Coregonus clupeaformis (lake whitefish): 121538053
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Entry
121538053 CDS
T08357
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 1
KO
K05696
tyrosine-protein phosphatase non-receptor type 1 [EC:
3.1.3.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04520
Adherens junction
cclu04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121538053
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
121538053
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121538053
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121538053
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Non-receptor PTPs
121538053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
PTP-SAK
Tc-R-P
DSPc
CDKN3
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
121538053
NCBI-ProteinID:
XP_041701733
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All DBs
Position
24:11013700..11027536
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AA seq
446 aa
AA seq
DB search
MEAEFRGIDEPGSWNAIYQEIRQQSSELPCKLAKLPENKTRNRYRDVSPFDHSRIRLQLG
TNDYINASLISVEEAQRSYILTQGPLPNTCGHFWEMVWEQRTMGVVMLNRVIEKGSVKCA
QYWPPREAREAVFEDTHFKLTLVSEDIKSYYTVRQLELENLSTLETREILHFHYTTWPDF
GVPESPASFLNFLFKVRESGCLNSDQGPVVVHCSAGIGRSGTFCLVDTCLLLMSMRKDPS
SVHIRDVLLEMRRYRMGLIQTADQLRFSYLAVIEGARCIMGDASLQESWKELSNEEDVPP
EFTPPPPRPRPPGPSVNGTVEPISFFPEIVVAQNDSHTRSAPSETALRWRGGSEGATAQS
PSPTVSADQPDGQAGSKEPAPKASTKPHRLYETETQQGLNQDQAAEQAAGDVSPEALGAW
TPLLANVCLCTALALGAYVCYRACFH
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgagtttcggggaatcgatgaacccgggagttggaacgccatttaccaggaa
atccgtcagcaatcaagtgagctgccctgcaaacttgctaaattacctgaaaacaaaact
cggaatcgctacagagatgtcagcccatttgaccacagcagaatccgcctgcaactgggt
acgaacgactacattaacgcaagcctgatttctgtagaagaggcacagagaagctacatt
cttactcaggggccccttccaaacacatgtggtcacttctgggagatggtgtgggagcag
aggacaatgggagtggtgatgctgaaccgtgtcatagagaaaggatctgtgaagtgtgcc
cagtactggccgcctagagaggcgagggaggcggtctttgaagacacacatttcaagcta
acacttgtttcagaagacatcaaatcctactacactgtccgtcagctggagctagaaaat
ctgtcgactctggaaactagagagatcctacattttcactacaccacctggcctgacttt
ggggtgcccgagtctccagcttccttccttaacttcctgttcaaggtgcgggagtctggg
tgcctcaactctgaccaggggcctgtggtggtgcactgcagcgcaggcatcggacgatca
ggaaccttctgtctcgttgacacctgcctcttactgatgtccatgcgcaaggacccgtcg
tctgtgcacattcgtgacgtgctgctggagatgcgacgctatcggatgggcctgattcaa
acagctgaccaactcagattttcctacctcgctgttattgaaggtgccaggtgcatcatg
ggagatgcatcattgcaggagtcgtggaaagagctctccaacgaagaggacgttcctcca
gagttcacccctcccccgccccgtccccgtcctccaggtccatctgtcaacggcacggtt
gaacccatctcattctttcctgagattgttgttgcacagaatgattcccacactcgcagt
gccccatcagagactgcactgcgatggaggggaggtagtgaaggcgctaccgcccagtct
ccgtctcccactgtatccgctgatcaacctgatggccaggcgggaagcaaagaaccagct
cccaaagcttctacgaaaccccaccggctgtatgagacagaaacacaacaggggttgaac
caggaccaggcagcagagcaggcagcgggagacgttagccctgaggctctgggggcctgg
acccccctgctggccaatgtatgcctctgcacggccctggccctgggtgcttatgtctgt
taccgggcctgtttccactga
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