Coregonus clupeaformis (lake whitefish): 121537985
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Entry
121537985 CDS
T08357
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121537985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121537985
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121537985
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121537985
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121537985
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121537985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank_2
Ank
Ank_4
Ank_3
Ank_5
BAR
Trypan_PARP
PH_11
TPR_TTI1_N
PH_21
Motif
Other DBs
NCBI-GeneID:
121537985
NCBI-ProteinID:
XP_041701620
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All DBs
Position
24:14175454..14275564
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AA seq
848 aa
AA seq
DB search
MTVDFEECVKDSPRFRANIDEVETEVVEIEAKLDKLVKLCSGMIEAGKAYVSANKLFVNG
IRDLSQQCKKDEMISECLEKCGESLQEIVNYHMILFDQAQRSVKQQLHNFVKEDVRKFKE
TKKHFDRMREDMEIAQVKNAQAPRNKPHEVEEATGTLSITRKCFRHLALDYVLQINVLQA
KKKFEILDAMLSFMHAQYSLFQQGYNLLDEIDPYMKKLAAELDQLVIDSAMEKRDMEHKH
AIIQQRTLMQDFSYDDSKAELFNVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLV
YQKKLKDSLTVVVEDLRLCSVKPCEDIERRFCFEVVSPNKSCMLQAESEKLRLAWIQAVQ
ASIASAYRESPDYHYIECLDRTASPSVSSIDSASEPRERSVRGETILHRIQCLSGNEYCC
DCGQADPRWASINLGILLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNSVI
NHIYEGACEAQGLKKPGPSSSRQEKEAWIKSKYVEKKFLKKLGATEVLVNGGRKSERRWS
VKKWRRHNSATTVPKTRRKYRQEPGSASPATLSSVASALERKFRRESLFCPDELDNLFSY
FDTGSGPRSPAGLSSDSGLGGSTDGSTDILVFGSVVDSVTEEECEVSEDSSGEAEMEPEP
ETQSDPEDGRELHPGALLYKASMARNLPIMAEALAHGADVNSVNDEDDGKSPLIQAVIGG
SLIACEFLLQNAADVNQSDARGRGPLHHATYLGHTGQVCLFLKRGATQNDGDEDGQDPLS
IAVQAANADIVTLLRLARMNEEMRESEGPFGQPGDSTYLDIFREFSHMASHNPEKLKRRS
VHFRHSFR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggactttgaagaatgtgtgaaagattcaccccggttcagggcaaacattgat
gaagtggagacggaggtggtagagattgaagctaaactagataagctggtgaagctatgc
agtgggatgatcgaagcagggaaggcgtatgtcagcgccaacaaactctttgtgaacggg
atccgggacctgtcccaacaatgcaagaaggatgagatgatctcggagtgcctggaaaag
tgtggggagagcctccaggaaatagtcaactaccacatgattctgttcgatcaagcccag
agatctgtgaagcagcagctgcacaactttgtgaaagaggatgtccgtaaattcaaggag
accaagaagcactttgaccgcatgcgtgaggacatggagatagcccaggtgaagaacgcc
caggctcccaggaacaaaccccatgaggtggaagaggccaccggaacactcagtatcacc
aggaagtgcttcagacacctggccctcgactacgtacttcagatcaacgtccttcaagca
aagaagaagtttgagatcctagatgctatgctgtccttcatgcacgcccagtactccctc
tttcagcagggctacaatctgctggatgagattgacccctacatgaagaagctggctgct
gagttggatcagttggtgattgattcggccatggagaagagggatatggaacacaagcac
gccattatacagcagaggaccctcatgcaggacttctcgtatgacgactcgaaagcagag
ttgttcaacgtagacgcgcccaatggcgtggtgatggaggggtacctgtttaagagggcc
agcaacgcctttaagacgtggaacaggcggtggttctccatccagaacagtcagctggtc
tatcagaagaagctgaaggattccctgacggtggtggtggaggacctcaggctgtgctct
gtcaagccttgtgaggacattgagaggaggttctgcttcgaggttgtctcccccaacaag
agctgtatgctgcaggcggagtcagagaagcttcggctagcctggatccaagcagtgcag
gccagcattgcctcagcatacagggagagcccagactaccactacattgagtgtctggac
aggacagcctcaccttccgtcagcagtatcgactcggccagcgagcctcgggaacgcagt
gtcagaggggagaccatcctgcaccgtatacagtgtctctcgggcaacgagtattgctgt
gattgtggccaggccgacccacgctgggcctccatcaacctgggcatcctactctgcatc
gagtgctccggcatccacaggagtttgggggttcactgctccaaggtgcgctctctaacg
ttggactcatgggaacctgagttactaaagctgatgtgcgagctgggaaacagtgtcatc
aaccacatctatgaaggagcatgtgaggcgcagggcctgaagaaaccagggccctcaagt
tccaggcaggagaaggaggcatggatcaaatcaaagtatgtggagaagaagttcctgaag
aagttgggggccacagaggtgcttgtgaacggcgggcggaagtcggagcgccggtggagt
gtgaagaagtggcggagacacaacagcgccaccacagtgcccaagacccgacggaaatac
cgtcaggagccgggcagcgcctcccctgccaccctctcctcagtcgcttcagctctagag
agaaagttccgacgagagtcactgttttgtccagacgagctggacaatctcttctcttac
ttcgacacaggatctgggcctcgtagccctgcaggtctgagcagtgacagtggcctgggc
ggcagtacagacggcagcacagacatcctggtgttcggctcagtggtggacagtgtcaca
gaggaggagtgtgaggtgtcggaggactctagcggagaggctgagatggagcctgagcct
gagacccagtcggacccagaggatgggcgtgagctccaccctggggcgctgctctacaag
gcttccatggcacgcaacctgcccatcatggctgaggcgctggcccacggggctgacgtc
aactccgtcaacgacgaggatgatggcaagagcccactcatacaggcagtgattgggggc
tctttgatagcctgtgagttcctgctccagaatgcagctgacgtcaaccaaagtgacgca
agggggagggggccactacaccacgccacatatctgggacacacagggcaggtgtgtttg
ttcctgaagagaggagccacgcagaacgacggggacgaggatggccaggaccctctgagt
atcgctgtgcaggcagccaacgcagacatcgtcaccttgttgcgtctggccaggatgaac
gaggagatgcgggagtcggagggaccgttcggccagccaggagactctacttaccttgac
atctttcgagagttttctcacatggcctcccacaacccagagaagctgaagcggaggagt
gtacatttcagacactccttcaggtag
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