Coregonus clupeaformis (lake whitefish): 121538337
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Entry
121538337 CDS
T08357
Symbol
usp19
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X1
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121538337 (usp19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121538337 (usp19)
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121538337 (usp19)
Peptidases and inhibitors [BR:
cclu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121538337 (usp19)
Ubiquitin system [BR:
cclu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121538337 (usp19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
USP7_C2
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
121538337
NCBI-ProteinID:
XP_041702162
LinkDB
All DBs
Position
24:complement(30053277..30089398)
Genome browser
AA seq
1499 aa
AA seq
DB search
MASSSESGRRNGGQRSAGDNTSKKKQKDRANQESREAKRAAAAGANAEHKKDVFVDWKQN
ANEVTVRLRCGEGFQSVEDVTTTFTDTDCQACFPDGRQWDCHLQEEIEGSCSKVQYKEKG
GFLLLVMQKKIPFHSWPSLMQNKKEKEPVQAKNGKEQKPPPVVKPEKSVPETADKPKLST
QPSAPPAQSEQRCGKAERGVKRTMKNKPAADRPESGVKAAGEGQTKPVSKGDLPQEPSAK
RTVRPPKASKDSTSQTPRDTHPKSTANGKPHTPTPTGRDPQTYTAGDNRADRLGNGHECT
TPEMAFSHTQQEMKVQLEKDPESDFKAGAEEERIPAATLSSAVSSHKAEDSTSRTERQGE
AEAERTESSTVVRKSQDEADQATLTPTQQSGPESGEPVTATPTKQAEFPSRSSTEEEKKD
RSKEEPLDIKQLEEAVPEPMVNLNFVKNDSYEKGTDLMVVNVYMKGICRETARVIFREQD
FTLIFQTSDANLLRLHADCGANTVFKWQVKLRNLIQPEQSTYAFTPSRLDITLKKRHSQR
WGGLEAPATQGAVGGAKVAVPSVPSSQTSQPGSSQHTLPAKEEPPRAEDGGLDNVSARTV
SDHSPIKQESAVTPKPTCMVQPMTHAPPAGSERSVEEEEKKVCLPGFTGLVNLGNTCFMN
SVIQSLSNTRELRDYFHDRAFETEINCNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSK
LKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRLDEVGEIE
VVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPMCSKVSITFDPFLYLPVPLPQKQKVLT
VFYFAKEPHKQPIKFLVSVSKDNSSTAEVLDSISRSVRIKAENLRLAEVVKSYFHRIFLP
SHSLDTVSSSDMLFCFEVLSKELAKERVVVLRVQQRPQVPSIPISKCAACLKPPFSEEEK
LKRCTRCYRVGYCNQACQKNHWSNHKVLCRPNIENVGLPFLVSVPESRLTYARLSQLLEG
YSRYSVNVFQPPFQSGRTSPEATQCRADLPPPAETPEGVGPGDEARGGGAGDSDQESPFL
VPESPLETAQASVHLAEDPDALSTRTTDSGFSEPSCCSQDPQGEKETSCEKAVRPEAAVT
GYQQPSESASSHASQFYISVLDSNGKEQKLEEKEEAVLDLPEESTLALVWKNNERLKEYV
LVRSKELDFKEDPGSVSETARAGHFTLEQCLNLFTRPEVLAPEEAWYCPKCQQHREASKQ
LLLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPIRNLDLSKFCIGQKDDMQQPPIYDL
YAVINHYGGMIGGHYTAYARLPSAQNSQRSDVGWRLFDDSTVTTVEESQVVTRYAYVLFY
RRRNSPVERPPRFLGPLGIESPTAAGATASQASLIWQELEEEEEGLEEGPRGLFRTRLGR
RRAARRREEEVEGVEGQVRRRRQRISDYSDDDCIRYLVLGTLAALLALFLDLLYRANWG
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcagtgaatcaggccggcggaatgggggtcagcgcagcgctggtgacaac
accagcaagaagaagcagaaggacagggccaaccaggagagcagggaggccaagcgagca
gcagcagcaggggccaatgcagagcacaagaaagatgtgtttgtggactggaagcagaat
gcgaatgaggtgacagtgaggctgcgctgtggagaggggtttcagagtgtggaggacgtc
accactaccttcactgacacagactgtcaggcctgcttcccagatgggcgccagtgggac
tgtcacctgcaggaggagattgagggctcctgcagcaaagtgcagtacaaagagaagggt
ggcttcctgcttttggtcatgcagaagaagatcccctttcactcctggccctcccttatg
caaaataaaaaggagaaggagcctgtgcaggccaagaatggcaaagagcagaaaccgccg
cctgtggtaaagccagagaaatctgtccctgagactgcagataagcccaaactgtccacc
cagccatctgctccaccggcacagagcgaacagaggtgtggcaaagcagagcgaggtgtc
aaacgcaccatgaagaacaaaccagcagcagacaggccagagtctggggtgaaggctgca
ggagaggggcagaccaagcctgtcagtaaaggggacctgcctcaggagcctagtgccaag
cgcaccgtccgtccccccaaggcctccaaggactctacttcacagactcccagggataca
caccccaagtccacagccaatgggaaaccgcacacccccactcccactggccgagacccc
cagacgtatacagctggtgacaatcgtgctgacaggctaggcaacggtcatgagtgtaca
acacccgagatggccttcagccacacacagcaggagatgaaagttcagctggagaaggac
ccagagtctgatttcaaggctggggcagaagaggaacgcataccggcagccactttgtcc
agtgctgtgagcagccacaaggctgaagactccactagcagaacagagaggcaaggggag
gctgaggctgagaggactgagtcctctacggtagtgagaaagtcccaggatgaggctgac
caggccactctaacaccaacccagcagtcaggaccagaatcaggggagcctgtgactgca
acacctaccaagcaggctgagttccccagcaggagcagtacagaggaggagaagaaggac
cggtctaaagaggaacctctggacattaagcagctggaggaagcagttccagagccaatg
gtgaacctgaattttgtgaagaacgactcgtacgagaaagggacagacctaatggtggtc
aacgtgtacatgaagggcatctgcagagagacggccagggtgatcttcagggaacaggac
ttcaccctcatcttccagaccagcgatgcaaatttattgcgccttcatgcggactgcgga
gcaaatacagtatttaagtggcaagtcaaactcaggaacctcatccagcctgagcagtct
acgtatgccttcaccccgtcccgtttagacatcactctgaagaagagacacagccagcgc
tgggggggcctggaggcccctgctacacaaggtgcagtggggggcgccaaggttgctgtg
ccatccgtgccgtcatctcagacgagtcagccgggcagcagccagcacaccctccctgcc
aaggaggagcccccccgggcagaggacggaggccttgacaatgtgtcagcccgcaccgtc
tcagaccattcccctatcaaacaggagtctgcagtcacgcccaagcccacctgtatggtc
cagcccatgacccacgcgcctcctgctggcagtgagcgcagtgttgaggaggaggagaag
aaggtgtgtctgccaggcttcacaggcctggtcaacctgggcaacacctgtttcatgaac
agcgtcatccagtctctgtccaacacccgagaactcagggactactttcatgaccgtgcg
tttgaaactgagatcaactgtaataacccattggggacgggtggtcggctggccatcggg
tttgctgtgttgctgcgggctctgtggaagggtacccaccatgctttccagccctcgaag
ttaaaggcgatcgtggccagtaaggccagccagtttacaggctatgcccagcacgatgcc
caggagttcatggccttcctcctggatggtctccatgaggacctgaaccgcatccagaac
aagccctacacagagacggtggactcagatggacggctggacgaggtgggtgaaatagag
gtggtcgcagaggaggcgtggcagaggcacaagatgaggaacgactcgttcatcgtggac
ctcttccagggccagtacaagtccaagctcgtctgccctatgtgctccaaggtttccata
acctttgaccccttcctctacctgcccgtgcccctgccacagaagcagaaggtcctcact
gtgttctactttgctaaagagcctcacaagcaacccatcaagttcctggtgagtgtgagt
aaggataactcgagcacagccgaggtcctggactcaatctctcggagtgtgaggatcaag
gcagagaacctgagactggctgaggtggtgaagagttacttccacaggattttcctcccc
tcccactccctggacacggtctcctcctcagacatgctcttctgcttcgaggtgctgtct
aaagagctggccaaggagagggtggtggtgctcagagtccagcagaggcctcaggtccct
agtatccctatttccaagtgtgctgcctgcctgaagcctcccttctcagaggaagagaag
ctgaagcgctgcacccgctgctaccgcgtgggctactgcaaccaggcttgccagaaaaat
cattggtccaaccataaggttctgtgtcgccccaacattgagaacgtggggcttccattc
ctggtcagcgtccctgagtccagactcacctacgcccgtctgtcccagctgctggaagga
tactcaaggtattcagtgaacgtgttccagcctcccttccagtctggcaggacgtcccca
gaggccacccagtgccgggctgacctcccccctccagcagagacccctgagggtgtgggg
ccaggggatgaggccaggggcggtggggcaggggactctgatcaggagagcccctttctg
gtccctgagtctccattagaaacagcccaggcttcagtacacctagccgaagacccagac
gctctctccacccgcaccacagactctggcttctctgagccatcctgctgctcccaggac
ccccagggagagaaggagacctcctgtgagaaggctgtcaggccagaagctgcagtgaca
ggttaccagcaaccctcagagtctgcgtccagccatgcttctcagttctacatctccgtc
ctcgactccaacggcaaggagcagaaactggaggaaaaagaagaggccgttctggacctc
cctgaggaatccacactggcactagtgtggaagaacaacgagcgtctcaaggagtatgtg
ctggtccggtccaaggagctggactttaaggaggaccctgggtcggtcagtgagacggcc
agggctggacacttcaccctggagcagtgcctcaacctcttcactaggcctgaggtgctg
gcaccagaggaggcatggtactgtccaaagtgccagcagcacagggaagcctccaagcag
ctgctgctgtggcgtctgcccaacgtcctcatcatccagctcaaacgcttctccttccgc
agcttcatctggagggacaagatcaacgacatggtcgacttcccaatcaggaacctggac
ctcagtaaattctgtattggtcagaaggacgacatgcagcagccgccaatctatgacctc
tatgcggtcattaatcactacgggggcatgatcggaggtcactacaccgcctacgcacgc
ctgcccagtgcccaaaacagccagcgcagtgatgtcggctggcgtctgtttgatgacagc
acagtgacgacagtcgaggagagtcaggtggtgacgcgctatgcctacgtgctgttctac
cgccgccgcaactcccctgtggaacgaccacctcgcttcctggggcccctcgggatcgag
tcccccaccgctgcaggagccaccgccagccaggcctctctaatatggcaggaactggag
gaggaagaggagggtcttgaggagggcccccggggcctgttccgcaccaggctggggaga
agaagagcagccagaaggagggaggaggaagtggagggggtggaggggcaggtgcgacgg
cggcgccaaaggatctctgattattccgatgacgactgcatccgatatttggtcctgggc
accttggctgctctgctagcgttgttcctggacctgctctacagagccaactggggctaa
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integrated database retrieval system
