KEGG   Coregonus clupeaformis (lake whitefish): 121538132
Entry
121538132         CDS       T08357                                 
Name
(RefSeq) mRNA-decapping enzyme 1A
  KO
K12610  mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    121538132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121538132
   03036 Chromosome and associated proteins [BR:cclu03036]
    121538132
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     121538132
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     121538132
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    121538132
SSDB
Motif
Pfam: DCP1 mRNA_decap_C
Other DBs
NCBI-GeneID: 121538132
NCBI-ProteinID: XP_041701857
LinkDB
Position
24:40217293..40235261
AA seq 523 aa
METASKMSLAALQQQDPYINKLLDVTGQVALYTFNSKANEWEKTEIEGTLFVYARSASPH
HGFTIMNRLSTENLVEPINKDLEFQLQDPFLLYRNANLGIYSIWFYDKKDCQRITQLMVK
IVKQEAMQAHRGSPERANVPGRTNGCAEPRPIDILELLSKAKDEYHRTQTGETEMSVTAE
QGVNTETLKTAGGATEHAPSAPQPERNSHSGQRQITVEELFGSSLPKETGLLPAMPTQSS
TDPAAPSPANFLQAQHYAPSIPFQPLLAPRLTAAPGGNNRHLAPGLIPLMEARGGAGPSY
TLHPSPVFPGGPPGEPQHSVSPLLVAPSGAEARGPPPVPPLAYLGQDLLGSLKPSPSDLH
KPALAPNFLPSPLATPQSFREQIPNPAAICSIPTGPVQPQSKEMDVFAQSQKLLKTMPAV
PMKAGLVIPRAGTSLTGAEHSVLLSPSAFQHSVAKTTELQRQAAPPSPPSAATGAVEPPQ
PSCNRTQLQDTLIHLIKNDPAFLSAIHEAYLQILSKDLSNVKL
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggagaccgccagtaaaatgagcctagcagctctacaacaacaagatccgtatatcaac
aaacttctcgatgttaccggacaggtagcactgtacacatttaattccaaagcaaatgaa
tgggaaaagaccgaaatcgagggcaccttatttgtttatgccaggtctgcttcccctcat
catggcttcacaatcatgaatcggctaagcacagagaatcttgtggagcccatcaacaaa
gaccttgagtttcagctccaagaccccttcttgctgtacagaaacgctaacttgggtata
tacagcatctggttctacgataagaaggactgccagcgcatcactcagctcatggttaag
atcgtgaagcaggaagccatgcaggcccaccggggctccccagagagggccaacgtccct
gggaggaccaatggctgcgcagaacctcgccccatcgacatcctggagctcctcagcaag
gccaaggatgaataccacaggactcagacgggtgaaacggagatgtccgttactgctgag
cagggggtgaacacagagacgctgaaaacagctggcggtgctacagagcatgctcccagc
gccccacagccagaaaggaactcccactctggccagaggcagatcactgtggaggagctg
tttggcagttctctacccaaggagaccggcctgctgccagccatgcctacccagagttcc
acagaccctgctgccccgagccccgccaactttctccaggcccagcactacgccccctcc
atacccttccagcccttactggccccccgcctcacagcagccccagggggcaacaaccgg
cacctggcccctggtctgatccccctgatggaggccagaggtggcgctggcccaagctac
accctccaccccagccctgtgtttcccggtggacctccaggggaaccccagcactctgtg
tccccgctgttggtggctccatctggggctgaggctcgcggtcccccccctgtccctcca
ttggcctacctggggcaggatctcctgggctcactgaaacccagcccctctgacctccac
aaacctgccctcgcacccaacttcctgcctagcccgctggccacgccccagagcttcaga
gagcaaatccccaatcctgctgccatctgtagcattcccacaggccctgtgcagccacag
agtaaagaaatggatgtgttcgctcagtctcagaaactgttgaaaaccatgccagctgtt
cctatgaaggcagggcttgtgataccgagggcgggtacttcacttacaggggcggagcac
tccgtgctgctctcaccgagcgcctttcagcattctgttgccaagacaacggaactgcag
aggcaagctgcccctccctcccctccatctgcagccacaggggctgtggagcccccccaa
ccctcctgcaataggacccagctgcaggacacactcatccacctcatcaagaatgaccca
gcgtttctcagtgccatccacgaggcttacctccagattctctccaaggacctgagcaac
gtcaagctatag

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