Coregonus clupeaformis (lake whitefish): 121538115
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Entry
121538115 CDS
T08357
Name
(RefSeq) methyl-CpG-binding domain protein 5
KO
K26585
methyl-CpG-binding domain protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121538115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121538115
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
121538115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Motif
Other DBs
NCBI-GeneID:
121538115
NCBI-ProteinID:
XP_041701831
LinkDB
All DBs
Position
24:40607162..40624310
Genome browser
AA seq
1552 aa
AA seq
DB search
MMGGSESGSGETDGVQTVAIQIPIGWQRRVEDGLVVYVSPSGTVLSSLEEVKSYLLNDGT
CKCGLECPLVIHKVFNFSLGVKVQQHSQPVGKAEQDMTKLCNHRRKVVAMAALCRSMQAS
QLPYVSRHTEVTSGVMENRDPKRMRVDREEEERGTYPSKHHLVQSRPNNNLHHNPCGSPQ
NSTQLVFSYNGSSPLSHANANSHRSPEILRRLPPPLHFPPTTSQLSSHGAPQRSPCTPAP
QNLSHGQRTPQTPEAPRSPHLGPLSPPPPSSPGTLGRGGQSHPHGNIVGSLLSPSCSPSP
SVSMNCPSPRQRSRHPSASSSLSEQGVGGVVLGGYPPRRISSSSPHSPLPGGSPNLHFPK
YKLEDILEQFRNSGNSSTNNHILYPNSMSNQSNPQILSLALEKGEKPTKAPASATGSGMG
ISAGPSGLPLGQFLNHQKQPHPASFPASSLLSAAAKAQLASQMSYNHSSNSASVLSSALS
LEVSKESQQSKVTNSTLHNSHPSIARPLPAASLLLPHPCAPLSQPLASSPLHLSPTDRMS
HRKRQRRSPTVLSMLKDSQMSGLRTPGDVLNLSALHSQPSSTSASPHSAMSENHLQALRV
SVRHSSPLTGPQKQPDGAMDFTTIMAGQPDPPTQPLSALLHLLSVQNAQAAGAQPSSGHG
TGGMRQSPRQSPSPSHLNIRPFPMQSPSHPSTMQGPSQPLSPSQSLSRRGSASAQSPSQP
HTKASPKQRRSPSTALSNAQSAHHRSSPSPTPHTPDRLRQAQNQPMDATTTTIQSPMCQA
LPEVSASVEMGSMSTLGPGLSLGHPPNSTPTSNHSTTVTSCSTTSPRPLDLSNHVLALLA
ASSTMPLEEGGLDTTTGNNTAGVQEPQSVHHGSTVTKPPGGCSPGPSPCSTPSLGDSSGS
LPLAEAFPFMNQEQLLQLLSATAGLPSLLDPTILDSLPLGLWLGGQQGHLPTSNTPQQHH
QLPDQQQQSEHQQLLLQHEQHQEQQQKQQQTAHLNHNFPFSLLPSIMGGQGELPLNLLGL
LNPLLPPSTTLTPGQEGDLGIGEKLGLQALLMASLLLGQQQAAMLPLSGLGQLSLDLPLQ
QQHIPALLEGLSLDKGSGLLDLSSLPGPGLLEALQGMLPPAEGPLQALQSLLLPTPLPPP
GFLSLSPALLTAALGSTDLPPTPQLPPPQQPPPQVSASGPDGGVDTLIPLSVQGKDNPIL
HQLLPTLLNPGLLGDLSALTSLHSLLGLGAGPLLLPPVQTSALGMPLLQGPDVAINLLNN
IQLNMAPPSEGEKPISLQEKDSSAPQEDIPANRLAPEAAPSPCPVRAPVSQRGEGSVGSV
LDPYASFMDTIYTSFLQVSANEQEAAKSGADALCALPPSYPGEPPAPSAPLPQASAPLSL
SPRQACSLRNPELSRLNMEAAHSPAQGTPKPSDDGSATPLQNKPGVPEGHTNPPLPPIYL
EEAKTESYSQAVSDRQGDRPQAGGYLSPRDGGSCPKEETVGLQHTEQGRNQTTQTVGARR
GRKRKQTLQNVLEDFRDLDAPALEEPKPTVVLLKPERSVRGRRRRGARSQRQ
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaggcagtgagagtggcagtggagagacggatggagtccaaactgtggcaata
caaatccccattggctggcagaggagagtggaggacgggcttgtggtgtatgtcagtcca
agtggcacagtcctgtcttcactggaggaggttaagtcatatctgttgaacgatggcaca
tgcaagtgtggcctggagtgtccgctggtcatccacaaggtgtttaactttagcctaggg
gtcaaagttcagcagcacagccagccggtggggaaggcagagcaggacatgacaaagctc
tgtaaccatcgaaggaaagtggttgccatggcagctctctgtcgcagtatgcaggcttca
cagctgccctatgtttcccgtcacacagaggtcaccagtggcgttatggagaacagagat
ccaaagaggatgagagtggacagggaagaagaagaacgtggcacttatccatctaaacac
catcttgtccagtccaggcccaacaataacctccaccacaacccttgtggcagtcctcaa
aattccacccaacttgtgttttcttacaatggttcctcacccctctcacacgctaacgct
aactctcatcgctctcctgagattctgaggagactgccccctcctctccatttccctccc
accacctctcaactctccagccacggggcacctcagaggtccccatgcacccccgcgcct
cagaacctcagtcatggtcagaggacaccccagactccggaagcccccagatctcctcat
ttggggcccctctctccccctcctccctcctcccctgggacactgggaaggggagggcag
agtcatccacatggtaacatcgttgggtctctcctgtccccctcatgttccccctctccc
tctgtgagtatgaactgcccctctccccgccagcgctcacgccacccctccgcctcttcc
tctctctctgaacagggggtgggaggggtggtgctgggcggctacccccccagaaggata
tcctcttcttccccacactctcctctacccggggggtcccctaacctccatttccccaaa
tacaagctcgaggacatcttagagcagtttaggaactcaggcaacagtagcactaataac
cacatcctttacccaaactcaatgagcaaccaaagcaatcctcagatcctctctctagct
cttgaaaagggtgagaagcctacaaaggcacctgcttccgccaccggctcaggcatgggg
atcagtgctggtccttctgggttgcctcttggacagttcttgaaccaccagaagcaacca
cacccagcttcgtttcctgccagtagcctcctctcggcagcagccaaggcccagctggct
agccagatgtcctacaaccacagctccaattcggccagcgtcctcagctcggccctctct
ctggaggtctcgaaagagtctcagcagtcgaaggtaacaaacagcactttacacaacagc
catccctccattgctaggcccctccctgcagcctccctcctgcttccccacccctgcgcc
cccctctcccagcccctagcctcgagtcccctgcacctctcccctacagaccggatgtcc
cacaggaagcggcagcggcgttcgcccacggtgctcagcatgctgaaggactcccagatg
agtggtctcagaacccccggtgatgtgctcaacctctccgccttgcactctcaaccctcc
tctacctcagcctcgccccactctgccatgtcggagaaccacctccaggccctaagggtc
tcagtccggcactccagcccgctcacaggaccccagaagcagcctgacggtgccatggac
ttcactacaatcatggcaggtcaaccggatcccccgacccagcctctctctgctctgctt
cacctgctcagtgtgcagaacgctcaagccgctggagcccagcccagctctggacatggt
acaggaggcatgagacagagccccaggcagtctccctctccctcccatttaaacatcaga
ccattccccatgcagtccccctctcatcccagtaccatgcaaggcccgtcacagcccctc
tctccctctcagtcattgtccaggcgtggtagtgctagtgcacagtctccctctcaacca
catacgaaggccagtcccaaacagagacggtctccctccacggccctgtccaacgctcag
tcagcacaccatcgcagtagcccctcgcccaccccacacacccctgataggctacggcag
gcccaaaaccaacctatggatgccaccaccaccaccatccagtctcccatgtgccaggcc
ttgcctgaagtcagtgcatcagtggagatggggagcatgtcaacactaggccctggtctc
agcctgggtcatcctcccaacagcacccccacctccaaccatagcaccacggtcaccagc
tgcagcaccacctcccccagacccctggatcttagtaaccacgtgctggccctgctggca
gcctcctccaccatgcctctggaggaagggggcctggacacaaccaccggcaacaacact
gcaggggtgcaagagcctcagagtgttcatcatggctccacagtgaccaaacccccagga
ggttgcagccccggccccagcccctgcagcaccccttccctgggggactcctctggctcc
ttacccctggccgaagccttccccttcatgaaccaggagcagctcctccagcttctgtct
gccacagctggcctgccctccctcctggaccctaccatcctggactctctgcccctgggc
ctgtggctgggcggtcagcagggtcacctccccacctccaacaccccacagcaacaccat
caactgcctgatcaacaacaacaatcggaacatcaacaactactgctacagcatgaacaa
caccaagagcaacaacagaaacaacaacagactgcccatctgaaccacaactttccgttt
agcttactcccctcaataatgggaggtcagggagagctgcctctgaatctcctgggtctg
ttgaacccactgctacccccctctaccacccttaccccaggccaggagggtgatctgggg
ataggggagaagctgggcctccaggctctccttatggcctccctgctactaggccaacag
caggctgccatgttgcccctgtctgggctgggccagctgagcctggacctccccctgcag
cagcagcacatcccagccctgttggagggtttgtctctggataaaggctctggactcctg
gacctgtcgtccctgcccggccctgggcttcttgaggccctccagggcatgctgccccca
gccgaggggcccctccaggccctgcagtcgctcctgctccccactcccctgcctccccca
ggcttcctctccctcagccccgctctgctaaccgctgccctgggctctactgacctcccg
cccacccctcagctccccccaccccaacaacccccacctcaggtctcagcttcaggccct
gatgggggggtggacaccctcatccccctgtctgtccagggaaaggacaaccctatcctc
caccagttactgcccactctcctcaacccagggctactaggagacctgtctgctctgacc
agcctccacagtctgctggggctaggtgcaggccctctcctcctgccccccgtacagacc
tctgccctgggcatgcctctactccagggccctgatgtggccatcaacctcctcaacaac
atccagctcaacatggcaccgccctcagagggagaaaagccaatctccttacaggaaaaa
gacagctccgcccctcaggaggatattccagccaatcggcttgccccagaggctgcgccc
agcccctgtcccgtccgtgcccccgtatcccagcgtggtgagggctccgtggggagcgtc
ctggacccgtatgcctccttcatggacaccatctacacctctttcctccaggtcagtgct
aacgagcaggaagcagctaagtctggggcggatgccctctgtgccttacccccctcctac
cctggggagccccctgccccctccgcccccctccctcaggccagcgcccccctgtccctg
agccctcgccaggcctgctccctaaggaacccagaactgtcccggctcaacatggaggcg
gcccactccccagctcagggcacccccaaacccagtgacgacggctcggccacgcccctg
cagaacaagccaggggtcccagagggtcacactaacccccctctgcctcccatctacctt
gaagaagccaagaccgagtcgtacagccaggctgtgtcagataggcagggggacagaccc
caggcaggggggtacctgagccccagagacgggggcagctgccccaaggaggagactgtg
ggtctgcagcacacggagcagggcaggaaccaaactacacaaacggtgggagccaggagg
ggcaggaagaggaaacaaacgctacagaatgtgctggaggatttcagagatctggatgct
ccagccctagaggaacctaaacccacggtggtgctgctgaagcctgagaggtcagtccgg
ggcaggaggcggcggggggccaggtcccagagacagtga
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integrated database retrieval system
