Coregonus clupeaformis (lake whitefish): 121538204
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Entry
121538204 CDS
T08357
Symbol
myt1a
Name
(RefSeq) myelin transcription factor 1 isoform X1
KO
K23192
myelin transcription factor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121538204 (myt1a)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121538204 (myt1a)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
121538204 (myt1a)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
121538204 (myt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2HC
MYT1
XhlA
DUF1664
MYO6_lever
Prominin
Motif
Other DBs
NCBI-GeneID:
121538204
NCBI-ProteinID:
XP_041701950
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All DBs
Position
24:37483925..37516455
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AA seq
1259 aa
AA seq
DB search
MKMKLCKTFLENEFRGQLLNQRWTRGDRISRFCEVKRSLRIKMSQEASDTRTRTRSKGIR
VPIELVGTELSSCPTPGCDGSGHVSGRYSRHKSVLGCPIVKKRKLAEAEAEAEENQPAPK
KKTPSLKLAMDEGFNAADSDAGSEAEHKEEEESEEEEQEDKENNKTPNPLESMKADCTQV
VPEDTEKVTSVEFDTIAATEVEAPQEDTEAATTTQQQASTEAEAETEAETEAEAETEAEA
ETEAETDTYRREEEVQVVAEIQAAEEEKEEEDEGTVDEDRTTEQPKGNDKTGRAEIEEKQ
KEEVGDEEEEEEEGVEEEKEEERQCVSQENSDHQYSSGDYSRHQAKEEGDEEEEEEEKEG
EEKEVVEEKEEEEKEEEEEEEEEEEKEEEDEVIHVEPAISLASSTLAQKCEDKEVAPEEI
NICTLLTEEEEEEEEGEEETEAGEVEEEDQYSHKASPTTVVIEIRSEEEEEEEEDDCLSQ
GSGVTDDSETWDMTRGNLGLLEQAIALKAKQVRGPHDDQQSPEDQRYQSPDDRASKPMDP
AIRHRGHHSKDKKEVKCPTPGCDGTGHVTGLYPHHRSLSGCPHKDRIPPEILAMHENVLK
CPTPGCTGQGHVNSNRNTHRSLSGCPIAAAEKLAKGGQFTPSHPQPSVSEPPTGSPHSDR
VLRPMCFVKQLEIPQYGYRPNMVPATPRANLAKELEKYSKVSFDYASFDVQVFGKPMLVP
KMPATSQPSPKAIKSKPFPKASSPSHSLSGGYAKSSSSSSSSGYDYSHDAEAAHMAATAI
LNLSTRCWERPENLSTKQQDPAGKEIDIEVDENGTLDLSMKKPIKREGMQSPDPSSSSSS
SSQQPGGVPLSQAHLQEEWEGPLDFTKPNCPKEEEEQDEMDFVAHSYTSSDAEDDDITQE
SMEDRKYPGEVTTSSFKVQFSPKDCKKEVLLCPTPGCDGSGHITGNYASHRSLSGCPLAD
KSLRTLMAAHSAELKCPTPGCDGSGHITGNYASHRSLSGCPRAKKGAVKTTPTKDDKEDS
ELLSRCPVPGCDSLGHISGKYATHRSAYGCPLAARRQKEGLLNGSPFSWKAFKTEGPTCP
TPGCDGSGHANGSFLTHRSLSGCPRASANKKRTRFPGDEYITAKFRASDVLDNDEDIKQL
NNEISELSESNSEMEDDMMNLHTQISSMEKNLKSMEEENKQIEERNDALYMELSGLSQAL
IRSLSNIQLPHIQEPMSEQNIDTYVDTLTHMFSNKDCYQNPENRALLESINQAVKGIEV
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaagctgtgtaaaacgtttttagaaaatgagttcagaggccagctgctgaac
cagaggtggacacgaggggacagaataagcagattctgtgaggtcaagaggagcctgcga
atcaaaatgagtcaggaagcatcagacacaagaacacggacccgctcaaaaggcatccga
gtacccattgaactggtgggaacagagttaagtagctgccccacccccggatgcgatggt
tcaggccatgtcagtgggagatattcccgacacaaaagcgttctcggatgcccaatagtg
aagaagaggaaacttgcggaggcggaggcagaggcagaagagaatcagcctgcccctaag
aaaaagaccccgtccctgaagttggccatggacgagggtttcaacgcagcagacagtgat
gctggcagtgaggcggagcataaggaggaggaggagtcagaggaggaggagcaggaggat
aaagaaaataacaaaacgccaaacccactggagtccatgaaagccgattgcacacaggtg
gtacccgaagacacagaaaaagtgacgtctgtcgagttcgacaccatagctgcaactgaa
gtagaggctccgcaggaggacacagaagcagccaccacaacccaacagcaggcttccaca
gaggcagaagcagaaacagaggcagaaacagaggcagaagcagaaacagaggcagaagca
gaaacagaggcagagacagatacatacagacgcgaagaggaggtgcaagtagtggcagag
atacaggccgctgaggaggagaaggaggaggaagatgaggggacagttgatgaagacaga
acaacagagcagcccaaaggcaacgataaaacagggagagcagagattgaggagaagcaa
aaggaggaggtaggagacgaggaagaagaggaggaggagggagtggaggaagagaaagaa
gaggagaggcaatgtgtgagtcaggagaactcagatcatcagtactccagtggcgactac
agcaggcatcaggcaaaagaggaaggagatgaggaagaagaagaggaagagaaggaggga
gaggagaaggaggtagtggaagagaaggaggaggaagagaaggaggaggaagaggaggag
gaggaagaggaggaaaaggaggaggaggatgaggtgatccacgtggagcctgccatctct
cttgcctctagtacgcttgctcagaaatgtgaggataaagaagtggccccggaggagata
aacatttgtaccctgttgacagaagaggaggaagaggaggaggaaggagaggaggagaca
gaagcaggggaggtggaagaagaagaccaatattctcacaaagcctcacctaccacagtg
gtcattgagatacgatctgaggaggaggaagaggaggaggaagatgactgtctctcacag
ggttcgggcgtgacagatgactcggagacctgggatatgacccgggggaacttagggctg
ctggagcaagccatcgcactaaaggccaagcaggtgagagggccgcacgacgaccaacag
tctcctgaggaccagcgctaccaaagcccagacgacagggccagcaaacccatggaccca
gccattcgacacagaggacaccacagcaaagacaagaaagaggtgaaatgccccacccct
gggtgtgatgggacgggccatgtgactgggctctacccccaccaccgcagcctctctggg
tgccctcacaaagacaggatcccacctgagatcctggccatgcacgagaacgtgctgaag
tgtccaactccaggatgcacaggccaaggtcacgtcaacagcaatcgcaacacacaccgc
agtctgtctggttgtcccatcgcagctgcagagaagctcgccaaggggggccaattcacc
cccagtcacccccagccttcagtcagcgagcccccaactgggagcccccactcagacaga
gttctcagacctatgtgttttgtgaagcagctggagatccctcagtatggctacagaccc
aacatggtgcctgccacaccccgcgccaacctggccaaagagctggagaaatactccaag
gtttccttcgactatgcaagcttcgacgtccaggtgtttgggaagcctatgctggttcca
aagatgcccgccaccagtcaaccctcacccaaagccatcaaatctaaaccattccctaag
gcctcgtccccaagccatagcttgtcaggaggatatgcaaagagcagctcctcctcgtcc
tccagcggctacgattactcccatgatgctgaggctgctcacatggctgccactgccatc
ctgaacctgtccactcgctgctgggaaaggcccgagaaccttagcaccaaacagcaggac
ccagccggcaaggaaattgatattgaagtggatgagaatgggacactggacctgagcatg
aagaagcccatcaagagggaagggatgcaatcaccagacccctcttcatcctcctcctct
tcctcgcagcaaccgggaggtgttcccttgtcccaggcccacctgcaggaggagtgggaa
gggcctctggacttcaccaagccaaactgtcccaaagaggaggaggagcaagatgagatg
gactttgtggcccactcctacacctcctctgatgcagaggatgatgacatcactcaggag
agcatggaggacaggaagtacccaggcgaggtcaccacgtccagcttcaaggttcagttc
tcgcccaaagactgcaaaaaagaagttctactatgtcccaccccaggttgtgatggcagt
gggcacatcactggaaactacgcgtcacatcggagtctgtcaggctgtcctcttgctgat
aagtctcttcggaccctcatggctgcccactctgctgaactaaagtgtccgacccctgga
tgcgatggatcaggtcacatcactggaaactacgcctcccatagaagtttgtctggatgc
cctcgtgctaagaaaggtgctgtcaagacaacacccaccaaggatgacaaggaagactct
gagcttctaagtagatgcccggtgcccggctgtgacagcctaggccacatcagtgggaag
tatgccacccaccgcagtgcctacgggtgccccctggcagcgcggcgtcagaaggagggg
ctccttaacggctctcctttctcctggaaggcctttaagactgagggacccacctgtccc
acccccggctgtgacggatcaggacacgccaatggcagcttcctcacacaccgcagtctc
tctggttgtcccagagcctccgctaataagaagagaaccaggtttcctggagatgagtac
attacagcaaagttcagggccagcgatgttctggataatgatgaagatatcaagcagctg
aacaatgagatcagtgaactgagcgagtccaactcagagatggaggatgacatgatgaac
ctgcacacacagatctcgtccatggagaagaacctgaagagtatggaggaggagaacaag
cagatcgaggagagaaacgatgccctgtacatggagctgtctggcctgagccaagctctg
atccgcagcttgtccaacatccagctgccacacattcaggaacctatgtcggagcagaac
attgatacatatgtggacaccttgacccatatgttctccaataaagattgctaccaaaac
ccggagaaccgcgctctgttggagtccatcaaccaagcggtaaaaggtatcgaagtgtag
DBGET
integrated database retrieval system
