Coregonus clupeaformis (lake whitefish): 121538213
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Entry
121538213 CDS
T08357
Name
(RefSeq) TBC1 domain family member 25-like isoform X1
KO
K24799
TBC1 domain family member 25
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121538213
Membrane trafficking [BR:
cclu04131
]
Others
Specific organelles associated proteins
Auto phagosome
121538213
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GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
121538213
NCBI-ProteinID:
XP_041701967
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Position
24:complement(37135369..37153768)
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AA seq
892 aa
AA seq
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MSSELLNMATEEERGVVRVKVKKCEGMLPVEFRSFAVDPQITSLEVLQHILIRAFELNGK
RNFGISYLSRDRGGVEVYLSLLSDWDLDAAFVSAAKPYLQLKMDIHLSEDSPVMEEWDII
SPKDVIGSDQLPGDRRSLAAAALPFTQSLLSQMMGRTLSRVQQALSWSYGEEVKPFKPPL
SDAEFHSYLNGQGQLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGQERMDYMK
SKTREYDQLKGEWSARASPEDLEFIRGNVLKDVLRTDRAHPYYAGSEDSPHLTALTDLLT
TFAITHPQVSYCQGMSDIASPILAVMDNEAHAFICFCGIMKRLEGNFCPDGQFMSVKFQH
LKLLLQYSDPEFYCYLVSRGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPP
ETEVELLGPPLETDQTIVTCESGVEKRPAITGDAGEEGEQKEKQRRRHMLRPSREEADGG
RRIKMEEGKREDRGARREGEGNFDMPYVGKEQAHNNVPVPSFEKQTSFDEFKYYSARNKD
SLDFEERAPPEGPVEMEASSHPGERAHLITDVDKSSNPDTEERSSPNGQIASPASSFPPG
LPSWKNGSSLSPGSTPSPSSWRGASPDTPSPKFTSPILPNGRVESPEKATRGFASFASVP
NGTGANSPATPTGRSLVSSPLLSRALLSSPILSFGRALPSLPVGTVNKSFSSNLQSPCSR
ASSTAPHTPNSTKPENTTIKPCSLPPPQEFGKGNPFMLFLCLSILLEHRDHIIKNSFDYN
ELAMHFDRLVRRHNLGRVLQRAKALFADYLQSEVWDSEEGDEVSSDSPTTVTAALHSPPP
SATRPLFTPLSSPQPSSPNSTYNLADTIPSPSSPLPLSFLTSVTISPTHYND
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgaactcctaaacatggcaactgaggaggagaggggcgtagtgcgtgtcaaa
gtcaagaagtgtgaggggatgctgccagtggagttccgctcgtttgctgtggatcctcag
ataacgtcactagaggtgctacagcacatcctcatccgagctttcgagttaaatggcaaa
cgcaactttgggataagttacctctcccgggaccgtggaggtgtggaagtgtatctctct
ctcctttctgactgggatttagatgctgcttttgtcagtgctgctaaaccttatctacag
ctcaagatggacattcatctctccgaagacagtcccgttatggaagaatgggacataata
agccccaaagatgtgattggttctgaccagcttcctggggataggaggtccttggcggct
gccgcccttcccttcacccagtccctgctgtcccagatgatgggtcgaacgctgtccaga
gtacagcaggccttgagctggtcgtacggggaggaggtgaagcctttcaagccccctctg
agtgatgccgagttccacagttacctcaatggccagggccagctgtcccggccagaggaa
ctgaggctgcgcatctatcatggtggggtggagccctctctacgcaaggttgtctggcga
tacctcctgaacgtgtaccccgatgggctgaccggtcaggagagaatggactacatgaag
agcaagactagggagtatgaccagctgaagggggagtggtcagcaagggccagtccagag
gacctggagttcatcaggggcaacgtactgaaggacgtcctgaggaccgaccgggcccat
ccctattacgccggctcagaggacagcccccacctcactgctctcaccgacctgcttacc
acctttgccattacacatccacaggtgtcgtactgccaaggcatgagtgatattgcttct
ccgatacttgccgtcatggacaatgaggcacatgcattcatctgtttctgtggcatcatg
aaacgcctagagggcaacttctgcccggatggccaattcatgtccgtcaagttccagcat
ctgaagctgctactgcagtactccgaccccgagttctactgttatttggtgtcccgcgga
gctgatgacctgttcttctgttaccgctggctgctcttggaactcaaacgggagtttgcc
ttcgacgatgccctgaggatgctggaggtcacctggagctccctgccccctgaccctcct
gaaacagaagtggagcttcttgggccgccgctagaaacagaccagaccatagtgacatgt
gagagtggtgttgaaaagaggcccgccattacaggggatgctggtgaagaaggggagcag
aaagagaagcagcggagacgacacatgttgaggccctcaagagaggaggcagatgggggg
agaaggatcaaaatggaggaaggaaagagggaggacagaggagccagaagagagggtgag
gggaactttgacatgccttacgtaggaaaggagcaggcgcacaacaatgtgcctgttcct
tccttcgagaagcagaccagttttgatgagttcaaatactacagtgcacggaacaaggac
agcttagatttcgaggagagagccccaccagagggtcctgttgagatggaagcctcctcg
cacccaggggagagagcgcatcttataacggacgttgacaagtcctccaacccagataca
gaggagaggagctccccaaatggacaaatagcctctccggcctcctcgtttccccctggc
ctgccaagctggaagaatggttcctctctgtctccagggtccactccctccccctcgagt
tggagaggtgcctccccagacaccccgtcaccaaagttcacctctcccattttacccaac
ggaagggttgagtcgccagagaaagccacaagagggtttgcttcctttgcctcggtgccg
aatggaaccggagccaactcacccgctacccccacagggaggtccttggtttcctctccg
ctgttgtctcgagcgttgctctcctcgcctattttgtccttcgggagagctcttccttcg
ctgcccgtcggaacggtgaacaagtccttttctagtaacctccaatctccttgcagcaga
gcctccagcaccgcgccccacactccaaattcaaccaaaccagagaataccaccatcaaa
ccttgttccctgccacctcctcaagagtttggcaaaggaaatcctttcatgttgttcctg
tgcctgtcgatcctgctggagcatcgagaccacattataaagaacagctttgattacaac
gagctggctatgcactttgaccgccttgttcgtagacacaatctgggcagggtgctgcag
cgcgccaaggccttgtttgcggactacctgcagagtgaggtatgggattcggaggaaggg
gacgaggtcagctctgattcgcccaccacagtcactgctgctctgcactccccgcccccc
tcggccaccaggcctctttttacccctttgtcatccccacaaccatcctccccaaactcc
acctataacctggctgacaccataccttccccttcttcacctctccctctctccttcttg
acttctgtcactatatccccaacacactacaatgactaa
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