Coregonus clupeaformis (lake whitefish): 121538335
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Entry
121538335 CDS
T08357
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121538335 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121538335 (lamb2l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
DUF7310
Fib_alpha
PKcGMP_CC
FPP
Motif
Other DBs
NCBI-GeneID:
121538335
NCBI-ProteinID:
XP_041702159
LinkDB
All DBs
Position
24:complement(30143779..30203057)
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AA seq
1850 aa
AA seq
DB search
MAFCQDLLTSAMAAYLGIFILALSVVGQQLPSSPHGCMEGSCYPATGNLLIGRNINLSAT
STCGLHGPEHYCIVSHLQELDKCFACNSQRPYDPYYHKNSHRVENVIQLKDSNEDLTWWQ
SVNGEEGVSIRLNLEAEFHFTHLIMKFKTFRPAAMLIERSADFGRSWRPYRYFAYNCTKT
FPRVPSHALHYINDVICEERYSDIEPSTEGEVIYKVLDPAIHVKDPYSLEIQELLRITNL
RINFTKLHTLGDNLLDRRSDVLQKYYYSLYELVVRGSCFCYGHASECAPVPGVDARDSGM
IHGRCVCKHNTEGLNCERCRVFHNDLPWSPAEANNPHTCRECNCNGHSSECHFDMAVYLA
TGNASGGVCDHCLHNTMGRNCEMCKPFYYKDPSRDIRDPAACTACDCDPVGSMEGGVCDS
HTDLNMGMIAGQCRCKLNVKATRCDYCKEGYYGLTHNDPQGCQPCNCDHRGIIMLGAPCD
QISGDCSCKRYVTGRYCNQCLPEYWGLSNDLAGCRACDCDFGGAYSNRCMVENGQCDCRR
HLIGRQCSDVQPGYFCAPLDYYRYEAEDAVGHSPSDHNLPGKARPQAEVDCVEHLNNQLR
RHRRHRRIATTQQQRTALRRIRQLQQTPDVRSVHRERSQGHMVTWTGPGFARVKDGAGLV
FTIDNIPHAMEYDIMIRYEPESTEDWEAIVSVTSLLLPTSSRCGNLLPTEQLYTVTLPHH
RRYVQMPRPFCFEPSNRYVVAIRFQRHGVSQRHLTAFILVDSLVLIPKYTELPGFQGNDP
AVEERRDEMVRYMCLDSFLATPMPMLAEMCTKLICSISAILHDGALQCQCDPQGSLSAEC
DRVGGQCRCKPNVIGRRCDQCAPGTYGFGPYGCTACDCHSQGSLGHQCDPATGQCPCRQG
ASGRQCSDCQPGQWGFPSCRPCQCNGHADDCNPQTGACQACRDYTDGQYCERCVNGFFGN
PVLGSGDHCRPCACPGNPGSGHSNGDSCHTDISSNQILCNCKEGYTGPRCERCAPGYYGN
IALPGGQCRPCQCSGNIDTQDPESCDPSTGQCLRCLYNTDGPSCSDCKHGYYGNALAQDC
RRCTCVTAGTQQSYCSDGHCHCDRQTGACPCRENVVGHNCDQCAPDYWNYGTDRGCEQCG
CHPHHAMGSHCNMFSGQCHCQQGFGGRQCTECEQFHWGDPRVQCEECNCHRLGSEMAQCD
RVTGVCECKEGAAGQRCDECARGFTGAFPKCVRCHPCFELWDDAVCMIRRDLDHIRHDIQ
KIVERGETPGVGDKRIRELENKLAQVQDLIRDGDWDRLHQLIGQSIDDLRAEIALTDGRL
MGVAWELNGTAVQDEVLRRNLTQMERELRDLNTTLVHSRQEQENYLSSGFQDQFDNVKKY
YGESQEAQQKCNASVSGPFSPVEESKATRAHTEGLLNKRRDKFLRTVAAQKKSLSELQNK
AQDVDKKVHHLSHKVCGGHSNASSNGTCHDSPCGGAGCRDNDGRRVCGGDGCNGTVSASL
KGLKHANDVTDNLTAASEDLQGMAKKLQDLAMLTQDVKNQAMDTLDKAQKKKDLFENSNK
KLKELIQKIKDFLTEEGADPESIEKVAQQVLAISLPFNRTTLDSMVQQIKDNINNLTDVE
GVFNHTSQQLHQAKELLNRAKDAKTRAEGVKDTANMTKQSLDASEKAIQNATKALDNALN
NLNSTRNATATVEEKLQDLEVKQMDAMMRLANLSMGVEALKTKTDQNREMAQDAKNQAKN
ATNAASGLEQRLNETEDRYKELQMKVDSLDGASGGLGNVNQRAKEIKKEAEDLLTKANKG
IETLQKLERKFRNNEQRMQDQQTELGELEKNATDARDAIRKQVQTYNNCN
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atggccttctgtcaagatctattgacgtccgccatggctgcatatctgggcatctttatt
ttagctcttagtgttgtgggacagcagctcccctcaagcccgcatggctgcatggagggc
agctgttacccggcaacaggcaacctgttgattggccgaaacattaatctcagcgccacc
tccacttgtggtcttcatgggcctgaacactactgcatagtcagccacctgcaggaattg
gacaagtgttttgcgtgtaactctcagcggccttatgacccatactaccacaaaaacagt
caccgcgtggagaacgtcatccaactcaaggacagcaacgaggacctcacctggtggcag
tccgtcaacggagaggagggtgtcagtatcagactcaatctggaggcagaattccacttc
actcacctcatcatgaagtttaagacattccgaccggccgccatgctgatagagcgttcg
gctgattttggtcgctcctggagaccgtaccgttattttgcctacaactgcaccaagacg
tttccacgtgtgccctcccacgccctccactacatcaatgatgtcatctgtgaggagaga
tattctgacatcgagccctccacggaaggagaggtcatttataaagtgcttgaccctgcc
atacatgtgaaagacccatacagtctggagattcaagagctgttgcggatcaccaacctg
cggatcaacttcaccaagctgcacaccctgggagataacctgctggaccggcgttctgac
gtgctgcagaagtactattactccctgtatgagctggtggtgaggggcagctgcttctgc
tacggacacgcctcagaatgtgcccccgtgccaggggttgatgccagggacagtggcatg
atccatgggcgatgtgtgtgtaaacacaatactgaggggttaaactgtgaacgctgcaga
gtcttccacaacgacctgccctggagcccagccgaggccaacaaccctcacacatgcaga
gaatgcaactgtaacggtcactccagcgagtgtcactttgacatggcggtgtacctggcc
acgggcaatgccagcggtggcgtctgtgaccactgtctccacaacaccatgggacgcaac
tgtgagatgtgtaaaccattctactataaggaccccagcagggacatcagagacccagcc
gcttgtactgcgtgtgactgtgatcctgtgggttccatggagggaggtgtgtgtgacagc
cacacagacctgaacatgggcatgatcgccgggcagtgccgctgtaagctcaacgttaag
gccacccgctgtgactactgcaaggagggctactacggcctgacccacaacgacccacag
ggctgccaaccgtgtaactgtgaccatcgtgggatcataatgctgggagcaccatgtgac
cagatcagtggggactgctcctgtaagagatacgtcacaggccgctactgcaaccagtgt
ctgccggagtactggggtctcagtaatgaccttgcaggctgccgagcctgtgactgtgac
tttggtggagcctacagcaacaggtgtatggttgaaaatggccagtgtgactgtagaagg
cacctgattggtcgacagtgttctgacgtgcagcctgggtacttctgtgccccactggac
tactacagatatgaggcagaggacgccgttggccactcgcctagtgaccacaaccttcca
ggcaaggccaggccccaggctgaggtcgactgtgtggaacacctcaacaaccagctgagg
agacacagacgccacagacgcatcgccaccacccagcagcagaggacagcactgaggcgc
atccgccagctgcagcaaacgcctgatgtaaggagtgttcacagggagagatctcagggt
cacatggtcacctggactggacctggttttgcccgggtcaaagatggtgctggactggta
ttcacaatagacaacatcccccatgccatggagtatgacatcatgatccgctatgagcca
gagtctactgaggactgggaggccatagtgagtgttacctccctgctgctgcccaccagc
tcccgctgtggcaacctgcttcccactgaacagctctacactgtcaccctgccacaccac
aggaggtatgtccagatgcccaggcctttctgctttgagcccagtaaccgttatgtcgtg
gccattagattccagcgccacggagtgtcccagagacacctgaccgctttcatcctcgtt
gattcgctggtgctgatccccaagtacacagagctgcctggtttccagggtaacgacccc
gcggtggaggagcgccgtgatgagatggtgcgctacatgtgtctggactccttcctggcc
acgcccatgcccatgctggcagagatgtgcaccaagctcatctgcagcatctctgccatc
ctgcatgatggagccctgcaatgtcagtgcgacccccaggggtctctcagtgctgagtgt
gacagggtcggaggtcagtgtcgctgtaaacccaacgtgattggacgacggtgtgaccag
tgtgcacctggcacttacggctttggaccatatggctgtactgcctgtgactgccattcc
cagggctctctggggcaccagtgtgacccggcgacagggcagtgcccatgcagacagggg
gccagcgggcgccagtgttcagactgccagcctggccagtggggcttccccagctgcagg
ccgtgccagtgtaacggtcacgctgatgactgcaacccacaaacaggggcgtgccaggcc
tgcagagactacactgatggacagtactgtgaaaggtgtgtgaatggtttctttgggaac
ccagtgctggggtctggagatcactgtcgaccatgtgcctgtcctgggaacccaggaagt
ggacactccaacggggactcctgtcacactgacatctcatccaatcagatcctctgcaac
tgtaaagagggctatacaggccctcgctgtgaacgctgtgcccctggttactatggcaac
attgcgctcccaggggggcagtgccgcccgtgccagtgcagtggcaacatcgacacccag
gacccagagtcatgtgaccccagcaccggccaatgcctgaggtgcctgtacaacacggac
ggcccctcctgctccgactgtaaacacggttactatggcaacgccctggcccaggactgc
aggcgctgcacatgtgtaacagcaggtacacaacagtcatactgcagtgacggtcattgc
cactgtgacagacagacaggagcatgcccgtgtcgggaaaatgtggtcgggcacaactgt
gaccagtgtgcccccgactactggaactatggcacagacagagggtgtgagcagtgtggg
tgccaccctcatcacgctatgggatcccattgcaacatgtttagtggacagtgtcactgt
cagcaaggctttgggggaaggcagtgcacggagtgtgagcagttccattggggagaccca
cgcgtgcagtgtgaagagtgtaactgtcaccgcctgggctcagagatggcccagtgtgac
cgtgtgacgggggtgtgtgagtgtaaggagggggcggcggggcagcggtgtgacgagtgt
gcccgcgggttcaccggggcattccctaagtgtgtccggtgccacccctgctttgagctg
tgggatgacgcggtgtgtatgatccgccgggacctggaccacatccgccatgacatccag
aagatcgtggagaggggagagacgcccggcgtgggagacaaacgcatccgcgagctggag
aacaaactggcccaggtacaggatctgatccgagacggagactgggacagactacaccag
ctgattggccagtccatcgatgacctcagagcggagatagctctgactgacgggcgtctg
atgggtgtggcctgggagctgaatgggacagcggtgcaggacgaggtactaaggaggaac
ctgacccagatggagagagaactcagggacctcaacaccactctggtgcacagccgccaa
gaacaggagaactacctcagctctggtttccaagatcagtttgacaatgtgaagaagtac
tacggtgagtcccaggaggctcaacagaagtgcaacgcctcagtgtccggtcctttcagc
cctgtggaggagtctaaagccacacgtgcacacaccgagggccttctgaacaagagacgg
gataagttcctgcgcaccgtggcggcccagaagaaatcactgtcagagctgcagaacaaa
gcccaggatgtggacaagaaagtccaccacttgagccacaaggtatgtggtggccattcc
aatgccagctccaatggcacatgtcacgacagcccatgtgggggtgctggttgtcgtgac
aatgacggtcgccgggtgtgtggcggggatgggtgtaacgggactgttagcgcctcccta
aagggactgaaacatgccaatgatgtcacagacaacctgactgctgccagtgaggatctc
cagggtatggctaaaaagctccaggacctagctatgctgacccaggatgtgaagaatcaa
gccatggacaccctggacaaagcccagaagaagaaggacttatttgaaaactccaataaa
aaactcaaggaattaattcagaagatcaaagacttcctgactgaggagggtgcggaccca
gagagcatagagaaggtggctcagcaggtgctggccatatctcttcctttcaacagaacc
actctagacagcatggtccagcagattaaagacaacattaacaacctgacagatgtagag
ggggtcttcaaccacacctcccagcaactccaccaggccaaggagctgctcaaccgagct
aaggatgccaagacacgggcagaaggagtgaaggacacagccaacatgactaagcagtct
ttggatgcgtctgaaaaggctattcagaatgcaaccaaagccctggacaatgccctgaac
aatctcaacagcacaaggaacgccaccgcaacggtggaggagaaacttcaggatctggag
gtcaagcagatggatgctatgatgcgactggccaacctgtcgatgggggtagaggcacta
aaaaccaagacagatcagaacagggagatggcccaagatgccaagaaccaggccaaaaat
gccactaatgcagcatcgggactggagcagaggctgaatgaaacagaggatcggtacaag
gaactgcagatgaaggtggactctctggatggggcctcggggggcctggggaacgtcaac
cagagggccaaggagatcaagaaggaggctgaagacctgctcactaaggccaacaagggc
atagaaaccctacagaagcttgagaggaagttccgtaataatgagcagagaatgcaggac
cagcaaaccgagctaggggaactggagaagaacgccacggacgcccgggatgctatacga
aagcaggtgcagacatacaacaactgtaactga
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integrated database retrieval system