Coregonus clupeaformis (lake whitefish): 121538117
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Entry
121538117 CDS
T08357
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 2
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121538117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121538117
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121538117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IQ_SEC7_PH
Sec7
SOS1_NGEF_PH
PH_19
RHG20_PH
PH
Motif
Other DBs
NCBI-GeneID:
121538117
NCBI-ProteinID:
XP_045062726
LinkDB
All DBs
Position
24:complement(4777004..5008537)
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AA seq
1648 aa
AA seq
DB search
MEASQGHGQGSPESPNRAVAYLLELNNIIESQQKLLETQRHRIDELEVQLDRLAQENKDL
RLDRQRPLPPTPPCPPPPPANKTSHAAIPSVPVRPVQTQSYNSTRTNTTAIMAPAPPPPV
PVWDQHTPQTPKTPHRTPHRTPQTPKQIPVTTQTPRTPQTPKRTPHTRLTRTISTGTGTS
FVEMEKERLDRMEEERTERLRSSTLGNPTSHPHGHRQSDGPPNKESVEETPCGDTGSFSD
ITCSQGPYLGSSSDHRYSSGPGPPGPRSHHHPQGPPVAPPSPASLAWAQRTRHQPASLAL
RKQEVEDNKRCKALSDSYELSTDLQDKKVEMLERKYGGYFLSRRAARTIQTAFRQYRMNK
NFERLRSSASESRMTRRIILSNMRLQYSFDQRQGQGQPGDEEMEAGSPSQCQGDREEYTH
LDETFSKQVKSLADSIDDVLTCQSAVEDSQEEEEGDGGETGVVADDFGECVWRPREGDRQ
RGGGRGGGGGGGERQSMHEDSTATSYSDVTLYIDDGLPSSPLFLDRVPSSTDTEYWSPGV
GGVGVGGREDSRETEGGGSSNSRRSTPCTECRDHSLRGSHLPLLTIDPPSDSSVDMSDRS
DRGSIGRLVYETEPGGGGGGGGGGEGGPKARLVLCSLTAPTPRPSPPTCHTTPSYTTTIR
SPITLYTTTPSTPTTPSTPHHPYPDTPSSSSQSPQGQPLTPLSSSSSATLPPGGLEQVCC
SDGDNDSLNSTTNSNDTINCSSGSSSRDSLREPLPPLGKQTYQRESRHSWDSPAFNNDVV
QRRQYRIGLNLFNKKPEKGIQYLIERGFVSDTPVGIARFILERKGLSRQMIGEFLGCRQK
QFNKDVLDCVVDELDFSRMDLDDALRKFQAQIKVQGEAQKVERLVEAFSQRYCVCNPVLI
RQFQNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDNGQDIPRDLLVGI
YHRIEKWELRTNDDHVSQVQAVERVVVGKKPVLSLPHRRLVCCCQLYEVPDPNRSQRTGV
HQREVFLFNDMLMVTKIFQKKKTSVTYSFRQSFPLVEMQVHMFQNQYYPHGIRLTSANPG
GERKVLIVLNAPSQQDRTRFTSDLRESITEVQEMEKYRVESELEKQKGVMRPVVGGADGD
GPGGGLKGEAVNGTLGRPCLDDSYASADGLKRTALSSSLRDLSDTGKRGRRNSVGSLDST
MEGSIISSPRLHQRPHMAGGVMPPGCYDIQDYRPHRPILSPGTGVGGGPGLNHHTATGTT
ALGPSSGDRGGTGAPGSGSGGGGGSGGSFLGSLFGSKRSSTKPPGPLTPLLPPGLPHYPA
PVPPPTTGGPPPHSPSSLTHSDPGGPSKIQALHAQYCHNSIAGQQPPPPYHHHHCYHAQT
GPAPSQPSSTAQGAPGPHTIHRGPMVGVPKRPGPGPAPSHPQLQQLSQVQQHGVQGHGGR
YTNMGVSMGVGCPTPPLSPHPPHSPHPPHPPHSPVPAPLTLYHTYSTHGRGSGGGAKLPL
TLSHSQPHPHAHAHAPHHTALTHNHSPHPGLSHSPHPAQHSQHQTHFVFAAPPPQTPVAR
HITQAAAHGQYHPQYPPLSSIPPPPSHSPLPPPSSPNTPLSPYSHPLQQQPGQPPQLQGS
GGGSGSSTGTGSTSSSKSKPINRISTVV
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggaggctagtcagggccatggccagggcagcccagagagccctaaccgggccgtggcg
tacctcctggagctcaacaacatcatagagagccagcagaagctcctggagacccagagg
caccgtatcgatgagctggaggtccagttagaccgactggcccaggagaataaagaccta
cgcctggaccgccagcgacctttacccccaacgccaccctgccccccgccaccacccgcc
aataaaacaagccacgcagccataccctccgtaccagtccgcccggttcagacccagtcc
tataatagtaccagaaccaacactacagccataatggcccccgcacccccgcccccggta
cctgtatgggatcaacacacccctcaaacccccaagaccccccaccgtacaccccaccgc
acaccccaaacccccaaacaaatccccgtcaccacccagaccccgcgcactccgcagacc
ccgaaacggacgccccacacgcggctgacgcggaccatctcgaccgggacggggaccagc
ttcgtggagatggagaaggagagactggacaggatggaggaagagaggacagagagactt
cgcagctccaccttggggaaccccaccagccacccacacggccacagacagtcagatgga
ccgcccaacaaagaaagtgtggaagagactccatgtggcgacacgggcagtttctccgac
atcacctgtagccaggggccctacctgggcagctcctctgatcaccgctacagcagtggc
cctggcccaccgggcccccgatcccaccatcacccccagggacccccggtggctcccccc
agtcctgcctcactggcctgggcccagaggacccggcaccagcctgccagcctggcgctg
cggaagcaggaggtggaggacaacaagcgctgcaaagccctgtccgacagctatgagctc
tccacagatctacaggacaagaaggtggagatgctggagaggaagtatggcggttacttc
ctgagtcggcgggcggcgcgcaccatccagacggcattccgtcagtaccgcatgaacaag
aactttgagcggctgagaagctctgcctctgagagccgaatgactcgccgtatcatcctg
tctaacatgagactgcagtactcgtttgaccaacggcagggccagggccagcctggtgat
gaagagatggaggctgggtctccttcacagtgccagggggacagagaggagtacacacac
ctggacgagacattctccaaacaggtgaagtccctggctgactccatcgatgacgtcctg
acctgtcagtctgctgtagaagactctcaggaggaggaggaaggtgacggaggcgagaca
ggggtggtggcagacgactttggagagtgtgtttggagaccgagggagggagacagacag
aggggcggaggaagaggaggaggaggaggaggaggagagagacagagcatgcacgaggac
agcacagccacctcctacagcgacgtgaccctctacattgatgacgggctcccctcctca
cccctgttcctggaccgcgtccccagcagcaccgacacagagtactggagccctggagtg
ggtggcgttggggtggggggccgcgaggacagccgggaaacagagggagggggcagcagt
aacagccgacgtagcaccccctgtacagagtgtagagaccacagcctgagaggatctcac
ctgcccctgctgaccatcgatccacctagcgacagctctgttgatatgagtgaccgctcg
gatagaggttcgataggtagactggtctacgaaacagagccagggggaggtgggggaggg
ggaggaggaggggaaggggggcccaaggccagactcgtactgtgctccctcaccgccccc
acccctcggccctcccctcccacctgccacaccacaccatcttacaccaccaccatcaga
tcccccattaccctctacaccaccacccccagcacccccaccacccccagcaccccccac
cacccgtaccccgacactccctcttcgtcctcccagtcgccgcagggacaacccctcacc
cccctgtcttcctcctcatccgccacactgccccctggtggcctggagcaggtctgctgt
tctgacggagacaacgactctctcaactccaccaccaactctaacgataccatcaactgc
tcctccgggtcctcgtcacgcgacagcctccgggagcccctcccaccgctcgggaaacag
acgtatcagagagagagcaggcacagctgggatagccccgcctttaacaacgacgtggtc
cagagacgacagtaccgcatcggactcaacctgttcaacaagaagccagagaagggtatc
cagtacctgatagagagaggcttcgtatcggacaccccagtaggcatcgcccgcttcatc
ctggagaggaaaggactgagcagacagatgataggggagttcctgggctgcaggcagaaa
cagttcaacaaggacgtactggattgtgtggtagatgagttggacttctcaaggatggat
ctggatgatgccctcaggaagttccaggcccagattaaagtgcagggggaggcccagaag
gtggagcgactggtagaggctttcagtcagcggtactgcgtgtgtaacccggtgctgatc
cgacagttccagaaccccgacaccatcttcatcctggccttcgccatcatcctcctcaac
acagacatgtactctcccaacgtcaagccagagaggaagatgaagctggaggacttcatc
aaaaacctcagaggagtggataatggtcaggacattcccagagacctgttagtagggatc
taccatcggatagagaaatgggagctacgcaccaacgatgaccatgtgtctcaagtacag
gctgtggagagggtggtagtcggcaagaagcctgtgctttcgctgccccaccgcaggttg
gtgtgttgctgtcagctgtacgaggtgcctgaccctaacagaagccagaggactggagtc
caccagagagaagtcttcctcttcaacgacatgcttatggtaaccaagatcttccagaag
aagaagacgtctgtaacatatagttttagacagtccttcccgctggtcgagatgcaggtc
cacatgttccagaaccagtactatccccacggtattcgtctgacgtcggccaatcctggc
ggggagaggaaggttctgattgtattaaacgctccaagtcagcaggacagaacacgcttc
acctccgacctgagagagagcatcactgaggtgcaggagatggagaaatacagggtggaa
tcggagttggagaagcagaaaggggtgatgagacctgttgtgggcggggctgacggtgat
ggtccgggtggtggcttgaagggcgaggcggtgaatggtactctgggtcgaccctgtctg
gatgacagctatgcttccgcagacggactcaaacgtaccgcgctcagctcatcactgaga
gacctatcagacacagggaagcggggccgccggaacagtgttggctctttggacagtacc
atggaaggctccatcattagcagtccccggcttcaccagcgcccccacatggctggaggt
gtaatgccacccggctgctatgacatccaagactaccggcctcaccgccccatcctgagc
cccggaacgggggtggggggtgggccggggctaaatcatcacaccgctactgggacgacg
gcactgggtcccagcagcggagaccgaggggggacgggagccccggggagcgggtctgga
gggggagggggcagtggaggatccttcctgggttccctgttcgggagcaagcgctccagc
accaagccccctggtcctctcacccctctcctcccacctgggctgccacactaccctgca
cctgtccccccgcccaccaccggcggcccgcccccacactccccctcctccctcacccac
tccgacccaggagggccctccaagatccaggccctgcacgcgcagtactgccacaacagt
atcgcagggcagcagcctcctccaccctaccaccaccaccattgctaccacgcccagaca
gggcccgctcccagccagccctcctccaccgcccagggggctcctgggcctcataccatc
cacaggggccccatggtgggggtccccaagcggccgggccccggtcccgctccctcccac
ccccagctccagcagctctcccaggtgcagcagcatggtgtacagggtcacggggggcgc
tataccaacatgggggtttctatgggggtaggctgccccactccacccctttcaccacat
ccccctcactcccctcacccacctcacccccctcactccccggtgcccgcaccccttacc
ctctaccacacatactccacacacggtcggggaagtggaggaggcgccaagctccctctt
actctctcacactcacagccccaccctcacgcccacgcccacgcccctcatcataccgct
cttacccacaaccacagcccccaccccggcctgtcccacagcccccatcccgctcaacac
tcccagcaccagactcacttcgtcttcgctgccccgccgccccagacccccgtcgcccgg
cacatcacccaggccgccgcccacggccaataccaccctcagtaccccccgctctcctcc
ataccccctcccccttcacattcccctttaccccccccttcctcccccaatacccctctc
tccccctactcccaccccctccagcagcagcccggtcagccgccccagctccaggggtct
ggcgggggcagcggcagcagcacgggcacggggagcaccagcagctccaagtccaagcct
atcaaccgcatcagcacggtggtgtga
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integrated database retrieval system
