Coregonus clupeaformis (lake whitefish): 121538127
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Entry
121538127 CDS
T08357
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121538127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121538127
03036 Chromosome and associated proteins [BR:
cclu03036
]
121538127
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
121538127
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121538127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
121538127
NCBI-ProteinID:
XP_041701848
LinkDB
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Position
24:complement(40319348..40332776)
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AA seq
817 aa
AA seq
DB search
MSAKVELDVSAKKADPTPLTDSSDSLSNDSLSNKTRPQTTTALILPAPAPSTQKVEVSLG
VAEAGNGAIAGEVETPTLAPQVGGTCSIVHVLEWKEGMAILPSSNLKFCVSDCGTLEIIS
QGNISSAEPVVVSGKIPDSENRPINKTDVLCPLSSVGGVAVDQERPITTEPKTQGGPGQQ
ESCDPMAQRTYPEQLRREPMTDKRVGGAEKIPGGRVASLDPELLKPMKKRKRKDYLSPSE
EESELDGMDYLKTESGHNRAGTGEVKMELWTWGQYLEEVKAVAGPAKLFQESQRVPQCKS
SFRQGMKLEGIDPQHPSMYFVLTVAEVCGYRLRLHFDGYSDCHDFWVNANCPDIHPAGWC
ESTGHKLYTPKGCKEEEFSWASYLRMSKAQVAPKEVFSSPGRTDTECGFEVGMKLEAVDR
MNPSLICVATVTDVVDDRFLVHFDNWDDTYDYWCDASSPYIHPIGWCQERSLPLTPPQGY
PDPGRFSWPRYLDETGSTAVSSEAFKVRPAHGFQAQMKLEAVDRRSPGLIRVATVEEVDT
HRIKVHFDGWSHMYDDWMDSDHPDIHPVGWCESTGHPLKVPPRPREPATTGQSSFSSMPC
KGISHSRSTKYSFHHRKCPTPGCDGSGHVTGRFTAHHCLSGCPLAERNQGRLKTDLSDAE
GSRAKRSILVFGQRTKKSRYHGRIGRPPKYRKIQQRTYQTMATEGMCPSLFMSALSAHPD
RTLSLCWEQHCKLLPGVQGIHATQVAAWTVEEVFGFVQNLTGCEEQACVFKEEMIDGEAF
LLLTQTDIVKIMSIKLGPALKISNAILMFKSTDEGLK
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaaagtggagctggatgtttcagccaaaaaagcagatcccactcccctcact
gactccagtgattccctctccaatgacagtctgtcaaataagacacgcccacagaccacc
acagcactcatcctgccagcccctgctcccagtacccagaaggtggaggtctctctgggt
gttgctgaggcaggtaatggagccatagctggagaggtggagacccccactctagccccc
caggttggggggacctgtagcatcgtccatgtgctggagtggaaagaagggatggccatc
ttacccagcagcaacctaaagttctgtgtgagtgactgtggaacactggagattatcagc
caagggaatatcagcagcgctgaaccagtagtggtgtctggaaaaatacctgactccgaa
aacaggccaattaacaaaacagatgtgttgtgtcctctcagctctgtgggtggtgtggct
gtggaccaggagaggcccatcacgactgagcctaagacccagggagggccaggccaacag
gagagctgtgatcccatggcacagagaacctacccagagcaactacgcagggaacccatg
actgacaagagggtgggaggtgcagagaagattcctgggggcagggtagcgtccctggac
cctgagctgctgaaacccatgaagaagaggaagaggaaggactacctgagtccatcggag
gaagagtctgaactggatggcatggattatttgaagacagaaagcggacacaacagagcg
ggtactggtgaagttaagatggagctgtggacttggggacagtatctggaggaggtcaaa
gcagtggcaggtccagccaaactctttcaagagtctcagagggtcccgcagtgcaaaagc
agcttccgccagggcatgaagttagaaggcatcgacccccagcacccctccatgtacttt
gttctgactgtggctgaggtttgtggctacaggctgcggctccattttgacggctactca
gactgtcatgacttctgggtaaatgccaactgccctgacatccacccggcgggatggtgt
gagagcactggacacaaactgtacacccccaaaggctgcaaagaggaggagttctcctgg
gccagctacctgagaatgagtaaagcacaagttgcccctaaagaggtgttttccagccct
ggaagaactgatacggagtgtggtttcgaggtgggcatgaagctggaggcggtcgaccgc
atgaacccctctctcatctgcgtggcgaccgtgaccgacgtggtggacgaccgcttcctg
gttcactttgataactgggatgacacgtatgactattggtgtgacgccagcagtccatac
atccatcctattggctggtgccaagagaggagcctccccctcacgccacctcaaggttac
ccagacccaggcaggttctcctggccaaggtacctggacgagactggttctaccgcggtg
tcttctgaggcctttaaagtgcgtcctgctcatggcttccaggctcagatgaagctggag
gcagtggacagaaggagccccggcctgatccgggtggccacagtggaggaggtcgacacc
caccgcattaaggtccattttgatggctggagtcatatgtatgatgattggatggactcg
gaccaccctgacatccacccagtcggctggtgtgagagtacaggtcacccgctaaaagtg
cccccccgccccagggaacctgcaaccacaggccagtccagtttctcctccatgccttgc
aaaggaatcagccactccagatccaccaagtacagcttccatcacaggaagtgtccgaca
cccggatgtgatggctcgggtcatgtgactgggcggttcacagcacatcactgtctgtca
ggctgcccactggctgagcgaaaccagggcagactcaagaccgacctatcagatgcagag
gggagcagagcaaagcggagcatcttagtctttggccaaaggaccaaaaagtcccggtac
catggcaggattggccgtccccctaagtacagaaaaatccagcagagaacataccagacg
atggccacagagggtatgtgcccgtctctgttcatgtctgctttgtcagcccacccggac
cgaaccctgtctctgtgctgggagcaacactgcaaactgctgcctggcgtccagggcatc
catgctacacaggtggcagcatggaccgtggaggaggtctttggatttgtccagaatctg
actggttgtgaagagcaagcctgtgtcttcaaagaggaaatgattgacggagaggccttc
ctattactgacacagactgacatcgtcaaaatcatgagcatcaagctcggtccagccctc
aagatctctaacgccattttaatgttcaagagtactgacgaaggcctcaagtga
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