctatcctcctcctccctctcttctctctcctcctatcccacgccccccagctcagc
caaggagccatacacataccttctaaataccaaataaatgaatttaagaagcccccagtg
atcaccacccagccagtgtccatcactgtgttcggtgctgaagacatcctcctgatctgc
gaagcatcagggaaccctcctcccaatttccgctggactaaagatggggaagcatttatt
ccagccaatgacccgggcctgtcggtgtctccgggttctggaaccttcatgtcaactggg
gtggtgtcaggccccatgagccaatacgagggcaaatacagctgctacgctgataacgca
ttaggaactgctgtgtctaacgaggtccagctcatcactgagaacaccccggccctgcag
aaagagcagaaggtgaagaagaatgtggaggaaggagagagtgtggtactgaaatgtaac
cctcccttcagcattgttcctcctgtcatccactggatggacaagcgaatgaatcacata
gagctgaatgatcgtgtaacccagggccgggacgggaacctctacttctctcacgtcacc
gccgacgacacccgtattgactacacctgtaacgtccagtacctcagcgctcgcaccatc
ctctccaaggaacccatcatcctgaacgttacaacctctaactcagtggtgcggagccga
aggccccagatgatgaggccctcagggacccacagcacttaccacgccctccggggccag
agcttggacctagagtgcatcgtccagggcctccctacccctacaatccagtgggtgagg
aaggacggtcagctgtccgagtcacgtacgtccatagatctgtctgaccacctgctgcgc
ttcagtaacatctcagagagcgatgggggagagtaccagtgttcagccaacaactcacag
ggcagggtcacacacacatacaccgtcagcgtcgaagcggcaccgtactggaccaaggag
ccagtaagccagctctatgccccaggagagacagtgagactggactgtcaggctgacggc
atcccgtctcctgctgtcgcctggagcatcaatgggatacccatcacaggcatagaccca
gaccccaggcgtactgtgaaagatggagctctgattctgagagatgtggtcttcactgat
acagcagtctaccagtgtcaggcccacaacaaacacggaaccatcctagtcaatacctac
atcttcgtaatcgagctgcctcctcagatcctgagtgccgacggagagacgtacaccgtt
acagagggacagaaggctgtactgcactgtcagaccttcggctctcccagacctaaggtt
acatgggagaggaacagcagcacttctctactggctgagcccagggttaacctgctgacc
aatggaaacctccagatcaccaatgtctcccacggcgacgagggcctgtacacctgctcc
gttagcaacaccaacctgtcaatcaacactgacctggatgtgctgaacaggacagtgatc
ctgtctcctcctgggtctctgcgtgttcagcctggtaagacggccatcttgacctgcctg
gctcaggtggaccccaaactcacccctccacagattcagtggaggaggagcaaacagaaa
ctctttcagtcatacgacgaggacaagtacacgtttgagggcccagacctgattgtggcc
aacgtgcagacagaggacgagggtgtttacacctgtgaggtcatcaccaacctggacatg
gctgaggccagcggatccatcatggtagtcgaccgtccggacccccccacccagctccag
gtctctggccctaaggaccgcaatgtcaccctgagttggaccgcaggagatgaccacaac
agccctgtcatagagtttgtggtggagtttgatgatattggctctaaggagcggggttgg
gaggagctgaagagagtcagtggaactaaagagagcgtgacccttgccctgcaaccctac
gtgtcctaccgcttccaggtcatctccatcaacaacatcgggaagagtgaccccagcacg
ccctctgacctttacagcaccccacctcaagctccagacaacaacccagagcatgtgagg
agtgagtctacagacccagacaccctagtcatcacatgggaggagatggacaggcgtgtg
ttcaacggcccagagttccactacaaggtgttctggaggagggtggttggtgacggcccc
acctggcactctaatgtctccactgagccaccgtacatcgtcactgaagtgggcaaattc
tcctcctttgaaatcaaagttcaggctgtcaatcagaaaggagagggacctgagccagac
cctgtgattggttcctctggagaggacgtccccctggaggctcctatgaatgtgggtgtg
atgctgctcaacagttcagccatcagggtaacgtgggaagcagtggaccaagagactgtc
agaggacacctgcttggatataagatccacctgacgaggtttggctccaggggccaccac
cgaggccgcagggccagagagccagagaccagtgtggtggtggagacagggcccaacgag
gagaacagggtcctggggggcctcagaccctactctcactacgccttcaccgtcactgtg
ttcaacagcaagggagaggggcccccctccgagaccatgtccttcgaaaccgacgaggga
gctcctggcccccccatgtccttactcctggacagccctgcagacacggagatgaccctg
cactggacacctcctgcccaacccaacggggttctcaaaggatacctgctgcagtaccaa
cagatcgtgaagagtgatgacagcccgatgcaggtggagaccatagacgaccacaaggtc
actcacctgaccctgaagcagctggacccccacagccgctaccgcttctacctgaggggg
cgcacctcagccggggacggagagcctatcatcagggagggcgccaccacactggacgga
gctcctccgtccaacatcagcttgtctgtaggagagaagtctgttaacctgagctgggtg
ccaggacagagacacaggagtgtgggcttccaggtccaatacctcaataagcaaggcggt
gggaagtggaagcagtctgagaagctgaactcgtctgcatcgttctaccagctgaaaggt
ctaaccccagggtcacagtaccgcctcagattcaccttcagcaacaatgccttctgggag
acggagatcaggacaaagggagcaggggtgatggatgtgcagacaggctttgctactcag
ggctggttcattgggctcgtgaccgccatcgtgctgttgctgctggtactgctaattctc
tgcttcatcaagaggcgcaaagggggaaagtattcagtcaaagataaggaggagggtcag
gtagactctgaggcacgccctatgaaggatgaaacattcggagagtacagtctttggaca
agatctctagaaagtgacaatgaggagaagcggacagccagccagccgtctctgtgtgat
gagagcaagctggatggctataacaacggtagcattgctgtaaccgaggtgaacatggaa
gactccctggtcagccagtacagccggcccagcgaaaccaccccggacccgggcacactg
caggaaagctcccccctcaatcccacccccaccaccaacggcctgcccaactcggccgcc
attttagattag
DBGET
integrated database retrieval system
