Coregonus clupeaformis (lake whitefish): 121538216
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Entry
121538216 CDS
T08357
Name
(RefSeq) paired box protein Pax-7 isoform X1
KO
K09381
paired box protein 3/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121538216
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121538216
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
Homeobox_KN
HTH_23
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
121538216
NCBI-ProteinID:
XP_041701975
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Position
24:36831229..36900106
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AA seq
511 aa
AA seq
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MQSSLPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKI
VEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKRIE
EYKRENPGMFSWEIRDKLLKDGVCDRSTVPSGEASSVSSISRVLRARFGKKDDEEDCDKK
DEDGEKKTKHSIDGILGDKGSRMDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAF
ERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPGSG
MPTLPTYQLQDSGYPTTTLSQDGSGTVHRPQPLPPSTMHQGGLSGGDSGSAYGLSSNRHG
FSSYSDSFMSPSASSNHMNPVSNGLSPQVMSILSNPSGVPSQSQHDFSISPLHGSLESSN
SISASCSQRSSDQSIKTVDSMASSQSYCPPTYSTTSYSVDPVTAGYQYSQYGQTAVDYLA
KNVSLSSQRRMKLGDHSAVLGLLQVETGQAY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgtctttgccaggaacagtacctcgaatgatgcgaccagcgcctggacaaaac
tatccccgcacgggcttccctttggaagtgtcaactcccctgggtcaaggtcgggtgaac
caactcggtggagtgttcatcaacggaagaccactgccaaatcatatccgacacaagatt
gtggagatggcccaccacggtatccgtccctgcgtgatctctcgacagctacgagtttcc
cacggttgcgtgtccaaaattctttgtcggtatcaagaaacaggatcgatccgacccggg
gcaataggaggaagcaaacccagacaggtagcaacgcctgatgtggagaaacggattgag
gagtacaagcgcgagaaccccggcatgttcagctgggagatccgagacaagctgctgaag
gacggggtgtgtgacagaagcacagttccttcaggtgaggcctcatctgtgagttccatt
agtcgtgttctgagagctcgatttgggaagaaagatgatgaagaagattgtgataaaaaa
gatgaagatggagagaagaaaaccaaacacagcatcgatggcattcttggcgataaaggt
agccgtatggacgaaggctcagatgtggagtcggagccagaccttcccctgaagaggaag
cagaggcgcagtcgcaccactttcacggccgaacagctggaggagctggagaaggccttt
gagaggacacactaccctgacatctacaccagagaagagctggcccagaggactaagctc
acagaggcccgtgtacaggtgtggttcagcaaccgacgggccaggtggcgtaagcaagcg
ggagccaatcagctggcggcgttcaatcacctgttgccgggcggattcccaggcagcggc
atgcccacgctacccacctaccagctccaagattccggctaccccacaaccacgctatca
caagacggtagtggcacggttcaccgcccccagccattaccaccgtccaccatgcaccag
ggagggctgtcgggcggggacagcggctcggcatacggcctgtcgtccaaccgccatggc
ttctccagctactctgactccttcatgagcccctcggcatccagtaaccacatgaacccc
gtcagcaacggcctctccccacaggtgatgagcatcctgagtaaccccagcggcgtgccc
tcccagtcccagcatgacttctccatctcgcccctccacggcagcctggagtcctccaac
tccatctcggccagctgcagccagcgctcctcagaccagtccatcaagacggtggacagc
atggcctcctcccagtcctactgcccacccacctacagcaccaccagctacagcgtggac
cctgttaccgcaggctaccagtacagccaatacggacagactgctgtggactacctggcg
aagaacgtgagcctgtccagccagcggaggatgaagctgggagaccactcagctgtcctg
ggactgctccaggtggagacgggacaggcctactag
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