KEGG   Coregonus clupeaformis (lake whitefish): 121538056
Entry
121538056         CDS       T08357                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 5B-B-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121538056
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cclu03036]
    121538056
Enzymes [BR:cclu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     121538056
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121538056
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    121538056
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN Phage_RpbA PHD_2 PHD-1st_NSD
Other DBs
NCBI-GeneID: 121538056
NCBI-ProteinID: XP_041701739
LinkDB
Position
24:complement(10968268..10993428)
AA seq 1528 aa
MTQPRPDEFKPPPECPVFEPSWEEFADPFAFINKIRPIAEKTGICKVRPPPGWQPPFACN
VDRLHFTPRIQRLNELEAQTRVKLNFLDKIAKFWELQGCSLKIPHVERKILDLYQLNKNV
ADEGGFDIVCRDRRWTAIALKMGFAPGKAVGSHLRSHYERILYPYNLFQSGANLLAPELA
SKLMCLVSAPELDTFVQKPTLPVDTSDKEYKPHDLAERQQFVQPAESCCNSARRAKRMRV
ESGCVKTEPGTEPCENRPNLRRRMGSFVAKPEPEKEIPILVKQEPIGPVSEADENKSRYK
KKPSLDVPPPAVDLYMCLVCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPK
CLAQECSKPQEAFGFEQAYRDYSLRAFGEMADSFKSDYFNMPVHMVPTELVEKEFWRLVS
TIEEDVTVEYGADIASKEFGSGFPIRNGRFKVSEKDEKYLKCGWNLNNMAMMDPSVLTHV
TADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQLEAVMK
KLAPELFQIQPDLLHQLVTIMNPNTLMSHGVPIYRTNQCAGEFVITFPRAYHSGFNQGFN
FAEAVNFCTVDWMALGRQCVDHYRLLHRYCVFSHDEMICQMASKANSLDVVLASAVQKDM
KDMIREEQDLRNKVRKMGVLHCQQAEYNLLQDDERQCAKCRTTCYLSAITCPCSPGQLVC
LHHIQNLCSCPLTNYTLNYRFTLDELYPMMNAVKQRAEFYDEWASHVTETLEAKLDKKKS
LSVFRSLINKSESKMFPDNDLLRQLRLVTQDAEKCSSVAQQLLNGKRQTRYRCGGGKTQS
QLTVEELRSFVRQLYNLPCSLPQAPKLKELLNCIEDFQQHSEKLLADETTGTAEIQSLLD
ISFDFDVELPELPLLRERLAQARWLEGVQQASTQRSTLTLETMRRLIDQGVGLTPHRSVE
KAMARLQELLTVSEHWEDKTSSLLKARPPLSIEALSETAEKVAGIPAYLPNCLMLKVSIS
RAREWLQEAEALQDEDSIPLFYNLSDMVLRGQDIPVQLGPLKQLESLVAEVQAWKESAAK
TFLMKNSHFTLLEVLCPRCEVGAGSPKRKSKKAKDITQHSKKKMVKLDCLSDVEKALSET
KDSASALATLGEVRLREMGALSSLRAANESKLLPTADCMDLKVCVCQNPPMGAMLQCELC
RDAFHSVCVRAPSDSRSAQAWLCPHCRRSEKPPXDKVLPLLASLQRIQVRLPEGDALHYL
VERTVSWQQRARQVSSSCGLPDLEESFATPPSPNGKPTCLSPEWNRTTHDQMVFYTEQRC
IPLQDLSVELEELMVEGLLLQVSLPEITQLYHVLLNGLRTHHTNGRTSPQDDDLSDCDKL
KQCNSQGRSSPQKEDGLKKEVVNGAEKAKRRLEREAVEPERRDKAKKFRDKAKKFQNKRQ
KMNKEKSLERKAASTSSSPRSDFSQSDDSEEEMCPAEGCQQPEGDEVDWVQCDGSCNQWF
HQVCVGVTAELAEKDDYVCDKCTISDGR
NT seq 4587 nt   +upstreamnt  +downstreamnt
atgacccagcctcggccggacgagttcaagccgcctccggagtgcccagtcttcgaacca
agctgggaggaatttgccgatccttttgcttttataaataagatccgtccaattgcggaa
aaaacgggtatttgcaaagtccgcccgcctccgggctggcagcccccatttgcatgtaat
gttgacagactgcacttcactcctcggatacagaggctcaatgaactagaggcacagacc
agagtcaagcttaacttcttggacaagatcgcaaagttctgggagttgcaggggtgttct
ctgaaaattcctcacgtggaaaggaagatattggacctgtatcaactcaacaagaatgtt
gcagatgagggcggatttgatattgtgtgtcgcgacagacggtggacggcgattgcactt
aagatgggctttgctcctggcaaggctgtgggctctcacctacggtcacactatgagaga
atcctctacccctacaacctcttccagagtggagccaacctcctggcaccagagcttgct
tccaagctgatgtgtttagtgtctgcccctgaacttgacacgtttgtccagaagccaacc
ctgccagttgacacgagtgacaaggagtacaaaccccatgacctggccgagaggcagcag
tttgtccagccagccgagtcctgctgcaacagcgcccgcagagcaaagcggatgagagtt
gagtccggttgtgtgaagactgaaccaggaactgaaccctgtgagaacagaccaaatctg
aggaggaggatgggctcctttgttgccaagcccgagccagaaaaagaaattcccattcta
gtgaaacaagaacccatcgggccagtgagcgaggcagacgaaaacaagtctcgatataag
aaaaaacccagtcttgatgtcccacctcctgcagtggacctgtatatgtgtctggtgtgt
ggcagcgggagtgacgaggatcgtcttctgctgtgtgatggctgtgacgacagttaccac
accttctgtctcataccccctctacacgacgtccccaaaggagattggaggtgccccaag
tgcctggctcaagaatgcagcaaacctcaggaggcatttggctttgagcaggcatacagg
gactactctttgcgggcttttggtgaaatggcagactccttcaaatctgattacttcaac
atgccagttcatatggttcccacagagttggtggaaaaagagttctggcgcttggtgagc
accatcgaggaggacgtcacagtggagtacggagcagatatagcttccaaggagtttggg
agcggattccccatcagaaatggaagatttaaggtttcagaaaaggatgagaagtacctg
aagtgtggctggaacctgaacaacatggcgatgatggacccgtcagtgttgactcatgtc
acagcagacatctgtggaatgactctaccatggctctatgtaggcatgtgcttttcctcc
ttctgctggcacatcgaggaccactggagctactccatcaactacctgcactggggggag
ccgaagacatggtatggagcacctggctttgctgcagaacagcttgaggcggtgatgaag
aagctggccccagagctgtttcagattcagcctgacctcctccaccagctggtcaccatc
atgaaccccaacaccctcatgtctcacggggtccctatttacagaacaaatcagtgtgcc
ggtgagttcgtcatcaccttccccagagcttatcacagtggtttcaaccaaggcttcaac
ttcgctgaggctgtcaacttctgcactgtggactggatggcattaggccgacagtgcgtt
gaccactacagactgctgcatcggtactgtgttttctcccacgacgagatgatctgccag
atggcctccaaggccaacagtctggacgtggtcctggcgtcggctgtccagaaggatatg
aaggatatgatcagagaggagcaggacctacgaaataaagtccgcaagatgggggtgttg
cattgccagcaggcggaatacaatctcctgcaggacgacgagcggcagtgtgccaagtgt
aggaccacttgttacctgtctgccatcacctgcccctgcagccctggtcagctggtctgt
ctccaccacatccaaaacctctgctcctgccccctcaccaactacacactgaattataga
tttacactggatgagctgtaccccatgatgaacgcggtgaagcagcgagctgagttctat
gacgagtgggcctcccacgtgacagagactttggaggctaaactggacaagaaaaaaagc
ttgtcagtcttccgctccctcatcaataaatcagagtcgaagatgttccctgacaacgac
ctcctgcgtcagcttcgtttagtcacacaggacgcagagaaatgctcctcagttgcccag
cagctactcaacggcaaaaggcagaccaggtatcgctgtggtggggggaagacacagagc
cagctgactgtggaggagctgaggtcatttgtcaggcaactgtacaacctcccctgcagc
ctcccccaagcccccaaattaaaggagctcttgaattgcattgaagacttccagcaacac
agtgagaagctcctggcagacgagaccaccggcacagcagagatccagagtcttctagac
attagctttgactttgacgtggagctccctgaacttccattactacgggagagactggcg
caagcccgctggctagagggggtgcagcaggccagcacccagcgctccaccctgaccctg
gagaccatgcggaggctgatagaccagggcgtgggtctgacccctcaccgctctgtggag
aaggccatggctcgcctgcaggaattgctcacggtgtctgaacactgggaggacaagacc
agcagcctcctcaaggccaggccccccctctctatagaagctctctctgaaaccgctgag
aaggtggcggggatccctgcttacctccccaactgtctgatgctgaaggtctccatcagt
agggccagagagtggcttcaggaagctgaggcacttcaggatgaagattccattccattg
ttttacaacctctctgatatggttcttcgaggacaagacatcccagtccagcttggccct
ctaaagcagctggagtcactggtggcagaggtgcaggcctggaaagagtctgcagctaaa
actttcctcatgaaaaactctcacttcactctgcttgaggttctgtgtccaagatgtgaa
gttggagcaggttctccgaaaaggaagtccaaaaaagctaaagacatcactcagcacagc
aagaagaagatggtgaagctagactgtctcagtgatgtggaaaaagccctctcagagacc
aaggactctgcctctgctctggcaacacttggggaggtgaggttacgggagatgggggcc
ctctcctccctccgggcagctaacgagtccaagctcctccccacggcagactgcatggac
ctgaaggtgtgtgtgtgtcagaatccccccatgggagccatgttacagtgtgagctctgc
cgggacgccttccacagcgtgtgtgtgagggctccctcagactcccgttcagcccaggcc
tggctgtgcccgcactgccgacgctcggagaagccccccntggacaaggtcctgcccttg
ctggcttcgctgcagcgtatccaggtgcgtctgccggaaggcgatgcgcttcactatttg
gttgagagaacagtcagctggcaacagcgtgcgcgacaggtctcttcctcctgtggtcta
ccagacctggaggagagctttgcaactccaccatctccgaatggaaagccaacatgttta
tctccagagtggaacaggacaactcatgatcagatggtcttctacaccgagcaaagatgc
attcctctgcaggatcttagtgtggagctggaggagctgatggtggaagggctcctgctg
caggtgtctcttccagagatcacacagctctaccatgtgttactgaacgggctgagaacg
catcacaccaacggacgcacgtcaccgcaagatgacgacctctcagactgtgacaaactc
aagcagtgcaactctcagggaagaagctctccacaaaaggaggatgggctgaaaaaggaa
gtagtgaacggagcagagaaggccaagcgacgcctggagagagaggctgtagagccagag
cgcagggacaaggccaagaagttccgggacaaggccaagaagttccagaacaagagacag
aaaatgaacaaagagaagagcctggaacgcaaggcggcatcgacctcctcgtctcctcgc
tccgacttctcccagtcagacgactctgaagaggagatgtgtccagcagagggatgccag
caacctgaaggagatgaggtggactgggtccagtgtgatggcagctgtaaccagtggttc
caccaggtctgtgtgggtgtgacagccgagctggctgagaaagacgactatgtgtgtgac
aaatgtacaataagcgatggccgctga

DBGET integrated database retrieval system