Coregonus clupeaformis (lake whitefish): 121537911
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Entry
121537911 CDS
T08357
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121537911
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121537911
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121537911
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
121537911
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121537911
NCBI-ProteinID:
XP_041701494
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Position
24:17747973..17867520
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AA seq
513 aa
AA seq
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MATNRERQVGHMTGLPPAVYPFAFNSTRNHSPFDLLANSSLFGRFSTDLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEGERPVRNDRNKKKKDVKEELVLPESYE
LSGEMEELVNKVSKAHKDTFPSLLQLGKYHTNSSSDHRVQLDLGLWDKFSELSTKCIIKI
VEFAKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHN
AGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAISLISGDRMDLEEPQKVDKLQEPLLEAL
KIYARRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEA
FEDQTESSGESSPPPVPPASTKPPTTMKTEAEDEEDCWGTENGSEPSPEEEDEDDYDDGE
EEDRDRGSDSEGESWTLEGSSEGARKNHAGRAQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacagggagcggcaggtgggtcacatgacggggctcccaccggctgtctac
ccatttgccttcaactctacacggaaccactccccctttgaccttctggccaatagcagc
ctgtttgggaggttcagcacggacctccctaaagagatggctgcactctcggtggagacc
cagagcaccagctctgaggagatggtccccagctctccctctccacctcccccaccacgt
gtctacaaaccctgcttcgtgtgccaggacaagtcctctggataccattacggagtcagc
tcatgtgagggctgcaagggtttcttccggcgcagtatccagaagaacatggtgtacacc
tgccaccgagacaagaactgccagatcaacaaggtgaccagaaaccgctgccagtactgc
cgactgcagaagtgcttcgaggtcggcatgtccaaggaaggtgagagaccggtgcgtaac
gacaggaacaagaagaagaaagacgtcaaggaggagttggtgttgccggagagttatgag
ctgagtggagaaatggaggagctggtcaacaaagtcagcaaagcccacaaagacaccttc
ccctcactgctgcagctgggcaaataccacactaactccagttcagaccaccgcgtgcag
ctggacctggggctgtgggataagttcagtgagctctccaccaagtgcatcatcaagatc
gtggagtttgccaagcgcctcccaggcttcaccaccctcaccatcgctgaccagatcacc
ctcctcaaatcagcctgcctggacatcctgatgttgaggatctgcacgcgctacacccca
gagcaggacaccatgaccttctcagacgggctcaccctgaaccggacccagatgcacaac
gcaggcttcggcccgctcacagacctggtgtttgcctttgctggccagctgctgcctctg
gagatggacgacacagaaacgggcctcctcagcgccatctccctcatctctggagaccgt
atggacctggaagagccccagaaggtggacaagctgcaggagcccctcctggaggccctg
aagatctacgcccgtcgcagacgccccaacaagccccacatgttcccccgcatgctgatg
aagatcactgacctcagaggcatcagcaccaagggggcagagagagccatcactctgaag
atggagatcccaggccccatgcctcctctgatcagggagatgttagagaacccagaggct
ttcgaggaccagacagagagcagtggagagagctccccaccgcccgttccaccagcttcc
accaagccccccaccacaatgaagactgaggccgaggacgaggaggactgctgggggaca
gagaacggcagcgagccttccccagaggaggaagatgaggatgactatgatgatggggag
gaggaggatcgggacaggggctcggacagtgagggggaatcctggactctggagggtagc
agcgaaggggctaggaagaaccatgccgggagggcgcagtga
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