Coregonus clupeaformis (lake whitefish): 121538302
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Entry
121538302 CDS
T08357
Name
(RefSeq) chloride transport protein 6-like isoform X1
KO
K05015
chloride channel 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121538302
Ion channels [BR:
cclu04040
]
Chloride channels
Chloride channel (CLC)
121538302
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Paralog
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Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
121538302
NCBI-ProteinID:
XP_041702113
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Position
24:31472056..31533111
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AA seq
867 aa
AA seq
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MACCGNCLCCHCCCRDEETLTPEELTILGETQDEEDEILPRKDYESLDYDRCINEPYVEV
LEGMNNKKAKKYEAVRWMLVFAIGVSVGLVGLFVDFFVRLFTQLKFNLVGKSVEECSEKG
CLALSLFELLAFNMTFIFIASVLVLIEPVAAGSGIPEIKSYLNGVKIPGIVRLRTFLCKA
IGVLFTVAGGLFVGKEGPMIHSGAIVGAGLPQFQSITFKKINFDIPYFRTDRDKRDFVSA
GAAAGVAAAFGAPIGGTLFSLEEGSSFWNQALTWKVLFCSMSATFTLNFFRSGINYNKWG
SFQLPGLLNFGEFKCSDGEKKCHLWTVVDLAFFVLMGVVGGLLGAFFNYINTRLAKYRMR
HVHPKAKFVRVLESLLVAMVTTVVIFVASMTMGECRDLASPTTNNNSTALVSLNEDVINS
TIRQFFCPNKTYNDMATLFFNSQEVAIHQLFHQDGTFSPVTLTVFFVLYFLLSCWTYGVS
VPSGLFVPSLLCGAAFGRLVANLLKINLGMDIYSGTFALIGAAAFLGGVVRMTISLTVIL
IESTNEITYGLPIMITLMVAKWTGDFFNKGIYDIHIHLRGVPMLEWETEVEMDKLTASDI
MEPNLTYVYPHTRIQSLVSILRTTVYHAFPVVTENRDNEHEFMKGNILISNNIRFKKASV
LTRAGEQRRRCQSMKSYPSSELRNVCDDQAVAVVPALEEGQDMLQQMLERRHVPYPNLYP
DQSPSEEWTMEERFRPLTFHGIILRSQLVNLLIRGVCYAENQLSATQPRLSYAEMTEDYP
RFPDIHDLDLALLNPRMIVDVTPYMNPCPYTVSPNTHVSQVFNLFRTMGLRHLPVVNAVG
EIVGIITRHNLTHKFLLVKLRQHYITI
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggcatgctgtgggaattgcctatgttgtcactgctgctgcagggatgaagagaccctc
acacccgaggaactgactattcttggggaaactcaagatgaggaggatgagatccttcca
aggaaagattatgagagcctggattatgacaggtgcatcaatgaaccatatgttgaggtt
ctggagggaatgaacaataagaaagccaaaaagtatgaagctgtgaggtggatgctggtg
tttgcaattggagtttcagtaggcctggtgggccttttcgtggactttttcgtacgcctc
ttcactcagctcaaattcaacttggtgggaaaatctgtggaggagtgcagtgagaaaggc
tgcctggctctgtcgcttttcgagctgctggccttcaacatgaccttcatcttcatcgcc
agtgtgttggtcctcattgagcctgtagctgcaggctcgggaatccccgagatcaagagc
tacctgaacggagtgaagatacccggaatagtccggctacggactttcctctgcaaggcc
atcggagtcctcttcaccgtagccggaggtctgtttgtggggaaggagggtccaatgatc
cacagcggagccattgtgggagccggcctacctcagtttcagagcatcactttcaagaag
atcaactttgacatcccttacttccgcactgacagggacaagcgggactttgtgtcggcg
ggggcggcagctggggtggccgctgcgtttggggcgcctatagggggcacgctcttcagc
ctggaggaaggctcctctttctggaaccaggcactcacctggaaagtgctcttctgctcc
atgtcggctacgttcacccttaacttctttcgctctgggatcaactacaacaaatggggt
tcgttccagctacccggcctgctcaactttggagagttcaagtgttcagatggggagaag
aagtgccacctgtggacggtggtggacctggccttctttgtcctgatgggggtggtggga
gggctgttgggggccttcttcaactacatcaacacgaggctggccaagtaccgcatgaga
cacgtccaccccaaggccaagtttgtcagggtcctggagagtctgctggtcgccatggta
acgacggtggtgatattcgtggcgtccatgacaatgggcgaatgtcgtgacttggcctcc
cccacaaccaacaacaacagtacagcgctggtgtcactcaacgaagacgtcatcaactcc
accatccgccagttcttctgtcccaacaagacgtacaacgacatggccactctgttcttc
aactctcaagaggtggccatccaccaacttttccaccaggacggtacgttcagccccgtg
acgctgacagtgttctttgtgctgtacttcctgttgtcgtgctggacatacggcgtgtcg
gtgcccagtggcctctttgtgccctcgctgctctgtggcgccgcttttggacgcctggtg
gccaacctcctcaaaatcaacctggggatggacatctactccgggaccttcgctctgatt
ggagcagccgccttcctgggaggcgtggtccggatgaccatcagcttgactgtcattctc
atcgaatcaaccaatgagatcacctacggcttgcccattatgataaccctcatggtggcc
aagtggacgggggatttcttcaataagggcatctatgacatccacattcatctgagagga
gtgccaatgctggagtgggaaacagaggtggagatggacaaactgacagccagtgacatc
atggagcccaacctgacgtacgtgtacccccacacgcgcatccagtccctggtgagcatc
ctgcgcaccaccgtctaccacgccttccctgtggtcaccgagaacagggacaacgagcac
gagttcatgaagggcaacatcctcatcagcaacaacattcgcttcaagaaagcgagcgtg
ctgacgcgggcaggggaacagcggcggcgctgccagtccatgaagtcgtacccgtccagc
gagctgcgcaacgtgtgtgacgaccaagcggtggccgtggtgcccgccttggaggagggc
caggacatgctacagcagatgctggagagaagacacgtgccctaccctaacctgtatcca
gaccagtcccctagcgaggagtggaccatggaagagcgcttccgacctctgactttccac
ggcatcatcctgcggtcccagctggtcaacctgctcatccgtggcgtctgctacgcagag
aaccagttgagtgccacgcagcccagactgtcatacgctgagatgacggaggactacccc
cgtttcccagacatccacgacttggacctggccctcctcaacccccgcatgatagtggac
gtcaccccatacatgaacccgtgcccctacacagtgtccccaaacacgcatgtgtcccaa
gtttttaacctgttcaggaccatgggcctccgacacctgcctgtggtcaacgctgtagga
gagattgtgggaataatcacacgacacaatttaacccacaagttccttttggtgaaactc
agacagcactacatcaccatttga
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