Coregonus clupeaformis (lake whitefish): 121538161
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Entry
121538161 CDS
T08357
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00531
Glycosaminoglycan degradation
cclu01100
Metabolic pathways
cclu04142
Lysosome
Module
cclu_M00076
Dermatan sulfate degradation
cclu_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
121538161 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121538161 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
cclu02042
]
121538161 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121538161 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121538161 (si:dkey-72l14.3)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
121538161 (si:dkey-72l14.3)
Bacterial toxins [BR:
cclu02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
121538161 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Enzymes
121538161 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Enzymes
121538161 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
121538161
NCBI-ProteinID:
XP_041701890
LinkDB
All DBs
Position
24:complement(39356129..39362382)
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AA seq
512 aa
AA seq
DB search
MAWTELELRAGLRAGLHRALLPLLLQGLMLLTFPCLGGPPQPARNPLSPGQPFLVLWGIP
NKACSIRPDPGAFGMEREGRVSMFYEDTLGKYPYYTHQDQPVNGGLPQHTRLDGHLQKTG
EDLVAALPSTGYQGLGVLRWGQWSPQWGRNREKQGIYLEGSRALLRTFFPDWTTEEVEKW
SQVDFEAAAQSILMETLWEVRRLRPKALWGVSPYPNCYNSGPAQSLSNYTGRCPATEMAL
NDELLWLWKCCSALYPALTLEKLQGGTSGARLYTSNQIREALRVAGLAGTAYDLPVFPLV
RSVYTSTNTFLSEADLVNTIGESAAMGAAGVILWEKDQGVFSSRTQRACSELATFVREVL
GLYAVNVTTAARLCSVSLCQGRGRCVRRKPGSSAYLHLPPSNFLMTQGKVEGVQATGQLD
PGNLEAWKRDFQCQWYESMEGAAADEEVPKDRAQGALPPTLNSPLLSELNQGTRPTLALS
DHSGPSLTTPLLPLLLVLATALSLNTDLCLNL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggactgagctggagctccgggcagggctcagagctgggctacacagggcccta
ctaccacttctcctccaggggttgatgctccttaccttcccctgccttggtggtccccca
cagccggcacgcaatcctctgtcaccagggcagccttttctagtactatggggaatcccc
aacaaggcgtgttctatacgtcctgacccaggagcctttgggatggagagagagggccgc
gtgtccatgttttatgaggacactctggggaaatacccctattacactcaccaggaccag
ccggtgaatgggggtcttccccaacacaccagactggatggacacctccagaagacaggg
gaggacctggtggcagcgctaccctccacagggtaccagggcctgggggtactgcgttgg
ggccagtggtccccgcagtggggaaggaaccgtgagaaacagggcatctacctggagggc
tccagggctctgctgaggaccttcttccctgactggaccactgaggaggtggagaagtgg
tctcaggtggactttgaggcagcggcccagtccatcctcatggagacgctgtgggaggtg
aggaggctccgccccaaggctctgtggggcgtgtccccgtaccccaactgctacaactct
ggccccgcccagtcgctgtccaattacacaggtcgctgtcccgccaccgagatggcgttg
aacgacgagctgctgtggctatggaaatgctgctctgccctctaccccgccctcacacta
gagaagttgcagggcgggacctcaggggccagactgtacacgtccaatcagatccgagag
gcactgagagtggcaggcttggccgggaccgcctacgaccttcctgtgttcccattggtc
aggagtgtctatacatcaaccaatacttttctgtctgaggcggacctggtcaacaccata
ggtgagagtgctgccatgggggcagcaggggttatcctctgggagaaagatcaaggtgtc
ttctcttcaaggactcagagagcctgctcagagctggccacgttcgtgcgtgaggtcctg
ggcctgtacgccgtcaacgtgaccacagccgcccgcctgtgcagcgtctccctgtgccag
gggcgtggccgctgcgtacgccgcaaacccgggagctccgcctacctgcacctgccgccc
tccaacttcctgatgacgcaggggaaggtggaaggggtgcaggccacaggccagctggat
cctggaaacctggaggcctggaagagggacttccagtgccagtggtatgagtccatggag
ggggcggctgccgacgaggaggtccccaaggacagggcacagggagcccttcctcccaca
ctgaattcacccttgttgagtgagctgaaccaagggaccaggcccaccctcgctctgtca
gaccacagtggaccatcactcacgacacctctcctgcctctactgctggtattagccaca
gctctaagcctgaacacagacttatgcctgaacctctga
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