Coregonus clupeaformis (lake whitefish): 121538336
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Entry
121538336 CDS
T08357
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510
Focal adhesion
cclu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121538336 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121538336 (lamb2)
BRITE hierarchy
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
Alanine_zipper
F5_F8_type_C
EzrA
Motif
Other DBs
NCBI-GeneID:
121538336
NCBI-ProteinID:
XP_041702160
LinkDB
All DBs
Position
24:complement(30089728..30141296)
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AA seq
1797 aa
AA seq
DB search
MHASLVMFICALAYASAREPDHAHGCTHGSCYPATGDLLVGREKSLKTSSTCGSRKKDPY
CIVSHLQDEKKCFQCDSRRPYDPVYNTISHRIENVITTFKPHRKKSWWQSENGKPDVFIQ
LDLEAEFHFTHLIMIFKTFRPAAMVIERSADFGRNWQVYRYFAYDCDSVFPGVSKGPLRK
VDDVICESRYSDIEPSTEGEAIYRVLDPAIHIEDPYSPNIQNQLKITNLRVNFTKLHTLG
DNLLDSRVEIKEKYYYAMYELVVRGNCFCYGHASECAPIDGIKDEEGMVHGRCVCKHNTK
GLNCELCDDFHSDMPWRPAEGRNTNACKKCNCNGHSNQCHFDMAVYLATGNASGGVCDHC
LHNTMGRNCEMCKPFYYMDPSRDIRDPGICIACDCDPDGSLNGGICDGHDEPSLGMIAGQ
CRCKDHVEGHRCDKCKSGFFGLSAENLRGCQPCQCDPRGTVSESPKCDPVSGDCFCKRLV
TGRSCDQCLPEHWALSHDLNGCRDCDCDVGGATDNHCSMENGQCRCRSHMMGRQCTQVQS
GWYFMALDHYTYEAELAILGQGCSVEQREHQPGRPATWTGTGFAKVPEGSSLEFSINNIP
YSMEYDLLIRYEPQMPRDWGEVRVTIIRPGPIPTSSPCGNTIPADDMLTVSLPVGSRFVV
LPQPVCMERGVTYTLRFEFSGYLDGNSILIIGTTAANILVDSISLLPRYSSLEMFIGGDP
ASIARKQSYERYRCHEGAKSVTRPQISDVCAKLITSMSAIINDGALPCQCDPQGSVSSVC
DMHGGQCRCRPNVIGRRCDQCAPGTYGFGPAGCKSCECNLEGVVTRFCDQLTGQCPCRPG
AFGQRCNGCQAGHWGFPNCKQCLCNGHAEECHQRTGACLNCRDNTGGDKCDRCANSYYGN
PVLGTGNGNQCRPCPCPDGPNSGRHFAASCYQDNRNRQVVCNCNQGYTGGMVKRSEGSFK
RSRCEECAPGYYGNPSQPGGRCQPCRCSNNIDMSDLDACDRRTGECKKCLYNTEGPDCGV
CKSGYYGDASRRNCRKCTCNFLGTEHTQCTARDECVCQRATGQCQCLPNTIGLTCDHCKP
NYWNLASGRGCEACGCDLNNAVNSACNEFTGKCQCRDGFGGKTCTDCQENYWGDPKIQCR
VCDCDRRGIETSQCDQKSGHCVCQQGVSGVRCDQCARGFSGQFPNCQPCHQCFGDWDRVV
QDLAVRTKTLSERALEIQTTGLTGAYEKAFRDLEEKLALAQGIVNARNTTAEAVSSLMEL
IEDLRSQIGETTDTLNSLEGDLTSVQNSNVEASNKLSALEREAKQLNLTSDQLHRQLDIL
KNSNFLGAYDSIRSSYNKSRDAERRANQSTTTTPSTVSQSADTRRKTEHLISAKKDDFNR
KNAVNKRALGDLNAKAQTLDMKKINEKVCGAPGDAPCAESLCGGAGCRDDEGNRHCGGLN
CNGAVAMADNALKRSKHAEKELNKAMGEVEELFHKVADAKTKAEEAKGKAQAALDKATNT
KNKVERSNNDLRDLIKQIRDFLMQEGADPDSIETVANRVLELSIPASPQQIRHLAEEIKD
RVRSLSNVDTILQQTQDDVRKAEQLLQEAKKARNRAEGVKSTAETVKQALEDAKKAQVTA
EKTIQRARADIGETEARLAQIESETSSSEHDLNDAMDRMGNLGREINALKLKRAHNSVAA
ARAEETATMARDKANEAKQILDGELIDKYHTVQELVDRKAKTIQEAKKKAERLRDEAKEL
LKDAQNKLQRLAELEKDYEENQKTLEGKAQQLDGLEDKMKAILNNINKQIQIYNTCQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgtcactggtaatgttcatctgtgccctggcatatgccagcgcccgggagcca
gaccacgcccacggctgtacccatggcagctgttacccggcaacaggagacctgttggtg
ggccgtgagaagagcctgaagacatcatctacatgtggctccaggaagaaagacccctac
tgcatcgtcagtcacttacaggatgagaagaaatgtttccagtgtgactctcgccggcca
tatgatcctgtctacaacaccatcagtcaccgcattgagaacgtcatcaccacgttcaaa
ccacaccgcaagaagtcatggtggcagtcagagaatggaaagcctgatgtcttcattcag
ctggaccttgaggcagaattccattttactcatcttatcatgatcttcaagacatttcgc
ccagcagccatggtgattgagcgatctgcagattttggacgtaactggcaggtgtaccgc
tactttgcctacgactgtgactcggtcttccccggggtatccaagggtcccctgcgcaaa
gtggacgacgtcatctgtgagtcgcgctactctgacattgagccgtccacagagggagag
gctatctacagagttctggaccctgccatccacattgaggacccctacagccccaacatt
cagaaccagctgaagatcactaacctgcgtgtgaacttcaccaagctgcacaccctggga
gataacctgctggactcccgcgtggagatcaaggagaagtactactatgccatgtacgag
ctggtcgtccgcggcaactgcttctgctatggccacgcctccgagtgtgcccccatcgat
gggatcaaggatgaggagggcatggtccatgggaggtgtgtctgcaagcacaacacgaag
ggtctcaactgtgagctgtgtgatgacttccatagcgacatgccctggagaccggctgag
ggacgcaacaccaacgcctgcaagaaatgcaactgtaacggccactccaaccagtgccac
tttgacatggcggtgtacctggccacgggcaatgccagcggtggcgtctgtgaccactgt
ctccacaacaccatgggacgcaactgtgagatgtgtaaaccattctactacatggacccc
agcagggacatcagagacccggggatctgcattgcctgtgactgtgatcctgatggttcc
ctgaacgggggcatctgtgacgggcatgacgagccgtccttgggcatgatcgctgggcag
tgccgctgtaaggaccacgtggaggggcatcgctgtgacaaatgcaagtctggcttcttc
ggcctgagtgcagagaacctccgcgggtgccaaccctgccagtgtgaccccaggggtact
gtgtcagagagcccaaagtgtgaccctgtgagcggggactgcttctgcaagcgactggtc
actggacgcagctgtgaccagtgtctgccagaacattgggcactgagtcacgacctgaat
ggctgcagagactgtgactgtgatgtgggcggagccacagataaccactgctcaatggag
aatgggcagtgccgctgtcgtagtcatatgatgggccgtcaatgtacccaggtgcagtct
gggtggtacttcatggctctggaccactatacctacgaggctgagctcgccatactggga
cagggctgcagtgtggagcagagggagcaccagcctgggcgccctgccacctggactggc
actgggtttgccaaggtcccagagggcagcagcctggagttctccatcaacaacatcccg
tactccatggagtacgacctcctcatccgctatgagccacagatgccacgtgactggggg
gaggtccgtgtgacgatcattcggccagggcccattcccaccagcagcccatgtggaaac
accatccctgcagacgacatgctcactgtgtccctgcctgtaggatccaggtttgtcgtg
ctgcctcaacctgtatgcatggagagaggagtgacctacactcttcgctttgagttcagt
ggctatctggatgggaacagtattctcattatcggtactaccgctgccaacattctagtg
gactctatctccctgctccctcgttactcctccctggagatgttcattggcggtgacccc
gcctccatcgcccggaagcagagctacgagcgctaccgctgccatgagggggccaagagc
gtgacacgcccccagatcagcgacgtctgtgccaaactcatcaccagcatgtcagccatc
attaacgatggagccctgccttgccagtgtgacccccagggctcagtcagctcagtatgt
gacatgcacggaggtcagtgtcgctgtaggccaaacgtgattggacgtcgctgtgaccag
tgtgctcctgggacgtacggctttggacctgcaggatgtaaatcatgtgagtgcaatctg
gaaggtgtggtcactcggttctgtgaccagctgactgggcagtgcccgtgccgcccgggt
gcgtttggccagcggtgcaatggctgccaggcaggacactggggcttccccaactgtaag
caatgcctgtgtaatggacacgctgaggagtgccaccagaggaccggagcctgtctcaac
tgcagggacaacactggaggagacaaatgtgacaggtgtgccaacagttactatggcaac
ccagtgttgggcacaggtaatggtaaccaatgtcggccctgcccctgcccagatggccca
aacagcggacgccacttcgctgcctcctgttaccaggacaaccgcaacagacaagtggtc
tgcaactgtaaccaaggatacacaggggggatggttaagcgctccgagggttccttcaag
cgttcccggtgtgaggagtgcgcccctggttactatggtaacccctcccagccaggtggg
cggtgccagccgtgcagatgcagtaataacattgacatgtcagacctggatgcgtgtgac
cggcggacaggagagtgtaagaagtgtctctacaacacagagggaccagactgtggtgtg
tgcaagagcggttactatggagatgcctcgcgacgcaactgcagaaagtgcacctgtaac
ttcctgggcacagagcatacccagtgtacagcgcgggatgagtgtgtgtgccagcgtgcc
acggggcagtgccagtgtttacccaatactatcggcctgacatgtgaccactgtaagccc
aactactggaacctggctagtgggcggggctgtgaggcctgcggctgtgacctcaacaac
gctgtcaactctgcttgcaacgagttcactggaaagtgtcagtgtcgtgatggattcggt
gggaagacctgcacagactgccaagagaactactggggagaccccaagatccagtgcaga
gtctgtgactgtgaccgccggggcatagagacctcccagtgtgaccagaagtcaggccac
tgtgtgtgtcagcagggggtgtcgggcgtgcgctgtgaccagtgtgcccggggcttctca
ggccagttccctaactgccagccctgccaccagtgcttcggggactgggaccgggtggtg
caggacctggctgtccgcaccaagaccctgtcggagcgggctctagagatccagaccacg
ggcctgactggagcctatgagaaggccttcagagacctggaggagaagctggcactggcc
cagggcatcgtcaacgcccgcaacaccaccgcagaggcagtcagcagcctgatggagctc
attgaagacctcaggtctcagataggggagaccacagacacactgaatagtctggaggga
gacctgaccagtgtgcagaacagcaacgttgaggccagtaataagctcagtgctctggag
agagaggccaaacagctgaacctgacctcagatcagctccaccgtcaactagacatcctc
aagaactccaacttcctgggtgcatatgacagcatccgcagctcctataacaagtcccgt
gatgcagagcggcgagccaaccagtcaaccaccaccacgcccagcactgtcagccaatca
gcagacacacgccgcaagacagaacacctcatctctgccaagaaagatgacttcaaccgt
aagaacgctgtcaacaagcgagccctgggggacctcaatgcaaaggcacagactctggac
atgaagaagatcaacgagaaggtctgtggggcccctggcgatgccccctgtgcagagagc
ctttgcggaggagcaggttgccgtgatgatgaggggaacaggcactgcggaggcctgaac
tgcaacggtgccgtagcgatggcagataacgccctgaagaggtctaagcatgcagaaaaa
gagctgaacaaagccatgggggaggtagaggagctcttccacaaggtggcagatgccaag
accaaggcggaggaggcgaaaggtaaagcccaggcagctctggacaaggccaccaacacc
aagaacaaggtggagcgctccaacaatgacctgcgagacctcataaagcagatccgggac
ttcctcatgcaggagggtgctgatccagacagcattgagacggtggccaaccgtgtcctg
gagctgtccattccagcctcaccccagcagatcagacacctggcagaggagatcaaggac
cgggtccgaagcctctccaacgtagacaccattctgcaacagacacaggatgatgtgcgc
aaagcagagcagctgctgcaggaggccaagaaggccaggaatcgggcagagggggtgaaa
tccacagcagagacggtgaaacaggcacttgaggatgctaagaaggcccaggtcacagcg
gagaagaccatacagcgggctagggctgacattggtgaaacggaagcccgactagcacag
attgagtctgagacctccagcagtgaacatgacctgaatgatgccatggaccgcatgggc
aacctaggtcgggagattaatgctctgaagctcaaacgtgcccacaacagcgtggcagca
gctcgagctgaggagacagccactatggcacgtgacaaagccaatgaggccaagcagatt
ttagatggcgagttgatagataagtatcacacagtgcaggagttggtggacaggaaagcc
aagaccatccaggaggcgaagaagaaagcagagcgcctgagagatgaagccaaagagcta
ctgaaggatgcccagaacaagctccagagactagcagagctagagaaagactatgaagag
aaccagaaaactttggagggcaaagcccagcagttggatggcctagaagacaagatgaag
gctatcctcaacaacatcaacaagcagatccagatctacaacacttgtcagtaa
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integrated database retrieval system
