Coregonus clupeaformis (lake whitefish): 121537934
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Entry
121537934 CDS
T08357
Name
(RefSeq) zinc finger and BTB domain-containing protein 39-like
KO
K10511
zinc finger and BTB domain-containing protein 39
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121537934
04121 Ubiquitin system [BR:
cclu04121
]
121537934
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121537934
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121537934
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2_4
zf-C2H2
zf-H2C2_2
zf-met
zf-C2H2_ZNF462_1st
zf-C2H2_jaz
zf-C2H2_14
Herpes_DNAp_acc
Motif
Other DBs
NCBI-GeneID:
121537934
NCBI-ProteinID:
XP_041701538
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Position
24:complement(18453980..18458419)
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AA seq
855 aa
AA seq
DB search
MRIRLQGSGHAAGLLAELNHCRLSRLFCDVILQVGSRSFAAHRAVLACAGTHFRSLFSGR
GTQIGTAGATTTYSLDFVSQANFEKVLTFIYTGEIFTDLIDLGVLYELAERLGVRELVRA
CHATFPDLQQPGSADCVADGDLDPDMAAAAGSSVCSSSAASCSSLSSSAGPSAAPTPAAA
PSPLPQGSRVARLGRGGGHTAPLSLSLSLKAEDVQSHLGYGQMAEDKRLQLTGDQQSSVD
MSTVAVGATPGPPLPLQLKTEEVVVGDGVGNGEEEQMVVSGSRAGSVPPFVSDSCSFPDS
SAQLGGDICGVREAPSSSSGDPLDSLQMGVGGVSSGHAGVAGVIFGGEEDEDEDNEEERE
HLQGDEEGTDGGGDQWRQLAGEIIELSDGENYMEEEDEEEEDEDEDLVCVENGAAVSGGG
VNTGQVSSVQGMVACKACGMALLADSASLRAHAETHLSETGACRVCGASFPGDRGASITH
ALSHVVFSCDMCHLQFNSPAKLVRHRRQAAARYTLPSQLHNATQGHSGELQCAVCNKVLT
KDFQVIRDHLLSHVSIQSLSCGVCQLPQPSLCALLWHALTHLSLPVYSCPLCACSFLDRP
LLDRHMFLHAEEAATDREAMRAHKAAGPEGEEELRCFLCPQTFRSASAFQYHLSFHTNEA
QGSQGWAGKRKADQMEYPSSCSSSSPLEAGSLGKLGNMGFGLGSFSLSDKLLQGAVAAGF
PAGLLSNGNSSSVGGSAMGAAIPREKWYRCRFCGKRFAHSGEFTYHLRIHTGEKPYQCKV
CLRFFRGRSTMICHLKTHAGALMYRCTVCGLYFSTLKLVSSHMDVHKDHLPPDFNIEQTF
MYNDHSKEPLPALDT
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaggattcggctgcagggctcaggccacgccgctggcctcctcgctgagctcaaccac
tgccgtctctcccgtctcttctgtgatgtcatcctccaggtggggagccgctccttcgca
gcgcaccgcgcagtgctcgcctgcgccgggacccacttccgcagcctgttctcgggcagg
gggacccagatcggaaccgccggagccacgacaacgtactctctggactttgtgtcccag
gccaactttgagaaggtgctgactttcatctacactggagagatattcacagacctgata
gatttaggagtgctgtatgagctggcagagaggctgggggtgagagagctggtgagggcc
tgtcacgccaccttccctgacctgcagcagccgggctctgcagattgtgtggcggatgga
gacctggaccctgacatggctgctgctgctgggtcatcagtgtgctcgtcctctgcagcg
tcttgttcctccctgtcatcatctgctggtccctcggctgctcctactccagcggcggcc
ccctcacctctcccccagggcagcagggtggccaggctgggccggggtggtggacacaca
gcccctctgtccctgtctttgtcccttaaagcagaggacgtccagtctcacctgggctat
ggacagatggccgaagacaaacggctacagctgactggagatcagcagagttcagtagac
atgtccactgtagctgtgggggccacacctggacctccccttccactgcagctgaagact
gaggaggtggtggtgggagatggggttggtaacggtgaggaggaacagatggtagttagt
gggagtagagctggttctgtacctccatttgtgtctgactcctgctccttccccgactcg
tcagcccagctgggaggggatatctgtggggtgagggaggccccctcgtcctcttctgga
gaccccctggacagcctgcagatgggagtgggaggggtgagctctggccacgcaggtgtg
gcaggggtcatcttcgggggggaggaggatgaagatgaagataatgaggaagagagagag
catctgcagggagatgaagaagggactgatggaggaggggaccagtggagacagctggct
ggagagatcatcgagttgagcgatggcgagaactacatggaggaggaagacgaggaggag
gaggatgaagacgaggacttggtgtgtgtggagaacggagcagcggtcagcggaggggga
gtgaacactggccaggtgtcgtcggtgcagggtatggtggcatgtaaagcctgtgggatg
gcactgttagcagactctgcttccctgagggcccacgcagaaacccacctctctgagaca
ggggcctgcagggtgtgtggggcatctttccctggagaccgtggggcaagcatcacccac
gccctgtcccatgtagtgttctcttgtgacatgtgtcatctccagttcaacagcccagcc
aagctggtacgccaccggcgccaagctgcagccaggtacaccctccccagtcagctccac
aacgccacccaggggcacagcggggagttgcagtgtgctgtctgtaacaaagtcctcacc
aaagacttccaggtcatcagggatcacctgctgagtcacgtgtctatccagtcactgagc
tgtggtgtgtgccagctgccccagccctccctgtgtgccctgctgtggcacgccctcacc
cacctctccctgccagtctactcctgcccgctctgcgcctgcagcttcctagatcgccct
ctgttggacagacacatgttcctgcatgccgaggaggccgccaccgacagagaggccatg
agggctcataaagcagccggaccagagggagaggaggagctgcgctgcttcttatgccca
cagaccttccgctccgcctcagccttccagtaccacctgagctttcacaccaatgaggcc
cagggcagccaggggtgggcagggaaacgaaaggctgaccagatggagtacccttcctcc
tgctcctcctcctcccccctggaggcaggcagcctggggaagctgggcaatatgggcttc
ggcctgggctccttcagcctctcagacaagctgctccagggggccgtggcggctggcttc
cccgcaggcctcctgtccaatgggaactcctctagcgtgggtgggtcggccatgggtgcc
gccatcccccgggagaaatggtaccgctgtcgcttctgtggcaaacgcttcgcccactct
ggcgagttcacctaccacctgcgcatccacactggggagaagccgtaccagtgcaaggtg
tgcctgaggttcttccgagggcgctccaccatgatctgccacctgaagacccacgccggg
gcgctcatgtaccgctgcaccgtctgcggcctctacttttccacgctcaagctggtgtcc
tcccacatggacgtccacaaagaccacctgcctccagacttcaacatagagcagaccttc
atgtacaatgatcactccaaagaaccccttcccgccctggacacctga
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